RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 MASTLQ96GX5 879 aa23.56■■□□□ 1.36
DDX39A-212ENST00000590260 ISCA1Q9BUE6 129 aa23.56■■□□□ 1.36
DDX39A-212ENST00000590260 RASSF7Q02833 373 aa23.55■■□□□ 1.36
DDX39A-212ENST00000590260 CCDC30Q5VVM6 783 aa23.55■■□□□ 1.36
DDX39A-212ENST00000590260 DDX60Q8IY21 1712 aaKnown RBP23.54■■□□□ 1.36
DDX39A-212ENST00000590260 NFKBIEO00221 500 aa23.54■■□□□ 1.36
DDX39A-212ENST00000590260 VAMP4O75379 141 aa23.54■■□□□ 1.36
DDX39A-212ENST00000590260 PRPF40BQ6NWY9 871 aaKnown RBP23.54■■□□□ 1.36
DDX39A-212ENST00000590260 G2E3Q7L622 706 aa23.54■■□□□ 1.36
DDX39A-212ENST00000590260 MIER1Q8N108 512 aa23.54■■□□□ 1.36
DDX39A-212ENST00000590260 C7orf43Q8WVR3 580 aa23.54■■□□□ 1.36
DDX39A-212ENST00000590260 C21orf2O43822 256 aa23.53■■□□□ 1.36
DDX39A-212ENST00000590260 NPR1P16066 1061 aa23.53■■□□□ 1.36
DDX39A-212ENST00000590260 HSP90AB3PQ58FF7 597 aa23.53■■□□□ 1.36
DDX39A-212ENST00000590260 SLC10A5Q5PT55 438 aa23.53■■□□□ 1.36
DDX39A-212ENST00000590260 DIEXFQ68CQ4 756 aaKnown RBP23.53■■□□□ 1.36
DDX39A-212ENST00000590260 SLC51AQ86UW1 340 aa23.53■■□□□ 1.36
DDX39A-212ENST00000590260 UTP14AQ9BVJ6 771 aaKnown RBP23.53■■□□□ 1.36
DDX39A-212ENST00000590260 ZNF219Q9P2Y4 722 aaPredicted RBP23.53■■□□□ 1.36
DDX39A-212ENST00000590260 ATP5J2-PTCD1G3V325 749 aa23.52■■□□□ 1.36
DDX39A-212ENST00000590260 GTF2E1P29083 439 aaPredicted RBP23.52■■□□□ 1.36
DDX39A-212ENST00000590260 PPP1R42Q7Z4L9 355 aa23.52■■□□□ 1.36
DDX39A-212ENST00000590260 CNKSR1Q969H4 720 aa23.52■■□□□ 1.36
DDX39A-212ENST00000590260 SNED1Q8TER0 1413 aa23.51■■□□□ 1.35
DDX39A-212ENST00000590260 C9orf131Q5VYM1 1079 aa23.51■■□□□ 1.35
DDX39A-212ENST00000590260 OLFM4Q6UX06 510 aa23.51■■□□□ 1.35
DDX39A-212ENST00000590260 CCDC88AQ3V6T2 1871 aa23.5■■□□□ 1.35
DDX39A-212ENST00000590260 COL4A1P02462 1669 aa23.49■■□□□ 1.35
DDX39A-212ENST00000590260 HOXA10P31260 410 aaPredicted RBP23.49■■□□□ 1.35
DDX39A-212ENST00000590260 GOLGA2Q08379 1002 aa23.49■■□□□ 1.35
DDX39A-212ENST00000590260 TRIM28Q13263 835 aaKnown RBP23.48■■□□□ 1.35
DDX39A-212ENST00000590260 RIC3Q7Z5B4 369 aa23.48■■□□□ 1.35
DDX39A-212ENST00000590260 RNF123Q5XPI4 1314 aa23.48■■□□□ 1.35
DDX39A-212ENST00000590260 HCLS1P14317 486 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-212ENST00000590260 MYH16Q9H6N6 1097 aa23.47■■□□□ 1.35
DDX39A-212ENST00000590260 TRMT112Q9UI30 125 aaKnown RBP23.47■■□□□ 1.35
DDX39A-212ENST00000590260 TIAM2Q8IVF5 1701 aa23.47■■□□□ 1.35
DDX39A-212ENST00000590260 SLC4A2P04920 1241 aa23.46■■□□□ 1.35
DDX39A-212ENST00000590260 FAM89AQ96GI7 184 aa23.46■■□□□ 1.35
DDX39A-212ENST00000590260 MYD88Q99836 296 aa23.46■■□□□ 1.35
DDX39A-212ENST00000590260 METTL22Q9BUU2 404 aaPredicted RBP23.46■■□□□ 1.35
DDX39A-212ENST00000590260 RNF181Q9P0P0 153 aa23.46■■□□□ 1.35
DDX39A-212ENST00000590260 TAF1P21675 1872 aa23.45■■□□□ 1.35
DDX39A-212ENST00000590260 SH3TC1Q8TE82 1336 aa23.45■■□□□ 1.34
DDX39A-212ENST00000590260 CDCA7LQ96GN5 454 aa23.45■■□□□ 1.34
DDX39A-212ENST00000590260 MAP3K2Q9Y2U5 619 aa23.45■■□□□ 1.34
DDX39A-212ENST00000590260 PI4KAP2A4QPH2 592 aa23.44■■□□□ 1.34
DDX39A-212ENST00000590260 IGKV5-2P06315 115 aa23.44■■□□□ 1.34
DDX39A-212ENST00000590260 KSR2Q6VAB6 950 aa23.44■■□□□ 1.34
DDX39A-212ENST00000590260 PI4KAP1Q8N8J0 262 aa23.44■■□□□ 1.34
DDX39A-212ENST00000590260 STK31Q9BXU1 1019 aa23.44■■□□□ 1.34
DDX39A-212ENST00000590260 DICER1Q9UPY3 1922 aaKnown RBP23.43■■□□□ 1.34
DDX39A-212ENST00000590260 LTBP3Q9NS15 1303 aa23.43■■□□□ 1.34
DDX39A-212ENST00000590260 ALDH1B1P30837 517 aa23.43■■□□□ 1.34
DDX39A-212ENST00000590260 SLFN5Q08AF3 891 aa23.43■■□□□ 1.34
DDX39A-212ENST00000590260 ZNF526Q8TF50 670 aaPredicted RBP23.43■■□□□ 1.34
DDX39A-212ENST00000590260 NLRP3Q96P20 1036 aa23.43■■□□□ 1.34
DDX39A-212ENST00000590260 CRAMP1Q96RY5 1269 aa23.43■■□□□ 1.34
DDX39A-212ENST00000590260 CHMP4AQ9BY43 222 aa23.43■■□□□ 1.34
DDX39A-212ENST00000590260 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
DDX39A-212ENST00000590260 LMNB1P20700 586 aa23.42■■□□□ 1.34
DDX39A-212ENST00000590260 FLIIQ13045 1269 aa23.42■■□□□ 1.34
DDX39A-212ENST00000590260 RTL5Q5HYW3 569 aaPredicted RBP23.42■■□□□ 1.34
DDX39A-212ENST00000590260 ABCC4O15439 1325 aa23.41■■□□□ 1.34
DDX39A-212ENST00000590260 TRMT2AQ8IZ69 625 aaKnown RBP23.41■■□□□ 1.34
DDX39A-212ENST00000590260 RPGRQ92834 1020 aaKnown RBP23.41■■□□□ 1.34
DDX39A-212ENST00000590260 DDX58O95786 925 aaKnown RBP23.4■■□□□ 1.34
DDX39A-212ENST00000590260 JARID2Q92833 1246 aaPredicted RBP23.4■■□□□ 1.34
DDX39A-212ENST00000590260 E9PSI1 815 aa23.39■■□□□ 1.33
DDX39A-212ENST00000590260 CCDC93Q567U6 631 aa23.39■■□□□ 1.33
DDX39A-212ENST00000590260 CCDC191Q8NCU4 936 aa23.39■■□□□ 1.33
DDX39A-212ENST00000590260 RBM17Q96I25 401 aaKnown RBP23.39■■□□□ 1.33
DDX39A-212ENST00000590260 CWF19L2Q2TBE0 894 aaKnown RBP23.38■■□□□ 1.33
DDX39A-212ENST00000590260 ZBTB38Q8NAP3 1195 aaPredicted RBP23.38■■□□□ 1.33
DDX39A-212ENST00000590260 TAOK3Q9H2K8 898 aa23.38■■□□□ 1.33
DDX39A-212ENST00000590260 COL4A5P29400 1685 aa23.38■■□□□ 1.33
DDX39A-212ENST00000590260 IRS4O14654 1257 aaPredicted RBP23.37■■□□□ 1.33
DDX39A-212ENST00000590260 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
DDX39A-212ENST00000590260 GPBP1L1Q9HC44 474 aaPredicted RBP23.37■■□□□ 1.33
DDX39A-212ENST00000590260 NEURL1BA8MQ27 555 aa23.36■■□□□ 1.33
DDX39A-212ENST00000590260 KIF3CO14782 793 aa23.36■■□□□ 1.33
DDX39A-212ENST00000590260 PPEF1O14829 653 aaPredicted RBP23.36■■□□□ 1.33
DDX39A-212ENST00000590260 PCCAP05165 728 aaPredicted RBP23.36■■□□□ 1.33
DDX39A-212ENST00000590260 SF3B3Q15393 1217 aaKnown RBP23.36■■□□□ 1.33
DDX39A-212ENST00000590260 CWC25Q9NXE8 425 aaPredicted RBP23.36■■□□□ 1.33
DDX39A-212ENST00000590260 LRRC37AA6NMS7 1700 aa23.36■■□□□ 1.33
DDX39A-212ENST00000590260 FKBP4Q02790 459 aaKnown RBP eCLIP23.35■■□□□ 1.33
DDX39A-212ENST00000590260 NMRK2Q9NPI5 230 aa23.35■■□□□ 1.33
DDX39A-212ENST00000590260 F6X3S4 739 aa23.34■■□□□ 1.33
DDX39A-212ENST00000590260 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-212ENST00000590260 ZNF277Q9NRM2 450 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-212ENST00000590260 DNAAF4Q8WXU2 420 aa23.33■■□□□ 1.33
DDX39A-212ENST00000590260 CELF1Q92879 486 aaKnown RBP23.33■■□□□ 1.33
DDX39A-212ENST00000590260 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.32
DDX39A-212ENST00000590260 DUOX1Q9NRD9 1551 aa23.32■■□□□ 1.32
DDX39A-212ENST00000590260 GRAPQ13588 217 aa23.32■■□□□ 1.32
DDX39A-212ENST00000590260 RTKN2Q8IZC4 609 aa23.32■■□□□ 1.32
DDX39A-212ENST00000590260 GRAPLQ8TC17 118 aaPredicted RBP23.32■■□□□ 1.32
DDX39A-212ENST00000590260 ATP6V0A2Q9Y487 856 aa23.32■■□□□ 1.32
DDX39A-212ENST00000590260 CDHR2Q9BYE9 1310 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms