RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 RBM43Q6ZSC3 357 aaKnown RBP18.64■□□□□ 0.58
MBD1-222ENST00000590208 DDX19AQ9NUU7 478 aaKnown RBP18.64■□□□□ 0.58
MBD1-222ENST00000590208 TTC21BQ7Z4L5 1316 aa18.64■□□□□ 0.57
MBD1-222ENST00000590208 USP16Q9Y5T5 823 aa18.64■□□□□ 0.57
MBD1-222ENST00000590208 TAF6LQ9Y6J9 622 aa18.64■□□□□ 0.57
MBD1-222ENST00000590208 NPHP3Q7Z494 1330 aa18.64■□□□□ 0.57
MBD1-222ENST00000590208 TM6SF1Q9BZW5 370 aa18.63■□□□□ 0.57
MBD1-222ENST00000590208 RBM8AQ9Y5S9 174 aaKnown RBP18.63■□□□□ 0.57
MBD1-222ENST00000590208 SKILP12757 684 aa18.63■□□□□ 0.57
MBD1-222ENST00000590208 PTPN14Q15678 1187 aa18.63■□□□□ 0.57
MBD1-222ENST00000590208 FILIP1Q7Z7B0 1213 aa18.63■□□□□ 0.57
MBD1-222ENST00000590208 SCAND2PQ9GZW5 306 aaPredicted RBP18.63■□□□□ 0.57
MBD1-222ENST00000590208 OS9Q13438 667 aaPredicted RBP18.63■□□□□ 0.57
MBD1-222ENST00000590208 CREB3L3Q68CJ9 461 aa18.63■□□□□ 0.57
MBD1-222ENST00000590208 METP08581 1390 aa18.63■□□□□ 0.57
MBD1-222ENST00000590208 C11orf57Q6ZUT1 292 aaPredicted RBP18.62■□□□□ 0.57
MBD1-222ENST00000590208 FAM227BQ96M60 508 aa18.62■□□□□ 0.57
MBD1-222ENST00000590208 C3P01024 1663 aa18.62■□□□□ 0.57
MBD1-222ENST00000590208 GLRX3O76003 335 aaKnown RBP18.62■□□□□ 0.57
MBD1-222ENST00000590208 ZKSCAN1P17029 563 aaPredicted RBP18.62■□□□□ 0.57
MBD1-222ENST00000590208 NYAP1Q6ZVC0 841 aa18.62■□□□□ 0.57
MBD1-222ENST00000590208 RUFY2Q8WXA3 655 aa18.62■□□□□ 0.57
MBD1-222ENST00000590208 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
MBD1-222ENST00000590208 IRX5P78411 483 aaPredicted RBP18.61■□□□□ 0.57
MBD1-222ENST00000590208 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
MBD1-222ENST00000590208 MON2Q7Z3U7 1717 aa18.61■□□□□ 0.57
MBD1-222ENST00000590208 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
MBD1-222ENST00000590208 CCDC171Q6TFL3 1326 aa18.61■□□□□ 0.57
MBD1-222ENST00000590208 SYTL4Q96C24 671 aaPredicted RBP18.61■□□□□ 0.57
MBD1-222ENST00000590208 ERBB3P21860 1342 aa18.61■□□□□ 0.57
MBD1-222ENST00000590208 CEBPZQ03701 1054 aaKnown RBP18.6■□□□□ 0.57
MBD1-222ENST00000590208 IQCB1Q15051 598 aa18.6■□□□□ 0.57
MBD1-222ENST00000590208 KCNB2Q92953 911 aa18.6■□□□□ 0.57
MBD1-222ENST00000590208 GOLGA6L19H0YKK7 550 aa18.6■□□□□ 0.57
MBD1-222ENST00000590208 ZNF446Q9NWS9 450 aa18.6■□□□□ 0.57
MBD1-222ENST00000590208 MAP3K5Q99683 1374 aa18.6■□□□□ 0.57
MBD1-222ENST00000590208 PDCP20941 246 aa18.6■□□□□ 0.57
MBD1-222ENST00000590208 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
MBD1-222ENST00000590208 EYA1Q99502 592 aa18.6■□□□□ 0.57
MBD1-222ENST00000590208 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
MBD1-222ENST00000590208 EIF2S2P20042 333 aaKnown RBP18.59■□□□□ 0.57
MBD1-222ENST00000590208 HDGFL1Q5TGJ6 251 aa18.59■□□□□ 0.57
MBD1-222ENST00000590208 ACEP12821 1306 aa18.59■□□□□ 0.57
MBD1-222ENST00000590208 JAK2O60674 1132 aa18.59■□□□□ 0.57
MBD1-222ENST00000590208 FAM53CQ9NYF3 392 aa18.59■□□□□ 0.57
MBD1-222ENST00000590208 SLC27A2O14975 620 aa18.58■□□□□ 0.57
MBD1-222ENST00000590208 CCZ1BP86790 482 aa18.58■□□□□ 0.57
MBD1-222ENST00000590208 CCZ1P86791 482 aaPredicted RBP18.58■□□□□ 0.57
MBD1-222ENST00000590208 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.56
MBD1-222ENST00000590208 LRRN4CLQ8ND94 238 aa18.58■□□□□ 0.56
MBD1-222ENST00000590208 PA2G4Q9UQ80 394 aaKnown RBP18.58■□□□□ 0.56
MBD1-222ENST00000590208 CCDC66A2RUB6 948 aa18.57■□□□□ 0.56
MBD1-222ENST00000590208 CDC25BP30305 580 aa18.57■□□□□ 0.56
MBD1-222ENST00000590208 IL17REQ8NFR9 667 aa18.57■□□□□ 0.56
MBD1-222ENST00000590208 FBXW7Q969H0 707 aa18.57■□□□□ 0.56
MBD1-222ENST00000590208 ERO1AQ96HE7 468 aa18.57■□□□□ 0.56
MBD1-222ENST00000590208 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
MBD1-222ENST00000590208 NMIQ13287 307 aaPredicted RBP18.57■□□□□ 0.56
MBD1-222ENST00000590208 TOB2Q14106 344 aaPredicted RBP18.57■□□□□ 0.56
MBD1-222ENST00000590208 ERCC4Q92889 916 aaPredicted RBP18.57■□□□□ 0.56
MBD1-222ENST00000590208 ECHDC1Q9NTX5 307 aa18.57■□□□□ 0.56
MBD1-222ENST00000590208 TTC41PQ6P2S7 1318 aa18.57■□□□□ 0.56
MBD1-222ENST00000590208 ANXA1P04083 346 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 CCAR2Q8N163 923 aaKnown RBP18.56■□□□□ 0.56
MBD1-222ENST00000590208 CLASRPQ8N2M8 674 aaKnown RBP18.56■□□□□ 0.56
MBD1-222ENST00000590208 RGPD1P0DJD0 1748 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 ERCC6LQ2NKX8 1250 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 BLOC1S2Q6QNY1 142 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 MAP4K1Q92918 833 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 TRERF1Q96PN7 1200 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 SLU7O95391 586 aaKnown RBP18.56■□□□□ 0.56
MBD1-222ENST00000590208 GTF3C6Q969F1 213 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 MRFAP1L1Q96HT8 127 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 TIGD1Q96MW7 591 aa18.56■□□□□ 0.56
MBD1-222ENST00000590208 FTOQ9C0B1 505 aaKnown RBP eCLIP18.56■□□□□ 0.56
MBD1-222ENST00000590208 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
MBD1-222ENST00000590208 SARM1Q6SZW1 724 aa18.55■□□□□ 0.56
MBD1-222ENST00000590208 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.55■□□□□ 0.56
MBD1-222ENST00000590208 PI4KAP2A4QPH2 592 aa18.55■□□□□ 0.56
MBD1-222ENST00000590208 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
MBD1-222ENST00000590208 PI4KAP1Q8N8J0 262 aa18.55■□□□□ 0.56
MBD1-222ENST00000590208 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
MBD1-222ENST00000590208 BECN2A8MW95 431 aa18.54■□□□□ 0.56
MBD1-222ENST00000590208 CDK11BP21127 795 aaKnown RBP18.54■□□□□ 0.56
MBD1-222ENST00000590208 FOSBP53539 338 aa18.54■□□□□ 0.56
MBD1-222ENST00000590208 ADCY9O60503 1353 aa18.54■□□□□ 0.56
MBD1-222ENST00000590208 AKAP12Q02952 1782 aa18.54■□□□□ 0.56
MBD1-222ENST00000590208 A0A0D9SFI3 127 aa18.54■□□□□ 0.56
MBD1-222ENST00000590208 IFIT2P09913 472 aaKnown RBP18.54■□□□□ 0.56
MBD1-222ENST00000590208 PSMA5P28066 241 aa18.54■□□□□ 0.56
MBD1-222ENST00000590208 BRF1Q92994 677 aa18.54■□□□□ 0.56
MBD1-222ENST00000590208 RPS6KB1P23443 525 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 SETD1AO15047 1707 aaKnown RBP18.53■□□□□ 0.56
MBD1-222ENST00000590208 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 BEND3Q5T5X7 828 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 AACSQ86V21 672 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 EVI5LQ96CN4 794 aa18.53■□□□□ 0.56
MBD1-222ENST00000590208 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms