RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 CNTNAP4Q9C0A0 1308 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 MTX1Q13505 466 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 GIGYF2Q6Y7W6 1299 aaKnown RBP22.48■■□□□ 1.19
CTDP1-205ENST00000590599 AKT1S1Q96B36 256 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 ERVV-1B6SEH8 477 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 PDE4AP27815 886 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 POLA2Q14181 598 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 BICC1Q9H694 974 aaKnown RBP22.48■■□□□ 1.19
CTDP1-205ENST00000590599 TBC1D2BQ9UPU7 963 aa22.48■■□□□ 1.19
CTDP1-205ENST00000590599 ATF5Q9Y2D1 282 aaPredicted RBP22.48■■□□□ 1.19
CTDP1-205ENST00000590599 NUP98P52948 1817 aa22.47■■□□□ 1.19
CTDP1-205ENST00000590599 SLC27A3Q5K4L6 730 aa22.47■■□□□ 1.19
CTDP1-205ENST00000590599 SMIM5Q71RC9 77 aa22.46■■□□□ 1.19
CTDP1-205ENST00000590599 KAZALD1Q96I82 304 aa22.46■■□□□ 1.19
CTDP1-205ENST00000590599 EXOC6BQ9Y2D4 811 aa22.46■■□□□ 1.19
CTDP1-205ENST00000590599 COL15A1P39059 1388 aa22.46■■□□□ 1.19
CTDP1-205ENST00000590599 APBB1O00213 710 aa22.45■■□□□ 1.19
CTDP1-205ENST00000590599 TRIM28Q13263 835 aaKnown RBP22.45■■□□□ 1.19
CTDP1-205ENST00000590599 HLFQ16534 295 aa22.45■■□□□ 1.19
CTDP1-205ENST00000590599 H7C1W4 665 aa22.45■■□□□ 1.18
CTDP1-205ENST00000590599 JARID2Q92833 1246 aaPredicted RBP22.45■■□□□ 1.18
CTDP1-205ENST00000590599 RC3H1Q5TC82 1133 aaKnown RBP22.44■■□□□ 1.18
CTDP1-205ENST00000590599 QSER1Q2KHR3 1735 aa22.44■■□□□ 1.18
CTDP1-205ENST00000590599 UTRNP46939 3433 aa22.43■■□□□ 1.18
CTDP1-205ENST00000590599 CASP7P55210 303 aa22.43■■□□□ 1.18
CTDP1-205ENST00000590599 GOLGB1Q14789 3259 aaKnown RBP22.43■■□□□ 1.18
CTDP1-205ENST00000590599 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
CTDP1-205ENST00000590599 SPON1Q9HCB6 807 aa22.43■■□□□ 1.18
CTDP1-205ENST00000590599 BCORQ6W2J9 1755 aa22.42■■□□□ 1.18
CTDP1-205ENST00000590599 PNPLA7Q6ZV29 1317 aa22.42■■□□□ 1.18
CTDP1-205ENST00000590599 SURF6O75683 361 aaKnown RBP22.42■■□□□ 1.18
CTDP1-205ENST00000590599 GPTP24298 496 aa22.42■■□□□ 1.18
CTDP1-205ENST00000590599 LRRCC1Q9C099 1032 aa22.41■■□□□ 1.18
CTDP1-205ENST00000590599 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
CTDP1-205ENST00000590599 C4BP0C0L5 1744 aa22.41■■□□□ 1.18
CTDP1-205ENST00000590599 SMARCA5O60264 1052 aaPredicted RBP22.4■■□□□ 1.18
CTDP1-205ENST00000590599 CAMTA2O94983 1202 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 PTGER2P43116 358 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 HSP90AB4PQ58FF6 505 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 RTL5Q5HYW3 569 aaPredicted RBP22.4■■□□□ 1.18
CTDP1-205ENST00000590599 EPHA10Q5JZY3 1008 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 NLRP10Q86W26 655 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 GNPATO15228 680 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 RAB11FIP3O75154 756 aa22.4■■□□□ 1.18
CTDP1-205ENST00000590599 RABL6Q3YEC7 729 aaPredicted RBP22.4■■□□□ 1.18
CTDP1-205ENST00000590599 PCCAP05165 728 aaPredicted RBP22.39■■□□□ 1.17
CTDP1-205ENST00000590599 FAM161AQ3B820 660 aa22.39■■□□□ 1.17
CTDP1-205ENST00000590599 ZNF652Q9Y2D9 606 aa22.39■■□□□ 1.17
CTDP1-205ENST00000590599 UBR3Q6ZT12 1888 aa22.39■■□□□ 1.17
CTDP1-205ENST00000590599 RPS6KA4O75676 772 aa22.38■■□□□ 1.17
CTDP1-205ENST00000590599 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
CTDP1-205ENST00000590599 SCN7AQ01118 1682 aa22.38■■□□□ 1.17
CTDP1-205ENST00000590599 OS9Q13438 667 aaPredicted RBP22.38■■□□□ 1.17
CTDP1-205ENST00000590599 ZNF34Q8IZ26 560 aa22.38■■□□□ 1.17
CTDP1-205ENST00000590599 NOP58Q9Y2X3 529 aaKnown RBP22.38■■□□□ 1.17
CTDP1-205ENST00000590599 BACH2Q9BYV9 841 aa22.37■■□□□ 1.17
CTDP1-205ENST00000590599 RTCBQ9Y3I0 505 aaKnown RBP22.37■■□□□ 1.17
CTDP1-205ENST00000590599 FOXO4P98177 505 aa22.36■■□□□ 1.17
CTDP1-205ENST00000590599 AK7Q96M32 723 aa22.36■■□□□ 1.17
CTDP1-205ENST00000590599 LMBR1LQ6UX01 489 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 COL23A1Q86Y22 540 aaPredicted RBP22.35■■□□□ 1.17
CTDP1-205ENST00000590599 KIF1BPQ96EK5 621 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 FAM89AQ96GI7 184 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 PPP1R1BQ9UD71 204 aaPredicted RBP22.35■■□□□ 1.17
CTDP1-205ENST00000590599 PA2G4Q9UQ80 394 aaKnown RBP22.35■■□□□ 1.17
CTDP1-205ENST00000590599 UBN2Q6ZU65 1347 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 ERC1Q8IUD2 1116 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 C16orf71Q8IYS4 520 aaPredicted RBP22.35■■□□□ 1.17
CTDP1-205ENST00000590599 SGIP1Q9BQI5 828 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 CDHR2Q9BYE9 1310 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 TRMT112Q9UI30 125 aaKnown RBP22.35■■□□□ 1.17
CTDP1-205ENST00000590599 CHMP3Q9Y3E7 222 aa22.35■■□□□ 1.17
CTDP1-205ENST00000590599 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
CTDP1-205ENST00000590599 PLEKHM2Q8IWE5 1019 aa22.34■■□□□ 1.17
CTDP1-205ENST00000590599 RHPN1Q8TCX5 695 aa22.34■■□□□ 1.17
CTDP1-205ENST00000590599 MTFR1LQ9H019 292 aa22.34■■□□□ 1.17
CTDP1-205ENST00000590599 RGL2O15211 777 aa22.33■■□□□ 1.17
CTDP1-205ENST00000590599 MSH5O43196 834 aa22.33■■□□□ 1.17
CTDP1-205ENST00000590599 C8orf34Q49A92 452 aa22.33■■□□□ 1.17
CTDP1-205ENST00000590599 PARP10Q53GL7 1025 aa22.33■■□□□ 1.17
CTDP1-205ENST00000590599 HMGB2P26583 209 aaKnown RBP22.33■■□□□ 1.16
CTDP1-205ENST00000590599 G3BP1Q13283 466 aaKnown RBP eCLIP22.33■■□□□ 1.16
CTDP1-205ENST00000590599 OTUD7AQ8TE49 926 aaPredicted RBP22.33■■□□□ 1.16
CTDP1-205ENST00000590599 PLA2G12BQ9BX93 195 aa22.33■■□□□ 1.16
CTDP1-205ENST00000590599 NIP7Q9Y221 180 aaKnown RBP eCLIP22.33■■□□□ 1.16
CTDP1-205ENST00000590599 PHF14O94880 888 aa22.32■■□□□ 1.16
CTDP1-205ENST00000590599 MSL1Q68DK7 614 aa22.32■■□□□ 1.16
CTDP1-205ENST00000590599 NARFQ9UHQ1 456 aa22.32■■□□□ 1.16
CTDP1-205ENST00000590599 C4AP0C0L4 1744 aa22.31■■□□□ 1.16
CTDP1-205ENST00000590599 ZPR1O75312 459 aa22.31■■□□□ 1.16
CTDP1-205ENST00000590599 IL1RAPL2Q9NP60 686 aa22.31■■□□□ 1.16
CTDP1-205ENST00000590599 COPRSQ9NQ92 184 aa22.31■■□□□ 1.16
CTDP1-205ENST00000590599 COL24A1Q17RW2 1714 aa22.31■■□□□ 1.16
CTDP1-205ENST00000590599 MYH3P11055 1940 aa22.31■■□□□ 1.16
CTDP1-205ENST00000590599 RFX5P48382 616 aaPredicted RBP22.3■■□□□ 1.16
CTDP1-205ENST00000590599 BMP2KLQ5H9B9 411 aa22.3■■□□□ 1.16
CTDP1-205ENST00000590599 UTP14AQ9BVJ6 771 aaKnown RBP22.3■■□□□ 1.16
CTDP1-205ENST00000590599 SIL1Q9H173 461 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms