RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 VAMP4O75379 141 aa17.56■□□□□ 0.4
RDH13-219ENST00000591960 ZNF784Q8NCA9 323 aaPredicted RBP17.56■□□□□ 0.4
RDH13-219ENST00000591960 ISCA1Q9BUE6 129 aa17.56■□□□□ 0.4
RDH13-219ENST00000591960 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
RDH13-219ENST00000591960 CHMP4AQ9BY43 222 aa17.56■□□□□ 0.4
RDH13-219ENST00000591960 SBF1O95248 1867 aa17.56■□□□□ 0.4
RDH13-219ENST00000591960 CRY2Q49AN0 593 aa17.55■□□□□ 0.4
RDH13-219ENST00000591960 C3orf67Q6ZVT6 689 aa17.55■□□□□ 0.4
RDH13-219ENST00000591960 G2E3Q7L622 706 aa17.55■□□□□ 0.4
RDH13-219ENST00000591960 SYNE4Q8N205 404 aa17.55■□□□□ 0.4
RDH13-219ENST00000591960 ZNF428Q96B54 188 aa17.55■□□□□ 0.4
RDH13-219ENST00000591960 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
RDH13-219ENST00000591960 LAMB2P55268 1798 aa17.55■□□□□ 0.4
RDH13-219ENST00000591960 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
RDH13-219ENST00000591960 NPR1P16066 1061 aa17.54■□□□□ 0.4
RDH13-219ENST00000591960 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
RDH13-219ENST00000591960 CNKSR1Q969H4 720 aa17.54■□□□□ 0.4
RDH13-219ENST00000591960 STK31Q9BXU1 1019 aa17.54■□□□□ 0.4
RDH13-219ENST00000591960 CACNA1FO60840 1977 aa17.54■□□□□ 0.4
RDH13-219ENST00000591960 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
RDH13-219ENST00000591960 C21orf2O43822 256 aa17.53■□□□□ 0.4
RDH13-219ENST00000591960 SLC10A5Q5PT55 438 aa17.53■□□□□ 0.4
RDH13-219ENST00000591960 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
RDH13-219ENST00000591960 DDX60Q8IY21 1712 aaKnown RBP17.53■□□□□ 0.4
RDH13-219ENST00000591960 RNF123Q5XPI4 1314 aa17.53■□□□□ 0.4
RDH13-219ENST00000591960 SLC4A2P04920 1241 aa17.52■□□□□ 0.4
RDH13-219ENST00000591960 PRELPP51888 382 aa17.52■□□□□ 0.4
RDH13-219ENST00000591960 RASSF7Q02833 373 aa17.52■□□□□ 0.4
RDH13-219ENST00000591960 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.4
RDH13-219ENST00000591960 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
RDH13-219ENST00000591960 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
RDH13-219ENST00000591960 NFKBIEO00221 500 aa17.51■□□□□ 0.39
RDH13-219ENST00000591960 C7orf43Q8WVR3 580 aa17.51■□□□□ 0.39
RDH13-219ENST00000591960 MYD88Q99836 296 aa17.51■□□□□ 0.39
RDH13-219ENST00000591960 CCDC88AQ3V6T2 1871 aa17.51■□□□□ 0.39
RDH13-219ENST00000591960 DDX58O95786 925 aaKnown RBP17.5■□□□□ 0.39
RDH13-219ENST00000591960 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
RDH13-219ENST00000591960 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
RDH13-219ENST00000591960 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
RDH13-219ENST00000591960 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
RDH13-219ENST00000591960 MAP3K2Q9Y2U5 619 aa17.5■□□□□ 0.39
RDH13-219ENST00000591960 SH3TC1Q8TE82 1336 aa17.5■□□□□ 0.39
RDH13-219ENST00000591960 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
RDH13-219ENST00000591960 E9PSI1 815 aa17.49■□□□□ 0.39
RDH13-219ENST00000591960 HOXA10P31260 410 aaPredicted RBP17.49■□□□□ 0.39
RDH13-219ENST00000591960 C9orf131Q5VYM1 1079 aa17.49■□□□□ 0.39
RDH13-219ENST00000591960 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
RDH13-219ENST00000591960 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
RDH13-219ENST00000591960 FLIIQ13045 1269 aa17.48■□□□□ 0.39
RDH13-219ENST00000591960 OLFM4Q6UX06 510 aa17.48■□□□□ 0.39
RDH13-219ENST00000591960 FAM89AQ96GI7 184 aa17.48■□□□□ 0.39
RDH13-219ENST00000591960 NLRP3Q96P20 1036 aa17.48■□□□□ 0.39
RDH13-219ENST00000591960 IGKV5-2P06315 115 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 SLC51AQ86UW1 340 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
RDH13-219ENST00000591960 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 TAF1P21675 1872 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 RTL5Q5HYW3 569 aaPredicted RBP17.47■□□□□ 0.39
RDH13-219ENST00000591960 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
RDH13-219ENST00000591960 CCDC191Q8NCU4 936 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 CRAMP1Q96RY5 1269 aa17.47■□□□□ 0.39
RDH13-219ENST00000591960 TIAM2Q8IVF5 1701 aa17.46■□□□□ 0.39
RDH13-219ENST00000591960 LMNB1P20700 586 aa17.46■□□□□ 0.38
RDH13-219ENST00000591960 ZBTB38Q8NAP3 1195 aaPredicted RBP17.46■□□□□ 0.38
RDH13-219ENST00000591960 RBM17Q96I25 401 aaKnown RBP17.46■□□□□ 0.38
RDH13-219ENST00000591960 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
RDH13-219ENST00000591960 COL4A1P02462 1669 aa17.45■□□□□ 0.38
RDH13-219ENST00000591960 FKBP5Q13451 457 aaPredicted RBP17.45■□□□□ 0.38
RDH13-219ENST00000591960 CCDC93Q567U6 631 aa17.45■□□□□ 0.38
RDH13-219ENST00000591960 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
RDH13-219ENST00000591960 ZNF526Q8TF50 670 aaPredicted RBP17.45■□□□□ 0.38
RDH13-219ENST00000591960 CWC25Q9NXE8 425 aaPredicted RBP17.45■□□□□ 0.38
RDH13-219ENST00000591960 ABCC4O15439 1325 aa17.44■□□□□ 0.38
RDH13-219ENST00000591960 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
RDH13-219ENST00000591960 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
RDH13-219ENST00000591960 PCCAP05165 728 aaPredicted RBP17.44■□□□□ 0.38
RDH13-219ENST00000591960 CWF19L2Q2TBE0 894 aaKnown RBP17.44■□□□□ 0.38
RDH13-219ENST00000591960 JARID2Q92833 1246 aaPredicted RBP17.44■□□□□ 0.38
RDH13-219ENST00000591960 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
RDH13-219ENST00000591960 NEURL1BA8MQ27 555 aa17.43■□□□□ 0.38
RDH13-219ENST00000591960 DNAAF4Q8WXU2 420 aa17.43■□□□□ 0.38
RDH13-219ENST00000591960 PPEF1O14829 653 aaPredicted RBP17.42■□□□□ 0.38
RDH13-219ENST00000591960 NEXNQ0ZGT2 675 aa17.42■□□□□ 0.38
RDH13-219ENST00000591960 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
RDH13-219ENST00000591960 F6X3S4 739 aa17.41■□□□□ 0.38
RDH13-219ENST00000591960 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
RDH13-219ENST00000591960 GPBP1L1Q9HC44 474 aaPredicted RBP17.41■□□□□ 0.38
RDH13-219ENST00000591960 CDHR2Q9BYE9 1310 aa17.4■□□□□ 0.38
RDH13-219ENST00000591960 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
RDH13-219ENST00000591960 RTKN2Q8IZC4 609 aa17.4■□□□□ 0.38
RDH13-219ENST00000591960 MRPL50Q8N5N7 158 aaKnown RBP17.4■□□□□ 0.38
RDH13-219ENST00000591960 LRRC37AA6NMS7 1700 aa17.39■□□□□ 0.37
RDH13-219ENST00000591960 ZC3H4Q9UPT8 1303 aaKnown RBP17.39■□□□□ 0.37
RDH13-219ENST00000591960 GRAPQ13588 217 aa17.39■□□□□ 0.37
RDH13-219ENST00000591960 GCKRQ14397 625 aa17.39■□□□□ 0.37
RDH13-219ENST00000591960 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
RDH13-219ENST00000591960 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
RDH13-219ENST00000591960 SSH1Q8WYL5 1049 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms