RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 PIM2Q9P1W9 311 aa23.91■■□□□ 1.42
TCF3-216ENST00000592395 ARFGEF1Q9Y6D6 1849 aa23.9■■□□□ 1.42
TCF3-216ENST00000592395 H0YIN7 160 aa23.9■■□□□ 1.42
TCF3-216ENST00000592395 RIC3Q7Z5B4 369 aa23.9■■□□□ 1.42
TCF3-216ENST00000592395 C2CD5Q86YS7 1000 aa23.9■■□□□ 1.42
TCF3-216ENST00000592395 CDCA7LQ96GN5 454 aa23.9■■□□□ 1.42
TCF3-216ENST00000592395 NTSR2O95665 410 aa23.89■■□□□ 1.41
TCF3-216ENST00000592395 BCS1LQ9Y276 419 aa23.89■■□□□ 1.41
TCF3-216ENST00000592395 CHD4Q14839 1912 aa23.88■■□□□ 1.41
TCF3-216ENST00000592395 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.41
TCF3-216ENST00000592395 NLRP10Q86W26 655 aa23.88■■□□□ 1.41
TCF3-216ENST00000592395 TRMT2AQ8IZ69 625 aaKnown RBP23.88■■□□□ 1.41
TCF3-216ENST00000592395 RIC1Q4ADV7 1423 aa23.87■■□□□ 1.41
TCF3-216ENST00000592395 NUTM1Q86Y26 1132 aa23.87■■□□□ 1.41
TCF3-216ENST00000592395 ISCA1Q9BUE6 129 aa23.87■■□□□ 1.41
TCF3-216ENST00000592395 UTP14AQ9BVJ6 771 aaKnown RBP23.87■■□□□ 1.41
TCF3-216ENST00000592395 ABCC12Q96J65 1359 aa23.87■■□□□ 1.41
TCF3-216ENST00000592395 RNF123Q5XPI4 1314 aa23.86■■□□□ 1.41
TCF3-216ENST00000592395 TNRC6CQ9HCJ0 1690 aaKnown RBP23.86■■□□□ 1.41
TCF3-216ENST00000592395 ERFEQ4G0M1 354 aa23.86■■□□□ 1.41
TCF3-216ENST00000592395 DALRD3Q5D0E6 543 aaKnown RBP23.86■■□□□ 1.41
TCF3-216ENST00000592395 KLRG2A4D1S0 409 aaPredicted RBP23.85■■□□□ 1.41
TCF3-216ENST00000592395 KSR2Q6VAB6 950 aa23.85■■□□□ 1.41
TCF3-216ENST00000592395 G2E3Q7L622 706 aa23.85■■□□□ 1.41
TCF3-216ENST00000592395 ATP5J2-PTCD1G3V325 749 aa23.84■■□□□ 1.41
TCF3-216ENST00000592395 SRGNP10124 158 aa23.84■■□□□ 1.41
TCF3-216ENST00000592395 FLIIQ13045 1269 aa23.84■■□□□ 1.41
TCF3-216ENST00000592395 TRIM28Q13263 835 aaKnown RBP23.84■■□□□ 1.41
TCF3-216ENST00000592395 GOLGB1Q14789 3259 aaKnown RBP23.83■■□□□ 1.41
TCF3-216ENST00000592395 ADCY9O60503 1353 aa23.83■■□□□ 1.41
TCF3-216ENST00000592395 PI4KAP2A4QPH2 592 aa23.83■■□□□ 1.41
TCF3-216ENST00000592395 TTLL6Q8N841 843 aa23.83■■□□□ 1.41
TCF3-216ENST00000592395 PI4KAP1Q8N8J0 262 aa23.83■■□□□ 1.41
TCF3-216ENST00000592395 ZNF622Q969S3 477 aaKnown RBP eCLIP23.83■■□□□ 1.41
TCF3-216ENST00000592395 MASTLQ96GX5 879 aa23.83■■□□□ 1.41
TCF3-216ENST00000592395 METTL22Q9BUU2 404 aaPredicted RBP23.83■■□□□ 1.41
TCF3-216ENST00000592395 MAP3K2Q9Y2U5 619 aa23.83■■□□□ 1.41
TCF3-216ENST00000592395 CACNA1SQ13698 1873 aa23.82■■□□□ 1.4
TCF3-216ENST00000592395 STYK1Q6J9G0 422 aa23.82■■□□□ 1.4
TCF3-216ENST00000592395 MYD88Q99836 296 aa23.82■■□□□ 1.4
TCF3-216ENST00000592395 TRMT112Q9UI30 125 aaKnown RBP23.82■■□□□ 1.4
TCF3-216ENST00000592395 SH3TC1Q8TE82 1336 aa23.82■■□□□ 1.4
TCF3-216ENST00000592395 FKBP5Q13451 457 aaPredicted RBP23.81■■□□□ 1.4
TCF3-216ENST00000592395 ZNF428Q96B54 188 aa23.81■■□□□ 1.4
TCF3-216ENST00000592395 NPR1P16066 1061 aa23.8■■□□□ 1.4
TCF3-216ENST00000592395 SLC10A5Q5PT55 438 aa23.8■■□□□ 1.4
TCF3-216ENST00000592395 CNKSR1Q969H4 720 aa23.8■■□□□ 1.4
TCF3-216ENST00000592395 LAMB2P55268 1798 aa23.79■■□□□ 1.4
TCF3-216ENST00000592395 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
TCF3-216ENST00000592395 CRY2Q49AN0 593 aa23.79■■□□□ 1.4
TCF3-216ENST00000592395 CCDC191Q8NCU4 936 aa23.79■■□□□ 1.4
TCF3-216ENST00000592395 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
TCF3-216ENST00000592395 NEXNQ0ZGT2 675 aa23.78■■□□□ 1.4
TCF3-216ENST00000592395 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
TCF3-216ENST00000592395 ZBED9Q6R2W3 1325 aa23.77■■□□□ 1.4
TCF3-216ENST00000592395 SLX4Q8IY92 1834 aa23.77■■□□□ 1.4
TCF3-216ENST00000592395 DNAAF4Q8WXU2 420 aa23.76■■□□□ 1.39
TCF3-216ENST00000592395 CWC25Q9NXE8 425 aaPredicted RBP23.76■■□□□ 1.39
TCF3-216ENST00000592395 UTRNP46939 3433 aa23.75■■□□□ 1.39
TCF3-216ENST00000592395 IGKV5-2P06315 115 aa23.75■■□□□ 1.39
TCF3-216ENST00000592395 POLA2Q14181 598 aa23.75■■□□□ 1.39
TCF3-216ENST00000592395 ALDH1L2Q3SY69 923 aa23.75■■□□□ 1.39
TCF3-216ENST00000592395 PRPF40BQ6NWY9 871 aaKnown RBP23.75■■□□□ 1.39
TCF3-216ENST00000592395 ARHGAP27Q6ZUM4 889 aa23.75■■□□□ 1.39
TCF3-216ENST00000592395 SYNE4Q8N205 404 aa23.75■■□□□ 1.39
TCF3-216ENST00000592395 ZBTB38Q8NAP3 1195 aaPredicted RBP23.75■■□□□ 1.39
TCF3-216ENST00000592395 RPGRQ92834 1020 aaKnown RBP23.75■■□□□ 1.39
TCF3-216ENST00000592395 FAM89AQ96GI7 184 aa23.75■■□□□ 1.39
TCF3-216ENST00000592395 HCLS1P14317 486 aaPredicted RBP23.74■■□□□ 1.39
TCF3-216ENST00000592395 YY1P25490 414 aa23.74■■□□□ 1.39
TCF3-216ENST00000592395 ALDH1B1P30837 517 aa23.74■■□□□ 1.39
TCF3-216ENST00000592395 MRPL50Q8N5N7 158 aaKnown RBP23.74■■□□□ 1.39
TCF3-216ENST00000592395 SSH1Q8WYL5 1049 aa23.74■■□□□ 1.39
TCF3-216ENST00000592395 HOXA10P31260 410 aaPredicted RBP23.73■■□□□ 1.39
TCF3-216ENST00000592395 C3orf67Q6ZVT6 689 aa23.73■■□□□ 1.39
TCF3-216ENST00000592395 NEURL1BA8MQ27 555 aa23.72■■□□□ 1.39
TCF3-216ENST00000592395 PCCAP05165 728 aaPredicted RBP23.72■■□□□ 1.39
TCF3-216ENST00000592395 HSP90B1P14625 803 aaKnown RBP23.71■■□□□ 1.39
TCF3-216ENST00000592395 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
TCF3-216ENST00000592395 RTL5Q5HYW3 569 aaPredicted RBP23.71■■□□□ 1.39
TCF3-216ENST00000592395 LINS1Q8NG48 757 aa23.71■■□□□ 1.39
TCF3-216ENST00000592395 RBM17Q96I25 401 aaKnown RBP23.71■■□□□ 1.39
TCF3-216ENST00000592395 PTPRCP08575 1304 aa23.7■■□□□ 1.38
TCF3-216ENST00000592395 F6X3S4 739 aa23.7■■□□□ 1.38
TCF3-216ENST00000592395 IRS4O14654 1257 aaPredicted RBP23.7■■□□□ 1.38
TCF3-216ENST00000592395 C21orf2O43822 256 aa23.7■■□□□ 1.38
TCF3-216ENST00000592395 CRAMP1Q96RY5 1269 aa23.7■■□□□ 1.38
TCF3-216ENST00000592395 SMC4Q9NTJ3 1288 aa23.7■■□□□ 1.38
TCF3-216ENST00000592395 FER1L6Q2WGJ9 1857 aa23.7■■□□□ 1.38
TCF3-216ENST00000592395 SOGA3Q5TF21 947 aa23.69■■□□□ 1.38
TCF3-216ENST00000592395 BCL2L13Q9BXK5 485 aa23.69■■□□□ 1.38
TCF3-216ENST00000592395 SBF1O95248 1867 aa23.68■■□□□ 1.38
TCF3-216ENST00000592395 CDHR2Q9BYE9 1310 aa23.68■■□□□ 1.38
TCF3-216ENST00000592395 GCKRQ14397 625 aa23.67■■□□□ 1.38
TCF3-216ENST00000592395 SF3B3Q15393 1217 aaKnown RBP23.67■■□□□ 1.38
TCF3-216ENST00000592395 BEND3Q5T5X7 828 aa23.67■■□□□ 1.38
TCF3-216ENST00000592395 C7orf43Q8WVR3 580 aa23.67■■□□□ 1.38
TCF3-216ENST00000592395 MYH3P11055 1940 aa23.67■■□□□ 1.38
TCF3-216ENST00000592395 ABCC4O15439 1325 aa23.65■■□□□ 1.38
TCF3-216ENST00000592395 RARSP54136 660 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms