RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MCM10Q7L590 875 aa17.2■□□□□ 0.34
PRKCSH-210ENST00000589990 JDP2Q8WYK2 163 aa17.2■□□□□ 0.34
PRKCSH-210ENST00000589990 CASP8AP2Q9UKL3 1982 aa17.2■□□□□ 0.34
PRKCSH-210ENST00000589990 SNRPA1P09661 255 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 DCTN1Q14203 1278 aa17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 TLL2Q9Y6L7 1015 aa17.19■□□□□ 0.34
PRKCSH-210ENST00000589990 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-210ENST00000589990 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
PRKCSH-210ENST00000589990 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
PRKCSH-210ENST00000589990 RSPH6AQ9H0K4 717 aa17.18■□□□□ 0.34
PRKCSH-210ENST00000589990 ECE1P42892 770 aa17.17■□□□□ 0.34
PRKCSH-210ENST00000589990 C3orf67Q6ZVT6 689 aa17.17■□□□□ 0.34
PRKCSH-210ENST00000589990 CFAP44Q96MT7 982 aa17.17■□□□□ 0.34
PRKCSH-210ENST00000589990 BEGAINQ9BUH8 593 aa17.17■□□□□ 0.34
PRKCSH-210ENST00000589990 NUP98P52948 1817 aa17.17■□□□□ 0.34
PRKCSH-210ENST00000589990 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
PRKCSH-210ENST00000589990 LARGE2Q8N3Y3 721 aa17.16■□□□□ 0.34
PRKCSH-210ENST00000589990 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
PRKCSH-210ENST00000589990 ZIC5Q96T25 663 aa17.15■□□□□ 0.34
PRKCSH-210ENST00000589990 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
PRKCSH-210ENST00000589990 GPTP24298 496 aa17.14■□□□□ 0.33
PRKCSH-210ENST00000589990 USP50Q70EL3 339 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-210ENST00000589990 SAPCD2Q86UD0 394 aa17.14■□□□□ 0.33
PRKCSH-210ENST00000589990 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-210ENST00000589990 LAMB4A4D0S4 1761 aa17.14■□□□□ 0.33
PRKCSH-210ENST00000589990 UBN2Q6ZU65 1347 aa17.14■□□□□ 0.33
PRKCSH-210ENST00000589990 CELF2O95319 508 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-210ENST00000589990 AOC3Q16853 763 aa17.13■□□□□ 0.33
PRKCSH-210ENST00000589990 DLK2Q6UY11 383 aa17.13■□□□□ 0.33
PRKCSH-210ENST00000589990 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
PRKCSH-210ENST00000589990 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
PRKCSH-210ENST00000589990 PDE4DIPQ5VU43 2346 aa17.13■□□□□ 0.33
PRKCSH-210ENST00000589990 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
PRKCSH-210ENST00000589990 PPEF1O14829 653 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-210ENST00000589990 RGL2O15211 777 aa17.12■□□□□ 0.33
PRKCSH-210ENST00000589990 HOXA10P31260 410 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-210ENST00000589990 MAP2K2P36507 400 aa17.12■□□□□ 0.33
PRKCSH-210ENST00000589990 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-210ENST00000589990 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
PRKCSH-210ENST00000589990 SHTN1A0MZ66 631 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 CXCL9Q07325 125 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 DGKZQ13574 1117 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 CC2D2BQ6DHV5 1058 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 NIM1KQ8IY84 436 aa17.11■□□□□ 0.33
PRKCSH-210ENST00000589990 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-210ENST00000589990 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-210ENST00000589990 ZNF408Q9H9D4 720 aa17.1■□□□□ 0.33
PRKCSH-210ENST00000589990 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
PRKCSH-210ENST00000589990 NPC1L1Q9UHC9 1359 aa17.1■□□□□ 0.33
PRKCSH-210ENST00000589990 RTF1Q92541 710 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-210ENST00000589990 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
PRKCSH-210ENST00000589990 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
PRKCSH-210ENST00000589990 MAP3K15Q6ZN16 1313 aa17.09■□□□□ 0.33
PRKCSH-210ENST00000589990 NTSR2O95665 410 aa17.08■□□□□ 0.32
PRKCSH-210ENST00000589990 TRPM4Q8TD43 1214 aa17.08■□□□□ 0.32
PRKCSH-210ENST00000589990 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-210ENST00000589990 CRAMP1Q96RY5 1269 aa17.08■□□□□ 0.32
PRKCSH-210ENST00000589990 PCDH10Q9P2E7 1040 aa17.08■□□□□ 0.32
PRKCSH-210ENST00000589990 RRP7AQ9Y3A4 280 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-210ENST00000589990 ERVV-1B6SEH8 477 aa17.07■□□□□ 0.32
PRKCSH-210ENST00000589990 MYL6BP14649 208 aa17.07■□□□□ 0.32
PRKCSH-210ENST00000589990 BRPF1P55201 1214 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-210ENST00000589990 KDM3BQ7LBC6 1761 aa17.07■□□□□ 0.32
PRKCSH-210ENST00000589990 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-210ENST00000589990 U2AF1Q01081 240 aaKnown RBP eCLIP17.06■□□□□ 0.32
PRKCSH-210ENST00000589990 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-210ENST00000589990 ZNF34Q8IZ26 560 aa17.06■□□□□ 0.32
PRKCSH-210ENST00000589990 PGAP2Q9UHJ9 254 aa17.06■□□□□ 0.32
PRKCSH-210ENST00000589990 IBTKQ9P2D0 1353 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-210ENST00000589990 CA12O43570 354 aa17.05■□□□□ 0.32
PRKCSH-210ENST00000589990 RAD17O75943 681 aa17.05■□□□□ 0.32
PRKCSH-210ENST00000589990 HHIPL1Q96JK4 782 aa17.05■□□□□ 0.32
PRKCSH-210ENST00000589990 ZNRF3Q9ULT6 936 aa17.05■□□□□ 0.32
PRKCSH-210ENST00000589990 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
PRKCSH-210ENST00000589990 LAMB2P55268 1798 aa17.05■□□□□ 0.32
PRKCSH-210ENST00000589990 ABCC4O15439 1325 aa17.04■□□□□ 0.32
PRKCSH-210ENST00000589990 TAF1P21675 1872 aa17.04■□□□□ 0.32
PRKCSH-210ENST00000589990 SOX10P56693 466 aa17.04■□□□□ 0.32
PRKCSH-210ENST00000589990 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
PRKCSH-210ENST00000589990 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
PRKCSH-210ENST00000589990 YDJCA8MPS7 323 aa17.03■□□□□ 0.32
PRKCSH-210ENST00000589990 GRIPAP1Q4V328 841 aa17.03■□□□□ 0.32
PRKCSH-210ENST00000589990 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
PRKCSH-210ENST00000589990 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-210ENST00000589990 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-210ENST00000589990 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-210ENST00000589990 DUOX1Q9NRD9 1551 aa17.02■□□□□ 0.31
PRKCSH-210ENST00000589990 FAM155AB1AL88 458 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-210ENST00000589990 EGFRP00533 1210 aa17.01■□□□□ 0.31
PRKCSH-210ENST00000589990 HUNKP57058 714 aa17.01■□□□□ 0.31
PRKCSH-210ENST00000589990 CFAP53Q96M91 514 aa17.01■□□□□ 0.31
PRKCSH-210ENST00000589990 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms