RNA–Protein interactions for RNA: ENST00000591964.5

PQLC1-213, Transcript of PQ loop repeat containing 1, human

TSL 3

Gene PQLC1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PQLC1-213	ENST00000591964	CHPF2	Q9P2E5	772 aa		33.06	■■■□□ 2.88
PQLC1-213	ENST00000591964	HSP90AB3P	Q58FF7	597 aa		33.05	■■■□□ 2.88
PQLC1-213	ENST00000591964	DPY19L2	Q6NUT2	758 aa		33.05	■■■□□ 2.88
PQLC1-213	ENST00000591964	RPGR	Q92834	1020 aa	Known RBP	33.05	■■■□□ 2.88
PQLC1-213	ENST00000591964	ZNF853	P0CG23	659 aa		33.04	■■■□□ 2.88
PQLC1-213	ENST00000591964	DUSP27	Q5VZP5	1158 aa		33.04	■■■□□ 2.88
PQLC1-213	ENST00000591964	IFT57	Q9NWB7	429 aa		33.04	■■■□□ 2.88
PQLC1-213	ENST00000591964	UTP14A	Q9BVJ6	771 aa	Known RBP	33.03	■■■□□ 2.88
PQLC1-213	ENST00000591964	GNAI1	P63096	354 aa		33.02	■■■□□ 2.88
PQLC1-213	ENST00000591964	OLFM4	Q6UX06	510 aa		33.02	■■■□□ 2.88
PQLC1-213	ENST00000591964	RTKN2	Q8IZC4	609 aa		33.02	■■■□□ 2.88
PQLC1-213	ENST00000591964	DBF4	Q9UBU7	674 aa	Predicted RBP	33.02	■■■□□ 2.88
PQLC1-213	ENST00000591964	VEGFA	P15692	232 aa	Predicted RBP	33.01	■■■□□ 2.87
PQLC1-213	ENST00000591964	HOXA10	P31260	410 aa	Predicted RBP	33.01	■■■□□ 2.87
PQLC1-213	ENST00000591964	FKBP4	Q02790	459 aa	Known RBP eCLIP	33	■■■□□ 2.87
PQLC1-213	ENST00000591964	TCIRG1	Q13488	830 aa		32.99	■■■□□ 2.87
PQLC1-213	ENST00000591964	RBM17	Q96I25	401 aa	Known RBP	32.99	■■■□□ 2.87
PQLC1-213	ENST00000591964	FSTL1	Q12841	308 aa		32.98	■■■□□ 2.87
PQLC1-213	ENST00000591964	NLRP10	Q86W26	655 aa		32.98	■■■□□ 2.87
PQLC1-213	ENST00000591964	WDR90	Q96KV7	1748 aa		32.98	■■■□□ 2.87
PQLC1-213	ENST00000591964	NLRP3	Q96P20	1036 aa		32.98	■■■□□ 2.87
PQLC1-213	ENST00000591964	RNF123	Q5XPI4	1314 aa		32.98	■■■□□ 2.87
PQLC1-213	ENST00000591964	ANP32C	O43423	234 aa		32.97	■■■□□ 2.87
PQLC1-213	ENST00000591964	APLP1	P51693	650 aa		32.97	■■■□□ 2.87
PQLC1-213	ENST00000591964	SLC10A5	Q5PT55	438 aa		32.97	■■■□□ 2.87
PQLC1-213	ENST00000591964	HYPK	Q9NX55	129 aa		32.97	■■■□□ 2.87
PQLC1-213	ENST00000591964	C3orf67	Q6ZVT6	689 aa		32.96	■■■□□ 2.87
PQLC1-213	ENST00000591964	PLBD2	Q8NHP8	589 aa		32.96	■■■□□ 2.87
PQLC1-213	ENST00000591964	CRAMP1	Q96RY5	1269 aa		32.96	■■■□□ 2.87
PQLC1-213	ENST00000591964	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.96	■■■□□ 2.87
PQLC1-213	ENST00000591964	ANKRD13D	Q6ZTN6	518 aa		32.95	■■■□□ 2.87
PQLC1-213	ENST00000591964	CC2D2B	Q6DHV5	1058 aa		32.94	■■■□□ 2.86
PQLC1-213	ENST00000591964	SYNE4	Q8N205	404 aa		32.93	■■■□□ 2.86
PQLC1-213	ENST00000591964	SMC1B	Q8NDV3	1235 aa		32.93	■■■□□ 2.86
PQLC1-213	ENST00000591964	MRS2	Q9HD23	443 aa		32.93	■■■□□ 2.86
PQLC1-213	ENST00000591964	TRMT112	Q9UI30	125 aa	Known RBP	32.93	■■■□□ 2.86
PQLC1-213	ENST00000591964	LAMB2	P55268	1798 aa		32.92	■■■□□ 2.86
PQLC1-213	ENST00000591964	ELL2	O00472	640 aa	Predicted RBP	32.92	■■■□□ 2.86
PQLC1-213	ENST00000591964	POTEC	B2RU33	542 aa		32.91	■■■□□ 2.86
PQLC1-213	ENST00000591964	PPEF1	O14829	653 aa	Predicted RBP	32.91	■■■□□ 2.86
PQLC1-213	ENST00000591964	PSMD1	Q99460	953 aa		32.91	■■■□□ 2.86
PQLC1-213	ENST00000591964	DDN	O94850	711 aa	Predicted RBP	32.9	■■■□□ 2.86
PQLC1-213	ENST00000591964	SH3TC1	Q8TE82	1336 aa		32.9	■■■□□ 2.86
PQLC1-213	ENST00000591964	SNED1	Q8TER0	1413 aa		32.9	■■■□□ 2.86
PQLC1-213	ENST00000591964	HCLS1	P14317	486 aa	Predicted RBP	32.89	■■■□□ 2.86
PQLC1-213	ENST00000591964	IARS	P41252	1262 aa	Known RBP	32.89	■■■□□ 2.86
PQLC1-213	ENST00000591964	GRIPAP1	Q4V328	841 aa		32.89	■■■□□ 2.86
PQLC1-213	ENST00000591964	C8orf58	Q8NAV2	365 aa		32.89	■■■□□ 2.86
PQLC1-213	ENST00000591964	CCDC27	Q2M243	656 aa		32.88	■■■□□ 2.85
PQLC1-213	ENST00000591964	TCERG1	O14776	1098 aa	Known RBP	32.87	■■■□□ 2.85
PQLC1-213	ENST00000591964	ISCA1	Q9BUE6	129 aa		32.87	■■■□□ 2.85
PQLC1-213	ENST00000591964	ZNF428	Q96B54	188 aa		32.86	■■■□□ 2.85
PQLC1-213	ENST00000591964	ABCC4	O15439	1325 aa		32.85	■■■□□ 2.85
PQLC1-213	ENST00000591964	ATP5J2-PTCD1	G3V325	749 aa		32.85	■■■□□ 2.85
PQLC1-213	ENST00000591964	WWC1	Q8IX03	1113 aa		32.85	■■■□□ 2.85
PQLC1-213	ENST00000591964	CHMP4A	Q9BY43	222 aa		32.85	■■■□□ 2.85
PQLC1-213	ENST00000591964	TMX4	Q9H1E5	349 aa	Predicted RBP	32.85	■■■□□ 2.85
PQLC1-213	ENST00000591964	GOLGA2	Q08379	1002 aa		32.84	■■■□□ 2.85
PQLC1-213	ENST00000591964	RIC3	Q7Z5B4	369 aa		32.83	■■■□□ 2.85
PQLC1-213	ENST00000591964	PHAX	Q9H814	394 aa	Known RBP	32.83	■■■□□ 2.85
PQLC1-213	ENST00000591964	ATP6V0A2	Q9Y487	856 aa		32.83	■■■□□ 2.85
PQLC1-213	ENST00000591964	SCN4A	P35499	1836 aa		32.83	■■■□□ 2.85
PQLC1-213	ENST00000591964	DDX60	Q8IY21	1712 aa	Known RBP	32.82	■■■□□ 2.85
PQLC1-213	ENST00000591964	ZNF541	Q9H0D2	1346 aa		32.82	■■■□□ 2.84
PQLC1-213	ENST00000591964	CCDC30	Q5VVM6	783 aa		32.82	■■■□□ 2.84
PQLC1-213	ENST00000591964	SLC51A	Q86UW1	340 aa		32.82	■■■□□ 2.84
PQLC1-213	ENST00000591964	JDP2	Q8WYK2	163 aa		32.82	■■■□□ 2.84
PQLC1-213	ENST00000591964	TSR2	Q969E8	191 aa	Known RBP	32.82	■■■□□ 2.84
PQLC1-213	ENST00000591964	IQCA1L	A6NCM1	817 aa		32.81	■■■□□ 2.84
PQLC1-213	ENST00000591964	FZD9	O00144	591 aa		32.81	■■■□□ 2.84
PQLC1-213	ENST00000591964	BBOX1	O75936	387 aa		32.81	■■■□□ 2.84
PQLC1-213	ENST00000591964	DDX46	Q7L014	1031 aa	Known RBP	32.81	■■■□□ 2.84
PQLC1-213	ENST00000591964	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.81	■■■□□ 2.84
PQLC1-213	ENST00000591964	TRIM28	Q13263	835 aa	Known RBP	32.8	■■■□□ 2.84
PQLC1-213	ENST00000591964	NCBP3	Q53F19	620 aa	Known RBP	32.8	■■■□□ 2.84
PQLC1-213	ENST00000591964	TSPYL6	Q8N831	410 aa		32.8	■■■□□ 2.84
PQLC1-213	ENST00000591964	FAM89A	Q96GI7	184 aa		32.8	■■■□□ 2.84
PQLC1-213	ENST00000591964	TAF1	P21675	1872 aa		32.79	■■■□□ 2.84
PQLC1-213	ENST00000591964	DNAJC5G	Q8N7S2	189 aa		32.78	■■■□□ 2.84
PQLC1-213	ENST00000591964	LARGE2	Q8N3Y3	721 aa		32.77	■■■□□ 2.84
PQLC1-213	ENST00000591964	IL16	Q14005	1332 aa		32.77	■■■□□ 2.84
PQLC1-213	ENST00000591964	HTRA3	P83110	453 aa		32.76	■■■□□ 2.83
PQLC1-213	ENST00000591964	GRAP	Q13588	217 aa		32.76	■■■□□ 2.83
PQLC1-213	ENST00000591964	SP8	Q8IXZ3	490 aa		32.76	■■■□□ 2.83
PQLC1-213	ENST00000591964	GRAPL	Q8TC17	118 aa	Predicted RBP	32.76	■■■□□ 2.83
PQLC1-213	ENST00000591964	DDX58	O95786	925 aa	Known RBP	32.75	■■■□□ 2.83
PQLC1-213	ENST00000591964	RTL5	Q5HYW3	569 aa	Predicted RBP	32.75	■■■□□ 2.83
PQLC1-213	ENST00000591964	COL4A5	P29400	1685 aa		32.75	■■■□□ 2.83
PQLC1-213	ENST00000591964	EIF6	P56537	245 aa	Known RBP	32.74	■■■□□ 2.83
PQLC1-213	ENST00000591964	GPC2	Q8N158	579 aa		32.74	■■■□□ 2.83
PQLC1-213	ENST00000591964	MYD88	Q99836	296 aa		32.74	■■■□□ 2.83
PQLC1-213	ENST00000591964	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.74	■■■□□ 2.83
PQLC1-213	ENST00000591964	CHADL	Q6NUI6	762 aa		32.73	■■■□□ 2.83
PQLC1-213	ENST00000591964	IRS4	O14654	1257 aa	Predicted RBP	32.72	■■■□□ 2.83
PQLC1-213	ENST00000591964	SF3B3	Q15393	1217 aa	Known RBP	32.72	■■■□□ 2.83
PQLC1-213	ENST00000591964	SUPT20H	Q8NEM7	779 aa		32.72	■■■□□ 2.83
PQLC1-213	ENST00000591964	STK31	Q9BXU1	1019 aa		32.72	■■■□□ 2.83
PQLC1-213	ENST00000591964	VPS33B	Q9H267	617 aa		32.72	■■■□□ 2.83
PQLC1-213	ENST00000591964	HACL1	Q9UJ83	578 aa		32.72	■■■□□ 2.83
PQLC1-213	ENST00000591964	SALL2	Q9Y467	1007 aa	Predicted RBP	32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms