RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DDX11Q96FC9 970 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 FMNL2Q96PY5 1086 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 ZSWIM4Q9H7M6 989 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
CIRBP-228ENST00000590347 STK3Q13188 491 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 DNAI1Q9UI46 699 aa17.87■□□□□ 0.45
CIRBP-228ENST00000590347 ZFYVE9O95405 1425 aa17.86■□□□□ 0.45
CIRBP-228ENST00000590347 KNDC1Q76NI1 1749 aa17.86■□□□□ 0.45
CIRBP-228ENST00000590347 CCZ1BP86790 482 aa17.86■□□□□ 0.45
CIRBP-228ENST00000590347 CCZ1P86791 482 aaPredicted RBP17.86■□□□□ 0.45
CIRBP-228ENST00000590347 TXLNBQ8N3L3 684 aa17.86■□□□□ 0.45
CIRBP-228ENST00000590347 UBXN4Q92575 508 aa17.86■□□□□ 0.45
CIRBP-228ENST00000590347 SNX14Q9Y5W7 946 aa17.86■□□□□ 0.45
CIRBP-228ENST00000590347 TNRQ92752 1358 aa17.86■□□□□ 0.45
CIRBP-228ENST00000590347 CWC27Q6UX04 472 aaKnown RBP17.85■□□□□ 0.45
CIRBP-228ENST00000590347 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 URI1O94763 535 aaPredicted RBP17.85■□□□□ 0.45
CIRBP-228ENST00000590347 LARP1BQ659C4 914 aaKnown RBP17.85■□□□□ 0.45
CIRBP-228ENST00000590347 CARD6Q9BX69 1037 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
CIRBP-228ENST00000590347 ATP6V1DQ9Y5K8 247 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 ATP10DQ9P241 1426 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 GOLGA8FQ08AF8 430 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 GOLGA8DPQ0D2H9 430 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 ADCK5Q3MIX3 580 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 CT47A1Q5JQC4 288 aaPredicted RBP17.85■□□□□ 0.45
CIRBP-228ENST00000590347 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
CIRBP-228ENST00000590347 BECN2A8MW95 431 aa17.84■□□□□ 0.45
CIRBP-228ENST00000590347 PSEN1P49768 467 aa17.84■□□□□ 0.45
CIRBP-228ENST00000590347 FAM212AQ96EL1 285 aa17.84■□□□□ 0.45
CIRBP-228ENST00000590347 LIMCH1Q9UPQ0 1083 aa17.84■□□□□ 0.45
CIRBP-228ENST00000590347 JRKLQ9Y4A0 524 aa17.84■□□□□ 0.45
CIRBP-228ENST00000590347 SRLQ86TD4 932 aa17.84■□□□□ 0.45
CIRBP-228ENST00000590347 TPM4P67936 248 aa17.83■□□□□ 0.45
CIRBP-228ENST00000590347 SMC1AQ14683 1233 aaKnown RBP17.83■□□□□ 0.45
CIRBP-228ENST00000590347 TTLL5Q6EMB2 1281 aa17.83■□□□□ 0.45
CIRBP-228ENST00000590347 ISM2Q6H9L7 571 aa17.83■□□□□ 0.45
CIRBP-228ENST00000590347 RPAP2Q8IXW5 612 aaPredicted RBP17.83■□□□□ 0.45
CIRBP-228ENST00000590347 MNS1Q8NEH6 495 aa17.83■□□□□ 0.45
CIRBP-228ENST00000590347 ZC3H13Q5T200 1668 aaKnown RBP17.83■□□□□ 0.45
CIRBP-228ENST00000590347 SPATA32Q96LK8 384 aa17.83■□□□□ 0.44
CIRBP-228ENST00000590347 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.83■□□□□ 0.446e-7■□□□□ 11
CIRBP-228ENST00000590347 PTCH1Q13635 1447 aa17.83■□□□□ 0.44
CIRBP-228ENST00000590347 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.44
CIRBP-228ENST00000590347 PHACTR2O75167 634 aa17.82■□□□□ 0.44
CIRBP-228ENST00000590347 KRT85P78386 507 aa17.82■□□□□ 0.44
CIRBP-228ENST00000590347 G2E3Q7L622 706 aa17.82■□□□□ 0.44
CIRBP-228ENST00000590347 GEMIN8Q9NWZ8 242 aaKnown RBP17.82■□□□□ 0.44
CIRBP-228ENST00000590347 PNMA6EA0A0J9YXQ4 647 aa17.82■□□□□ 0.44
CIRBP-228ENST00000590347 GNAI1P63096 354 aa17.82■□□□□ 0.44
CIRBP-228ENST00000590347 E4F1Q66K89 784 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-228ENST00000590347 TDRD7Q8NHU6 1098 aaKnown RBP17.82■□□□□ 0.44
CIRBP-228ENST00000590347 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 REXO1L1PQ8IX06 675 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 FTOQ9C0B1 505 aaKnown RBP eCLIP17.81■□□□□ 0.448e-7■□□□□ 9.3
CIRBP-228ENST00000590347 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 LMOD3Q0VAK6 560 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 ST3GAL1Q11201 340 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 TSGA10IPQ3SY00 556 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 PPP1R13BQ96KQ4 1090 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 ORC3Q9UBD5 711 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-228ENST00000590347 TAOK2Q9UL54 1235 aa17.81■□□□□ 0.44
CIRBP-228ENST00000590347 ARHGEF40Q8TER5 1519 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 DNAJC21Q5F1R6 531 aaKnown RBP17.8■□□□□ 0.44
CIRBP-228ENST00000590347 H3BQF6 201 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 ZRANB2O95218 330 aaKnown RBP eCLIP17.8■□□□□ 0.44
CIRBP-228ENST00000590347 SLC4A2P04920 1241 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 HSPA4P34932 840 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 GPS2Q13227 327 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 ME3Q16798 604 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 TTC31Q49AM3 519 aaPredicted RBP17.8■□□□□ 0.44
CIRBP-228ENST00000590347 PUS7Q96PZ0 661 aaKnown RBP17.8■□□□□ 0.44
CIRBP-228ENST00000590347 ADAM21Q9UKJ8 722 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 PIK3R4Q99570 1358 aa17.8■□□□□ 0.44
CIRBP-228ENST00000590347 SMC2O95347 1197 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 TBC1D8O95759 1140 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 GNAI3P08754 354 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 NUTM2GQ5VZR2 741 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
CIRBP-228ENST00000590347 AOPEPQ8N6M6 819 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 HDGFP51858 240 aaKnown RBP17.79■□□□□ 0.44
CIRBP-228ENST00000590347 ANAPC15P60006 121 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 MCM6Q14566 821 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 WWC2Q6AWC2 1192 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 TMC6Q7Z403 805 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 MYCBPQ99417 103 aaPredicted RBP17.79■□□□□ 0.44
CIRBP-228ENST00000590347 VPS18Q9P253 973 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 CCDC61Q9Y6R9 512 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
CIRBP-228ENST00000590347 EVCP57679 992 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 BANK1Q8NDB2 785 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 PGBD1Q96JS3 809 aa17.78■□□□□ 0.44
CIRBP-228ENST00000590347 LRRCC1Q9C099 1032 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms