RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
SMARCA4-218ENST00000592158 HIRAP54198 1017 aaPredicted RBP12.66□□□□□ -0.38
SMARCA4-218ENST00000592158 POLR2AP24928 1970 aaKnown RBP12.66□□□□□ -0.38
SMARCA4-218ENST00000592158 SLC4A8Q2Y0W8 1093 aa12.65□□□□□ -0.38
SMARCA4-218ENST00000592158 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
SMARCA4-218ENST00000592158 R3HDMLQ9H3Y0 253 aa12.65□□□□□ -0.38
SMARCA4-218ENST00000592158 PTPN22Q9Y2R2 807 aa12.65□□□□□ -0.38
SMARCA4-218ENST00000592158 COL15A1P39059 1388 aa12.65□□□□□ -0.38
SMARCA4-218ENST00000592158 EDC4Q6P2E9 1401 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-218ENST00000592158 RPTORQ8N122 1335 aa12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 ERVV-2B6SEH9 535 aa12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 TNFRSF10AO00220 468 aa12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 TRPM4Q8TD43 1214 aa12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 ZNF333Q96JL9 665 aa12.63□□□□□ -0.39
SMARCA4-218ENST00000592158 NPHP1O15259 732 aa12.62□□□□□ -0.39
SMARCA4-218ENST00000592158 LARGE2Q8N3Y3 721 aa12.62□□□□□ -0.39
SMARCA4-218ENST00000592158 COG3Q96JB2 828 aa12.62□□□□□ -0.39
SMARCA4-218ENST00000592158 PSMD1Q99460 953 aa12.62□□□□□ -0.39
SMARCA4-218ENST00000592158 NR2E3Q9Y5X4 410 aa12.62□□□□□ -0.39
SMARCA4-218ENST00000592158 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-218ENST00000592158 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-218ENST00000592158 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-218ENST00000592158 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-218ENST00000592158 CNBD1Q8NA66 436 aa12.61□□□□□ -0.39
SMARCA4-218ENST00000592158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.39
SMARCA4-218ENST00000592158 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 NPR1P16066 1061 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 TM4SF4P48230 202 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 ST5P78524 1137 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 CFHR5Q9BXR6 569 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 STAP2Q9UGK3 403 aa12.6□□□□□ -0.39
SMARCA4-218ENST00000592158 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
SMARCA4-218ENST00000592158 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
SMARCA4-218ENST00000592158 CABP4P57796 275 aa12.58□□□□□ -0.4
SMARCA4-218ENST00000592158 NIM1KQ8IY84 436 aa12.58□□□□□ -0.4
SMARCA4-218ENST00000592158 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
SMARCA4-218ENST00000592158 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
SMARCA4-218ENST00000592158 MRC1P22897 1456 aa12.58□□□□□ -0.4
SMARCA4-218ENST00000592158 TMC1Q8TDI8 760 aa12.57□□□□□ -0.4
SMARCA4-218ENST00000592158 HTATIP2Q9BUP3 242 aa12.57□□□□□ -0.4
SMARCA4-218ENST00000592158 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
SMARCA4-218ENST00000592158 CXCL9Q07325 125 aa12.56□□□□□ -0.4
SMARCA4-218ENST00000592158 NBPF11Q86T75 865 aa12.56□□□□□ -0.4
SMARCA4-218ENST00000592158 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
SMARCA4-218ENST00000592158 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
SMARCA4-218ENST00000592158 CYP19A1P11511 503 aaPredicted RBP12.55□□□□□ -0.4
SMARCA4-218ENST00000592158 LRIT3Q3SXY7 679 aa12.55□□□□□ -0.4
SMARCA4-218ENST00000592158 ALYREFQ86V81 257 aaKnown RBP12.55□□□□□ -0.4
SMARCA4-218ENST00000592158 GUCD1Q96NT3 240 aa12.55□□□□□ -0.4
SMARCA4-218ENST00000592158 EFCC1Q9HA90 598 aa12.55□□□□□ -0.4
SMARCA4-218ENST00000592158 CDHR2Q9BYE9 1310 aa12.55□□□□□ -0.4
SMARCA4-218ENST00000592158 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 SHTN1A0MZ66 631 aa12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 SLC9C1Q4G0N8 1177 aa12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 CD99L2Q8TCZ2 262 aa12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 ERO1AQ96HE7 468 aa12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 CNOT7Q9UIV1 285 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
SMARCA4-218ENST00000592158 BCAMP50895 628 aa12.53□□□□□ -0.4
SMARCA4-218ENST00000592158 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
SMARCA4-218ENST00000592158 SETDB2Q96T68 719 aa12.53□□□□□ -0.4
SMARCA4-218ENST00000592158 ZNF609O15014 1411 aa12.53□□□□□ -0.4
SMARCA4-218ENST00000592158 H7C1D1 291 aa12.52□□□□□ -0.41
SMARCA4-218ENST00000592158 HSP90AB1P08238 724 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-218ENST00000592158 ALDH1B1P30837 517 aa12.52□□□□□ -0.41
SMARCA4-218ENST00000592158 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-218ENST00000592158 DCPSQ96C86 337 aaKnown RBP12.52□□□□□ -0.41
SMARCA4-218ENST00000592158 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-218ENST00000592158 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
SMARCA4-218ENST00000592158 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
SMARCA4-218ENST00000592158 TERF2IPQ9NYB0 399 aa12.51□□□□□ -0.41
SMARCA4-218ENST00000592158 WASHC2AQ641Q2 1341 aa12.51□□□□□ -0.41
SMARCA4-218ENST00000592158 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
SMARCA4-218ENST00000592158 FLT4P35916 1363 aa12.51□□□□□ -0.41
SMARCA4-218ENST00000592158 KLRG2A4D1S0 409 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 BMP8BP34820 402 aa12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 NFATC2IPQ8NCF5 419 aa12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 SCN7AQ01118 1682 aa12.5□□□□□ -0.41
SMARCA4-218ENST00000592158 A0A087WZG4 1122 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 ALDH1A1P00352 501 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 MAFAQ8NHW3 353 aaPredicted RBP12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 GDF15Q99988 308 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 ZNRF3Q9ULT6 936 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 PTCH2Q9Y6C5 1203 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 NCOR1O75376 2440 aa12.49□□□□□ -0.41
SMARCA4-218ENST00000592158 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
SMARCA4-218ENST00000592158 EVI5O60447 810 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms