RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 UPF1Q92900 1129 aaKnown RBP eCLIP11.78□□□□□ -0.52
ZNF397-208ENST00000590470 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
ZNF397-208ENST00000590470 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
ZNF397-208ENST00000590470 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
ZNF397-208ENST00000590470 NIP7Q9Y221 180 aaKnown RBP eCLIP11.78□□□□□ -0.52
ZNF397-208ENST00000590470 SUSD4Q5VX71 490 aa11.77□□□□□ -0.53
ZNF397-208ENST00000590470 ERICH6BQ5W0A0 696 aa11.77□□□□□ -0.53
ZNF397-208ENST00000590470 FAM89AQ96GI7 184 aa11.77□□□□□ -0.53
ZNF397-208ENST00000590470 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
ZNF397-208ENST00000590470 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
ZNF397-208ENST00000590470 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
ZNF397-208ENST00000590470 GNAI2P04899 355 aa11.76□□□□□ -0.53
ZNF397-208ENST00000590470 GNAI3P08754 354 aa11.76□□□□□ -0.53
ZNF397-208ENST00000590470 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
ZNF397-208ENST00000590470 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
ZNF397-208ENST00000590470 NUTM1Q86Y26 1132 aa11.76□□□□□ -0.53
ZNF397-208ENST00000590470 CCDC85AQ96PX6 553 aaPredicted RBP11.76□□□□□ -0.53
ZNF397-208ENST00000590470 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
ZNF397-208ENST00000590470 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
ZNF397-208ENST00000590470 DDX60Q8IY21 1712 aaKnown RBP11.76□□□□□ -0.53
ZNF397-208ENST00000590470 COL24A1Q17RW2 1714 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 H7C1W4 665 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 GYS1P13807 737 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 SSFA2P28290 1259 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 CASP7P55210 303 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 SLC15A2Q16348 729 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 CCDC191Q8NCU4 936 aa11.75□□□□□ -0.53
ZNF397-208ENST00000590470 BICC1Q9H694 974 aaKnown RBP11.75□□□□□ -0.53
ZNF397-208ENST00000590470 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
ZNF397-208ENST00000590470 LAMB2P55268 1798 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
ZNF397-208ENST00000590470 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 ZNF652Q9Y2D9 606 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 UTYO14607 1347 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 QSER1Q2KHR3 1735 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 TAF1P21675 1872 aa11.74□□□□□ -0.53
ZNF397-208ENST00000590470 APBB1O00213 710 aa11.73□□□□□ -0.53
ZNF397-208ENST00000590470 MYH3P11055 1940 aa11.73□□□□□ -0.53
ZNF397-208ENST00000590470 FOXO4P98177 505 aa11.73□□□□□ -0.53
ZNF397-208ENST00000590470 NFIXQ14938 502 aa11.73□□□□□ -0.53
ZNF397-208ENST00000590470 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
ZNF397-208ENST00000590470 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
ZNF397-208ENST00000590470 KLHDC4Q8TBB5 520 aa11.73□□□□□ -0.53
ZNF397-208ENST00000590470 TNRC6CQ9HCJ0 1690 aaKnown RBP11.72□□□□□ -0.53
ZNF397-208ENST00000590470 KDM2BQ8NHM5 1336 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 NTSR2O95665 410 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 PCCAP05165 728 aaPredicted RBP11.72□□□□□ -0.53
ZNF397-208ENST00000590470 ADRA2BP18089 450 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
ZNF397-208ENST00000590470 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 ZBTB38Q8NAP3 1195 aaPredicted RBP11.72□□□□□ -0.53
ZNF397-208ENST00000590470 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 UTP14AQ9BVJ6 771 aaKnown RBP11.72□□□□□ -0.53
ZNF397-208ENST00000590470 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
ZNF397-208ENST00000590470 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
ZNF397-208ENST00000590470 COL4A1P02462 1669 aa11.71□□□□□ -0.53
ZNF397-208ENST00000590470 ABCC12Q96J65 1359 aa11.71□□□□□ -0.53
ZNF397-208ENST00000590470 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
ZNF397-208ENST00000590470 SRGAP3O43295 1099 aa11.71□□□□□ -0.53
ZNF397-208ENST00000590470 DDR1Q08345 913 aa11.71□□□□□ -0.53
ZNF397-208ENST00000590470 LMBR1LQ6UX01 489 aa11.71□□□□□ -0.53
ZNF397-208ENST00000590470 CLEC4GQ6UXB4 293 aa11.71□□□□□ -0.53
ZNF397-208ENST00000590470 RWDD1Q9H446 243 aaPredicted RBP11.71□□□□□ -0.53
ZNF397-208ENST00000590470 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
ZNF397-208ENST00000590470 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
ZNF397-208ENST00000590470 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
ZNF397-208ENST00000590470 AAMPQ13685 434 aa11.7□□□□□ -0.54
ZNF397-208ENST00000590470 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
ZNF397-208ENST00000590470 RPAP2Q8IXW5 612 aaPredicted RBP11.7□□□□□ -0.54
ZNF397-208ENST00000590470 ZNF594Q96JF6 807 aaPredicted RBP11.7□□□□□ -0.54
ZNF397-208ENST00000590470 EXOC6BQ9Y2D4 811 aa11.7□□□□□ -0.54
ZNF397-208ENST00000590470 SH3TC1Q8TE82 1336 aa11.69□□□□□ -0.54
ZNF397-208ENST00000590470 GTF2E1P29083 439 aaPredicted RBP11.69□□□□□ -0.54
ZNF397-208ENST00000590470 TM4SF1P30408 202 aa11.69□□□□□ -0.54
ZNF397-208ENST00000590470 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
ZNF397-208ENST00000590470 R3HDM1Q15032 1099 aaKnown RBP11.69□□□□□ -0.54
ZNF397-208ENST00000590470 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
ZNF397-208ENST00000590470 SIL1Q9H173 461 aa11.69□□□□□ -0.54
ZNF397-208ENST00000590470 CARMIL3Q8ND23 1372 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 CDHR2Q9BYE9 1310 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 NPHP1O15259 732 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 SERPINB2P05120 415 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 POLA2Q14181 598 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 CENPQQ7L2Z9 268 aaPredicted RBP11.68□□□□□ -0.54
ZNF397-208ENST00000590470 SSH3Q8TE77 659 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
ZNF397-208ENST00000590470 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
ZNF397-208ENST00000590470 PDE8AO60658 829 aa11.67□□□□□ -0.54
ZNF397-208ENST00000590470 SURF6O75683 361 aaKnown RBP11.67□□□□□ -0.54
ZNF397-208ENST00000590470 ZBTB7AO95365 584 aa11.67□□□□□ -0.54
ZNF397-208ENST00000590470 MMP10P09238 476 aa11.67□□□□□ -0.54
ZNF397-208ENST00000590470 RABL6Q3YEC7 729 aaPredicted RBP11.67□□□□□ -0.54
ZNF397-208ENST00000590470 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms