RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 HSP90AB1P08238 724 aaKnown RBP11.31□□□□□ -0.6
DNMT1-224ENST00000591764 TGFB2P61812 414 aa11.31□□□□□ -0.6
DNMT1-224ENST00000591764 NLGN1Q8N2Q7 840 aa11.31□□□□□ -0.6
DNMT1-224ENST00000591764 ZNF516Q92618 1163 aa11.31□□□□□ -0.6
DNMT1-224ENST00000591764 PHKG2P15735 406 aa11.3□□□□□ -0.6
DNMT1-224ENST00000591764 PTGDRQ13258 359 aa11.3□□□□□ -0.6
DNMT1-224ENST00000591764 TRAPPC3LQ5T215 181 aa11.3□□□□□ -0.6
DNMT1-224ENST00000591764 AMIGO3Q86WK7 504 aa11.3□□□□□ -0.6
DNMT1-224ENST00000591764 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
DNMT1-224ENST00000591764 ASAP1Q9ULH1 1129 aa11.3□□□□□ -0.6
DNMT1-224ENST00000591764 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
DNMT1-224ENST00000591764 BCS1LQ9Y276 419 aa11.29□□□□□ -0.6
DNMT1-224ENST00000591764 PXDNLA1KZ92 1463 aa11.29□□□□□ -0.6
DNMT1-224ENST00000591764 ZNF831Q5JPB2 1677 aa11.29□□□□□ -0.6
DNMT1-224ENST00000591764 ERVV-2B6SEH9 535 aa11.28□□□□□ -0.6
DNMT1-224ENST00000591764 TOMM70O94826 608 aa11.28□□□□□ -0.6
DNMT1-224ENST00000591764 RFC4P35249 363 aa11.28□□□□□ -0.6
DNMT1-224ENST00000591764 C16orf71Q8IYS4 520 aaPredicted RBP11.28□□□□□ -0.6
DNMT1-224ENST00000591764 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
DNMT1-224ENST00000591764 PARP3Q9Y6F1 533 aa11.28□□□□□ -0.6
DNMT1-224ENST00000591764 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
DNMT1-224ENST00000591764 SEMA3EO15041 775 aa11.27□□□□□ -0.61
DNMT1-224ENST00000591764 ITPK1Q13572 414 aa11.27□□□□□ -0.61
DNMT1-224ENST00000591764 RC3H1Q5TC82 1133 aaKnown RBP11.27□□□□□ -0.61
DNMT1-224ENST00000591764 DCAF5Q96JK2 942 aa11.27□□□□□ -0.61
DNMT1-224ENST00000591764 CARD14Q9BXL6 1004 aa11.27□□□□□ -0.61
DNMT1-224ENST00000591764 ATG3Q9NT62 314 aa11.27□□□□□ -0.61
DNMT1-224ENST00000591764 CNTNAP4Q9C0A0 1308 aa11.27□□□□□ -0.61
DNMT1-224ENST00000591764 KDRP35968 1356 aa11.27□□□□□ -0.61
DNMT1-224ENST00000591764 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
DNMT1-224ENST00000591764 FCHSD2O94868 740 aa11.26□□□□□ -0.61
DNMT1-224ENST00000591764 AMOTQ4VCS5 1084 aa11.26□□□□□ -0.61
DNMT1-224ENST00000591764 ARHGAP27Q6ZUM4 889 aa11.26□□□□□ -0.61
DNMT1-224ENST00000591764 SMIM5Q71RC9 77 aa11.26□□□□□ -0.61
DNMT1-224ENST00000591764 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
DNMT1-224ENST00000591764 CABP4P57796 275 aa11.25□□□□□ -0.61
DNMT1-224ENST00000591764 FAM161AQ3B820 660 aa11.25□□□□□ -0.61
DNMT1-224ENST00000591764 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
DNMT1-224ENST00000591764 C1orf141Q5JVX7 400 aa11.25□□□□□ -0.61
DNMT1-224ENST00000591764 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
DNMT1-224ENST00000591764 POLKQ9UBT6 870 aa11.25□□□□□ -0.61
DNMT1-224ENST00000591764 KDM2BQ8NHM5 1336 aa11.25□□□□□ -0.61
DNMT1-224ENST00000591764 COL5A3P25940 1745 aaPredicted RBP11.24□□□□□ -0.61
DNMT1-224ENST00000591764 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
DNMT1-224ENST00000591764 RPS6KA4O75676 772 aa11.24□□□□□ -0.61
DNMT1-224ENST00000591764 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
DNMT1-224ENST00000591764 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
DNMT1-224ENST00000591764 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
DNMT1-224ENST00000591764 KIAA1551Q9HCM1 1747 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 BRCA1P38398 1863 aaKnown RBP11.23□□□□□ -0.61
DNMT1-224ENST00000591764 GYS1P13807 737 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 DPEP1P16444 411 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-224ENST00000591764 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
DNMT1-224ENST00000591764 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 TIMELESSQ9UNS1 1208 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 ADGRG1Q9Y653 693 aa11.23□□□□□ -0.61
DNMT1-224ENST00000591764 MTHFSP49914 203 aa11.22□□□□□ -0.61
DNMT1-224ENST00000591764 COPS2P61201 443 aa11.22□□□□□ -0.61
DNMT1-224ENST00000591764 FSTL1Q12841 308 aa11.22□□□□□ -0.61
DNMT1-224ENST00000591764 DALRD3Q5D0E6 543 aaKnown RBP11.22□□□□□ -0.61
DNMT1-224ENST00000591764 PPP1R18Q6NYC8 613 aa11.22□□□□□ -0.61
DNMT1-224ENST00000591764 C9orf131Q5VYM1 1079 aa11.21□□□□□ -0.61
DNMT1-224ENST00000591764 WDR90Q96KV7 1748 aa11.21□□□□□ -0.62
DNMT1-224ENST00000591764 ZC3H4Q9UPT8 1303 aaKnown RBP11.2□□□□□ -0.62
DNMT1-224ENST00000591764 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
DNMT1-224ENST00000591764 ZPR1O75312 459 aa11.2□□□□□ -0.62
DNMT1-224ENST00000591764 CRKLP46109 303 aaKnown RBP11.2□□□□□ -0.62
DNMT1-224ENST00000591764 NMRK2Q9NPI5 230 aa11.2□□□□□ -0.62
DNMT1-224ENST00000591764 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
DNMT1-224ENST00000591764 TNRC6CQ9HCJ0 1690 aaKnown RBP11.2□□□□□ -0.62
DNMT1-224ENST00000591764 KDM6AO15550 1401 aaPredicted RBP11.19□□□□□ -0.62
DNMT1-224ENST00000591764 USP42Q9H9J4 1324 aaKnown RBP11.19□□□□□ -0.62
DNMT1-224ENST00000591764 DNAJB2P25686 324 aa11.19□□□□□ -0.62
DNMT1-224ENST00000591764 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
DNMT1-224ENST00000591764 SMC1BQ8NDV3 1235 aa11.18□□□□□ -0.62
DNMT1-224ENST00000591764 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
DNMT1-224ENST00000591764 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
DNMT1-224ENST00000591764 PRKD2Q9BZL6 878 aa11.18□□□□□ -0.62
DNMT1-224ENST00000591764 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
DNMT1-224ENST00000591764 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
DNMT1-224ENST00000591764 MORC1Q86VD1 984 aa11.17□□□□□ -0.62
DNMT1-224ENST00000591764 DNAJC5GQ8N7S2 189 aa11.17□□□□□ -0.62
DNMT1-224ENST00000591764 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
DNMT1-224ENST00000591764 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.17□□□□□ -0.62
DNMT1-224ENST00000591764 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
DNMT1-224ENST00000591764 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
DNMT1-224ENST00000591764 KCNA3P22001 575 aa11.16□□□□□ -0.62
DNMT1-224ENST00000591764 NFATC2IPQ8NCF5 419 aa11.16□□□□□ -0.62
DNMT1-224ENST00000591764 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
DNMT1-224ENST00000591764 TJP1Q07157 1748 aa11.15□□□□□ -0.62
DNMT1-224ENST00000591764 EIF4G2P78344 907 aaKnown RBP eCLIP11.15□□□□□ -0.62
DNMT1-224ENST00000591764 TRIM26Q12899 539 aaPredicted RBP11.15□□□□□ -0.62
DNMT1-224ENST00000591764 AKAP4Q5JQC9 854 aa11.15□□□□□ -0.62
DNMT1-224ENST00000591764 SULT6B1Q6IMI4 303 aa11.15□□□□□ -0.62
DNMT1-224ENST00000591764 PANK3Q9H999 370 aa11.15□□□□□ -0.62
DNMT1-224ENST00000591764 SRP68Q9UHB9 627 aaKnown RBP11.15□□□□□ -0.62
DNMT1-224ENST00000591764 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms