RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 STXBP5LQ9Y2K9 1186 aa7.42□□□□□ -1.22
ERCC1-216ENST00000592444 RTCBQ9Y3I0 505 aaKnown RBP7.42□□□□□ -1.22
ERCC1-216ENST00000592444 RNF123Q5XPI4 1314 aa7.42□□□□□ -1.22
ERCC1-216ENST00000592444 MUC3AQ02505 3323 aa7.41□□□□□ -1.22
ERCC1-216ENST00000592444 LOC102724428A0A0B4J2F2 783 aa7.41□□□□□ -1.22
ERCC1-216ENST00000592444 CELF2O95319 508 aaKnown RBP7.41□□□□□ -1.22
ERCC1-216ENST00000592444 EN2P19622 333 aaPredicted RBP7.41□□□□□ -1.22
ERCC1-216ENST00000592444 RFC4P35249 363 aa7.41□□□□□ -1.22
ERCC1-216ENST00000592444 SIK1P57059 783 aa7.41□□□□□ -1.22
ERCC1-216ENST00000592444 PPP1R15BQ5SWA1 713 aa7.41□□□□□ -1.22
ERCC1-216ENST00000592444 FBXO46Q6PJ61 603 aaPredicted RBP7.41□□□□□ -1.22
ERCC1-216ENST00000592444 C21orf2O43822 256 aa7.4□□□□□ -1.22
ERCC1-216ENST00000592444 PDE4AP27815 886 aa7.4□□□□□ -1.22
ERCC1-216ENST00000592444 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
ERCC1-216ENST00000592444 IRX2Q9BZI1 471 aaPredicted RBP7.4□□□□□ -1.22
ERCC1-216ENST00000592444 TAOK3Q9H2K8 898 aa7.4□□□□□ -1.22
ERCC1-216ENST00000592444 ZNF541Q9H0D2 1346 aa7.4□□□□□ -1.22
ERCC1-216ENST00000592444 NFAT5O94916 1531 aa7.4□□□□□ -1.22
ERCC1-216ENST00000592444 LAMB4A4D0S4 1761 aa7.39□□□□□ -1.23
ERCC1-216ENST00000592444 SCN11AQ9UI33 1791 aa7.39□□□□□ -1.23
ERCC1-216ENST00000592444 GOLGA8CPA6NN73 597 aa7.39□□□□□ -1.23
ERCC1-216ENST00000592444 GTPBP6O43824 516 aaPredicted RBP7.39□□□□□ -1.23
ERCC1-216ENST00000592444 ATP6V1AP38606 617 aa7.39□□□□□ -1.23
ERCC1-216ENST00000592444 KIF23Q02241 960 aaPredicted RBP7.39□□□□□ -1.23
ERCC1-216ENST00000592444 HTTP42858 3142 aa7.39□□□□□ -1.23
ERCC1-216ENST00000592444 FER1L6Q2WGJ9 1857 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 PAPPA2Q9BXP8 1791 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 ADGRB1O14514 1584 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 INSRP06213 1382 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 LTBP3Q9NS15 1303 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 POLRMTO00411 1230 aaKnown RBP7.38□□□□□ -1.23
ERCC1-216ENST00000592444 Q7L0L9 218 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 C2CD5Q86YS7 1000 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 DEFB123Q8N688 67 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 ZNF408Q9H9D4 720 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 SRP68Q9UHB9 627 aaKnown RBP7.38□□□□□ -1.23
ERCC1-216ENST00000592444 VPS9D1Q9Y2B5 631 aa7.38□□□□□ -1.23
ERCC1-216ENST00000592444 MAP2P11137 1827 aaKnown RBP7.38□□□□□ -1.23
ERCC1-216ENST00000592444 INTS3Q68E01 1043 aaKnown RBP7.37□□□□□ -1.23
ERCC1-216ENST00000592444 ZNF296Q8WUU4 475 aaPredicted RBP7.37□□□□□ -1.23
ERCC1-216ENST00000592444 PIGBQ92521 554 aa7.37□□□□□ -1.23
ERCC1-216ENST00000592444 LTV1Q96GA3 475 aaPredicted RBP7.37□□□□□ -1.23
ERCC1-216ENST00000592444 PRO3102Q9H379 93 aa7.37□□□□□ -1.23
ERCC1-216ENST00000592444 AKAP11Q9UKA4 1901 aa7.37□□□□□ -1.23
ERCC1-216ENST00000592444 KIAA0100Q14667 2235 aaKnown RBP7.36□□□□□ -1.23
ERCC1-216ENST00000592444 TMEM265A0A087WTH1 108 aa7.36□□□□□ -1.23
ERCC1-216ENST00000592444 FAM155AB1AL88 458 aaPredicted RBP7.36□□□□□ -1.23
ERCC1-216ENST00000592444 H0YIN7 160 aa7.36□□□□□ -1.23
ERCC1-216ENST00000592444 ITGAEP38570 1179 aa7.36□□□□□ -1.23
ERCC1-216ENST00000592444 ZNF454Q8N9F8 522 aa7.36□□□□□ -1.23
ERCC1-216ENST00000592444 TTC28Q96AY4 2481 aa7.36□□□□□ -1.23
ERCC1-216ENST00000592444 DLEC1Q9Y238 1755 aa7.36□□□□□ -1.23
ERCC1-216ENST00000592444 EYSQ5T1H1 3165 aa7.35□□□□□ -1.23
ERCC1-216ENST00000592444 LOC105371045A0A1W2PR82 267 aa7.35□□□□□ -1.23
ERCC1-216ENST00000592444 HUNKP57058 714 aa7.35□□□□□ -1.23
ERCC1-216ENST00000592444 MAP3K12Q12852 859 aa7.35□□□□□ -1.23
ERCC1-216ENST00000592444 ZNF622Q969S3 477 aaKnown RBP eCLIP7.35□□□□□ -1.23
ERCC1-216ENST00000592444 CSRNP1Q96S65 589 aa7.35□□□□□ -1.23
ERCC1-216ENST00000592444 CABP1Q9NZU7 370 aa7.35□□□□□ -1.23
ERCC1-216ENST00000592444 LAMA2P24043 3122 aaKnown RBP7.34□□□□□ -1.23
ERCC1-216ENST00000592444 USP31Q70CQ4 1352 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 TTC21BQ7Z4L5 1316 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 SYNGAP1Q96PV0 1343 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 RPS6KA4O75676 772 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 TM4SF1P30408 202 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 FOSBP53539 338 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 SRPK2P78362 688 aaKnown RBP7.34□□□□□ -1.23
ERCC1-216ENST00000592444 RGMBQ6NW40 437 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 LARP6Q9BRS8 491 aaKnown RBP7.34□□□□□ -1.23
ERCC1-216ENST00000592444 SLC4A5Q9BY07 1137 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 BCL2L12Q9HB09 334 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 MTMR10Q9NXD2 777 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 ASAP1Q9ULH1 1129 aa7.34□□□□□ -1.23
ERCC1-216ENST00000592444 RBBP6Q7Z6E9 1792 aaKnown RBP7.33□□□□□ -1.24
ERCC1-216ENST00000592444 PPEF1O14829 653 aaPredicted RBP7.33□□□□□ -1.24
ERCC1-216ENST00000592444 TBC1D8O95759 1140 aa7.33□□□□□ -1.24
ERCC1-216ENST00000592444 EPS15P42566 896 aa7.33□□□□□ -1.24
ERCC1-216ENST00000592444 THSD4Q6ZMP0 1018 aa7.33□□□□□ -1.24
ERCC1-216ENST00000592444 GPC2Q8N158 579 aa7.33□□□□□ -1.24
ERCC1-216ENST00000592444 MRPL50Q8N5N7 158 aaKnown RBP7.33□□□□□ -1.24
ERCC1-216ENST00000592444 WNT2BQ93097 391 aa7.33□□□□□ -1.24
ERCC1-216ENST00000592444 DDX27Q96GQ7 796 aaKnown RBP7.33□□□□□ -1.24
ERCC1-216ENST00000592444 GLIS2Q9BZE0 524 aaPredicted RBP7.33□□□□□ -1.24
ERCC1-216ENST00000592444 ITGB4P16144 1822 aa7.33□□□□□ -1.24
ERCC1-216ENST00000592444 USP42Q9H9J4 1324 aaKnown RBP7.32□□□□□ -1.24
ERCC1-216ENST00000592444 PRUNE2Q8WUY3 3088 aa7.32□□□□□ -1.24
ERCC1-216ENST00000592444 PTPREP23469 700 aa7.32□□□□□ -1.24
ERCC1-216ENST00000592444 LMOD1P29536 600 aaPredicted RBP7.32□□□□□ -1.24
ERCC1-216ENST00000592444 MFSD10Q14728 455 aa7.32□□□□□ -1.24
ERCC1-216ENST00000592444 RC3H1Q5TC82 1133 aaKnown RBP7.32□□□□□ -1.24
ERCC1-216ENST00000592444 USP50Q70EL3 339 aaPredicted RBP7.32□□□□□ -1.24
ERCC1-216ENST00000592444 CCDC102AQ96A19 550 aa7.32□□□□□ -1.24
ERCC1-216ENST00000592444 LTN1O94822 1766 aa7.31□□□□□ -1.24
ERCC1-216ENST00000592444 A0A1W2PPC1 479 aa7.31□□□□□ -1.24
ERCC1-216ENST00000592444 EVI5O60447 810 aa7.31□□□□□ -1.24
ERCC1-216ENST00000592444 ZNF157P51786 506 aaPredicted RBP7.31□□□□□ -1.24
ERCC1-216ENST00000592444 SMG6Q86US8 1419 aaKnown RBP7.31□□□□□ -1.24
ERCC1-216ENST00000592444 DPF3Q92784 378 aa7.31□□□□□ -1.24
ERCC1-216ENST00000592444 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
ERCC1-216ENST00000592444 ZNF277Q9NRM2 450 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms