RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 UTP14AQ9BVJ6 771 aaKnown RBP12.4□□□□□ -0.42
TPM4-215ENST00000592138 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
TPM4-215ENST00000592138 ANKRD36CQ5JPF3 1778 aa12.4□□□□□ -0.42
TPM4-215ENST00000592138 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
TPM4-215ENST00000592138 PDE6BP35913 854 aa12.39□□□□□ -0.43
TPM4-215ENST00000592138 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
TPM4-215ENST00000592138 PPP4R3CPQ6ZMV5 832 aa12.39□□□□□ -0.43
TPM4-215ENST00000592138 DNAAF4Q8WXU2 420 aa12.39□□□□□ -0.43
TPM4-215ENST00000592138 AFDNP55196 1824 aaKnown RBP12.39□□□□□ -0.43
TPM4-215ENST00000592138 KIF16BQ96L93 1317 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 NPHP1O15259 732 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 KLHL34Q8N239 644 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 NLGN2Q8NFZ4 835 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 MYD88Q99836 296 aa12.38□□□□□ -0.43
TPM4-215ENST00000592138 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
TPM4-215ENST00000592138 KIAA1551Q9HCM1 1747 aa12.37□□□□□ -0.43
TPM4-215ENST00000592138 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
TPM4-215ENST00000592138 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
TPM4-215ENST00000592138 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
TPM4-215ENST00000592138 ZBTB38Q8NAP3 1195 aaPredicted RBP12.37□□□□□ -0.43
TPM4-215ENST00000592138 CWC25Q9NXE8 425 aaPredicted RBP12.37□□□□□ -0.43
TPM4-215ENST00000592138 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
TPM4-215ENST00000592138 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
TPM4-215ENST00000592138 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
TPM4-215ENST00000592138 H0YIN7 160 aa12.36□□□□□ -0.43
TPM4-215ENST00000592138 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
TPM4-215ENST00000592138 KCNA3P22001 575 aa12.36□□□□□ -0.43
TPM4-215ENST00000592138 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
TPM4-215ENST00000592138 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
TPM4-215ENST00000592138 BEND3Q5T5X7 828 aa12.36□□□□□ -0.43
TPM4-215ENST00000592138 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
TPM4-215ENST00000592138 PCNTO95613 3336 aa12.35□□□□□ -0.43
TPM4-215ENST00000592138 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
TPM4-215ENST00000592138 PCCAP05165 728 aaPredicted RBP12.35□□□□□ -0.43
TPM4-215ENST00000592138 DPEP1P16444 411 aa12.35□□□□□ -0.43
TPM4-215ENST00000592138 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
TPM4-215ENST00000592138 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
TPM4-215ENST00000592138 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
TPM4-215ENST00000592138 A0A0G2JLW4 131 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 F6X3S4 739 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
TPM4-215ENST00000592138 ALDH1L1O75891 902 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 SRGNP10124 158 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
TPM4-215ENST00000592138 GCKRQ14397 625 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 C2CD5Q86YS7 1000 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 NOB1Q9ULX3 412 aaKnown RBP12.34□□□□□ -0.43
TPM4-215ENST00000592138 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
TPM4-215ENST00000592138 DLEC1Q9Y238 1755 aa12.33□□□□□ -0.44
TPM4-215ENST00000592138 NPR1P16066 1061 aa12.33□□□□□ -0.44
TPM4-215ENST00000592138 CWF19L2Q2TBE0 894 aaKnown RBP12.33□□□□□ -0.44
TPM4-215ENST00000592138 CCDC24Q8N4L8 307 aa12.33□□□□□ -0.44
TPM4-215ENST00000592138 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
TPM4-215ENST00000592138 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
TPM4-215ENST00000592138 H7C1W4 665 aa12.32□□□□□ -0.44
TPM4-215ENST00000592138 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
TPM4-215ENST00000592138 BCAR3O75815 825 aa12.32□□□□□ -0.44
TPM4-215ENST00000592138 CHRNA5P30532 468 aa12.32□□□□□ -0.44
TPM4-215ENST00000592138 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
TPM4-215ENST00000592138 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
TPM4-215ENST00000592138 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
TPM4-215ENST00000592138 YTHDC1Q96MU7 727 aaKnown RBP12.32□□□□□ -0.44
TPM4-215ENST00000592138 ABCC4O15439 1325 aa12.32□□□□□ -0.44
TPM4-215ENST00000592138 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
TPM4-215ENST00000592138 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
TPM4-215ENST00000592138 LAMB2P55268 1798 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 CASP7P55210 303 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 SF3B3Q15393 1217 aaKnown RBP12.31□□□□□ -0.44
TPM4-215ENST00000592138 DALRD3Q5D0E6 543 aaKnown RBP12.31□□□□□ -0.44
TPM4-215ENST00000592138 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 ATF7IPQ6VMQ6 1270 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 PLA2G12BQ9BX93 195 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 BRCA1P38398 1863 aaKnown RBP12.31□□□□□ -0.44
TPM4-215ENST00000592138 UTYO14607 1347 aa12.31□□□□□ -0.44
TPM4-215ENST00000592138 GRM8O00222 908 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 GRIN3BO60391 1043 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 PDE8AO60658 829 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
TPM4-215ENST00000592138 TRIM27P14373 513 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 ZKSCAN2Q63HK3 967 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 SYNE4Q8N205 404 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
TPM4-215ENST00000592138 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
TPM4-215ENST00000592138 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
TPM4-215ENST00000592138 DDX60Q8IY21 1712 aaKnown RBP12.29□□□□□ -0.44
TPM4-215ENST00000592138 GPR162Q16538 588 aa12.29□□□□□ -0.44
TPM4-215ENST00000592138 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
TPM4-215ENST00000592138 C3orf67Q6ZVT6 689 aa12.29□□□□□ -0.44
TPM4-215ENST00000592138 ZNF622Q969S3 477 aaKnown RBP eCLIP12.29□□□□□ -0.444e-7■■□□□ 11.9
TPM4-215ENST00000592138 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms