RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	EDEM1	Q92611	657 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	L3MBTL2	Q969R5	705 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	NIFK	Q9BYG3	293 aa	Known RBP	7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	NIF3L1	Q9GZT8	377 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	STK17A	Q9UEE5	414 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	DYRK1B	Q9Y463	629 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	SHROOM4	Q9ULL8	1493 aa		7.8	□□□□□ -1.16
ATP9B-223	ENST00000590608	BRD2	P25440	801 aa	Known RBP	7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	XPC	Q01831	940 aa	Predicted RBP	7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	GAS6	Q14393	721 aa		7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	LDLRAD1	Q5T700	205 aa		7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	SV2A	Q7L0J3	742 aa		7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	DMRTB1	Q96MA1	342 aa		7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	CNTNAP3B	Q96NU0	1288 aa		7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	CNTNAP3	Q9BZ76	1288 aa		7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	PHACTR1	Q9C0D0	580 aa		7.79	□□□□□ -1.16
ATP9B-223	ENST00000590608	PNMA6F	A0A0J9YX94	578 aa		7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608	TXLNA	P40222	546 aa		7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608	ZAP70	P43403	619 aa		7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608	PHKA2	P46019	1235 aa		7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608	HDLBP	Q00341	1268 aa	Known RBP	7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608	DBN1	Q16643	649 aa		7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608	TRIM22	Q8IYM9	498 aa		7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608	CITED4	Q96RK1	184 aa		7.78	□□□□□ -1.16
ATP9B-223	ENST00000590608		A6NHS1	94 aa		7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	PRPF40A	O75400	957 aa	Known RBP	7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	PDGFA	P04085	211 aa		7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	ERCC5	P28715	1186 aa	Predicted RBP	7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	GTF2E1	P29083	439 aa	Predicted RBP	7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	PLA2G4A	P47712	749 aa		7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	RTN1	Q16799	776 aa		7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	C7orf43	Q8WVR3	580 aa		7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	IFT43	Q96FT9	208 aa		7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	GAS2L1	Q99501	681 aa	Predicted RBP	7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	TIMMDC1	Q9NPL8	285 aa		7.77	□□□□□ -1.17
ATP9B-223	ENST00000590608	GPR25	O00155	361 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	PDE3B	Q13370	1112 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	C11orf91	Q3C1V1	193 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	RIPOR1	Q6ZS17	1223 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	GJD3	Q8N144	294 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	GPR152	Q8TDT2	470 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	KLRG1	Q96E93	195 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	BCL11A	Q9H165	835 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	MRS2	Q9HD23	443 aa		7.76	□□□□□ -1.17
ATP9B-223	ENST00000590608	ATP4A	P20648	1035 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	MZF1	P28698	734 aa	Predicted RBP	7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	ZC3H6	P61129	1189 aa	Known RBP	7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	PSMD2	Q13200	908 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	ORC1	Q13415	861 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	NAALADL2	Q58DX5	795 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	TMEM87A	Q8NBN3	555 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	ALKBH8	Q96BT7	664 aa	Known RBP	7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	ZDHHC3	Q9NYG2	299 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	VTI1B	Q9UEU0	232 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608	BCS1L	Q9Y276	419 aa		7.75	□□□□□ -1.17
ATP9B-223	ENST00000590608		A0A1B0GTH6	734 aa		7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	SCAMP3	O14828	347 aa	Known RBP	7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	ATP2B2	Q01814	1243 aa		7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	ENOX2	Q16206	610 aa	Known RBP	7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	TMC4	Q7Z404	712 aa		7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	TREML1	Q86YW5	311 aa		7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	C8orf37	Q96NL8	207 aa		7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	GPAM	Q9HCL2	828 aa		7.74	□□□□□ -1.17
ATP9B-223	ENST00000590608	SORBS3	O60504	671 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	F11	P03951	625 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	SLURP2	P0DP57	97 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	MSX1	P28360	303 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	DAB2	P98082	770 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	UBAP2L	Q14157	1087 aa	Known RBP	7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	C8orf34	Q49A92	452 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	C1orf53	Q5VUE5	145 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	WHAMM	Q8TF30	809 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	GTPBP3	Q969Y2	492 aa	Known RBP	7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	NUDT16	Q96DE0	195 aa	Known RBP	7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	GMCL1	Q96IK5	515 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	CFHR5	Q9BXR6	569 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	GGNBP2	Q9H3C7	697 aa		7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.73	□□□□□ -1.17
ATP9B-223	ENST00000590608	NBPF1	Q3BBV0	1214 aa		7.72	□□□□□ -1.17
ATP9B-223	ENST00000590608	SREK1	Q8WXA9	508 aa	Known RBP	7.72	□□□□□ -1.17
ATP9B-223	ENST00000590608	NUCKS1	Q9H1E3	243 aa	Known RBP	7.72	□□□□□ -1.17
ATP9B-223	ENST00000590608	USP20	Q9Y2K6	914 aa		7.72	□□□□□ -1.17
ATP9B-223	ENST00000590608	RAD51AP2	Q09MP3	1159 aa		7.71	□□□□□ -1.18
ATP9B-223	ENST00000590608	ZNF385C	Q66K41	422 aa	Predicted RBP	7.71	□□□□□ -1.18
ATP9B-223	ENST00000590608	NT5DC4	Q86YG4	428 aa		7.71	□□□□□ -1.18
ATP9B-223	ENST00000590608	AIDA	Q96BJ3	306 aa		7.71	□□□□□ -1.18
ATP9B-223	ENST00000590608	HSH2D	Q96JZ2	352 aa		7.71	□□□□□ -1.18
ATP9B-223	ENST00000590608	RUBCNL	Q9H714	662 aa		7.71	□□□□□ -1.18
ATP9B-223	ENST00000590608		H7C1W4	665 aa		7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	METTL16	Q86W50	562 aa	Known RBP	7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	ZNF280C	Q8ND82	737 aa		7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	RHPN1	Q8TCX5	695 aa		7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	DRC1	Q96MC2	740 aa		7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	CSRNP1	Q96S65	589 aa		7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	ZIC5	Q96T25	663 aa		7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	CRISPLD1	Q9H336	500 aa		7.7	□□□□□ -1.18
ATP9B-223	ENST00000590608	EIF1AY	O14602	144 aa	Known RBP	7.69	□□□□□ -1.18
ATP9B-223	ENST00000590608	MICAL2	O94851	1124 aa		7.69	□□□□□ -1.18
ATP9B-223	ENST00000590608	ADAMTS2	O95450	1211 aa		7.69	□□□□□ -1.18
ATP9B-223	ENST00000590608	USP5	P45974	858 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms