RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
CCDC130-211ENST00000589669 EIF5P55010 431 aaKnown RBP17.42■□□□□ 0.38
CCDC130-211ENST00000589669 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
CCDC130-211ENST00000589669 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
CCDC130-211ENST00000589669 ZBTB1Q9Y2K1 713 aa17.42■□□□□ 0.38
CCDC130-211ENST00000589669 KCNQ3O43525 872 aa17.41■□□□□ 0.38
CCDC130-211ENST00000589669 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
CCDC130-211ENST00000589669 GPIHBP1Q8IV16 184 aa17.41■□□□□ 0.38
CCDC130-211ENST00000589669 ZC3H15Q8WU90 426 aaKnown RBP17.41■□□□□ 0.38
CCDC130-211ENST00000589669 LHX6Q9UPM6 363 aa17.41■□□□□ 0.38
CCDC130-211ENST00000589669 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
CCDC130-211ENST00000589669 FOSBP53539 338 aa17.4■□□□□ 0.38
CCDC130-211ENST00000589669 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
CCDC130-211ENST00000589669 USPL1Q5W0Q7 1092 aa17.4■□□□□ 0.38
CCDC130-211ENST00000589669 EPAS1Q99814 870 aa17.4■□□□□ 0.38
CCDC130-211ENST00000589669 MYBBP1AQ9BQG0 1328 aaKnown RBP17.4■□□□□ 0.38
CCDC130-211ENST00000589669 TJP1Q07157 1748 aa17.39■□□□□ 0.37
CCDC130-211ENST00000589669 A0A087WZG4 1122 aa17.39■□□□□ 0.37
CCDC130-211ENST00000589669 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
CCDC130-211ENST00000589669 ZNF454Q8N9F8 522 aa17.38■□□□□ 0.37
CCDC130-211ENST00000589669 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
CCDC130-211ENST00000589669 POLRMTO00411 1230 aaKnown RBP17.37■□□□□ 0.37
CCDC130-211ENST00000589669 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
CCDC130-211ENST00000589669 DDR1Q08345 913 aa17.37■□□□□ 0.37
CCDC130-211ENST00000589669 TYW1BQ6NUM6 668 aa17.37■□□□□ 0.37
CCDC130-211ENST00000589669 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
CCDC130-211ENST00000589669 BCL2L12Q9HB09 334 aa17.37■□□□□ 0.37
CCDC130-211ENST00000589669 COL15A1P39059 1388 aa17.37■□□□□ 0.37
CCDC130-211ENST00000589669 A0A0G2JLW4 131 aa17.36■□□□□ 0.37
CCDC130-211ENST00000589669 A1BGP04217 495 aa17.36■□□□□ 0.37
CCDC130-211ENST00000589669 ZNF784Q8NCA9 323 aaPredicted RBP17.36■□□□□ 0.37
CCDC130-211ENST00000589669 PRKRIP1Q9H875 184 aaPredicted RBP17.36■□□□□ 0.37
CCDC130-211ENST00000589669 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
CCDC130-211ENST00000589669 NFIXQ14938 502 aa17.35■□□□□ 0.37
CCDC130-211ENST00000589669 KCNA3P22001 575 aa17.34■□□□□ 0.37
CCDC130-211ENST00000589669 C10orf71Q711Q0 1435 aa17.34■□□□□ 0.37
CCDC130-211ENST00000589669 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
CCDC130-211ENST00000589669 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
CCDC130-211ENST00000589669 VIRMAQ69YN4 1812 aaKnown RBP17.33■□□□□ 0.37
CCDC130-211ENST00000589669 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.37
CCDC130-211ENST00000589669 ST18O60284 1047 aa17.33■□□□□ 0.36
CCDC130-211ENST00000589669 DPEP1P16444 411 aa17.33■□□□□ 0.36
CCDC130-211ENST00000589669 RIPK4P57078 832 aa17.33■□□□□ 0.36
CCDC130-211ENST00000589669 NPM2Q86SE8 214 aaKnown RBP17.33■□□□□ 0.36
CCDC130-211ENST00000589669 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
CCDC130-211ENST00000589669 GPR37O15354 613 aa17.32■□□□□ 0.36
CCDC130-211ENST00000589669 TMPOP42166 694 aaKnown RBP17.32■□□□□ 0.36
CCDC130-211ENST00000589669 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
CCDC130-211ENST00000589669 TBC1D2BQ9UPU7 963 aa17.32■□□□□ 0.36
CCDC130-211ENST00000589669 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
CCDC130-211ENST00000589669 SERPINB2P05120 415 aa17.31■□□□□ 0.36
CCDC130-211ENST00000589669 ZDHHC16Q969W1 377 aa17.31■□□□□ 0.36
CCDC130-211ENST00000589669 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
CCDC130-211ENST00000589669 MAP3K7O43318 606 aa17.3■□□□□ 0.36
CCDC130-211ENST00000589669 GIGYF1O75420 1035 aaPredicted RBP17.3■□□□□ 0.36
CCDC130-211ENST00000589669 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
CCDC130-211ENST00000589669 THUMPD2Q9BTF0 503 aaKnown RBP17.3■□□□□ 0.36
CCDC130-211ENST00000589669 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
CCDC130-211ENST00000589669 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
CCDC130-211ENST00000589669 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
CCDC130-211ENST00000589669 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
CCDC130-211ENST00000589669 NBPF26B4DH59 902 aa17.29■□□□□ 0.36
CCDC130-211ENST00000589669 CAMTA2O94983 1202 aa17.29■□□□□ 0.36
CCDC130-211ENST00000589669 LMOD3Q0VAK6 560 aa17.29■□□□□ 0.36
CCDC130-211ENST00000589669 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCDC130-211ENST00000589669 NBPF10Q6P3W6 841 aaKnown RBP17.29■□□□□ 0.36
CCDC130-211ENST00000589669 CLEC4GQ6UXB4 293 aa17.29■□□□□ 0.36
CCDC130-211ENST00000589669 NBPF15Q8N660 670 aa17.29■□□□□ 0.36
CCDC130-211ENST00000589669 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
CCDC130-211ENST00000589669 BCS1LQ9Y276 419 aa17.29■□□□□ 0.36
CCDC130-211ENST00000589669 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
CCDC130-211ENST00000589669 CHD4Q14839 1912 aa17.28■□□□□ 0.36
CCDC130-211ENST00000589669 ZMYND10O75800 440 aa17.28■□□□□ 0.36
CCDC130-211ENST00000589669 TBC1D9BQ66K14 1250 aa17.28■□□□□ 0.36
CCDC130-211ENST00000589669 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
CCDC130-211ENST00000589669 CDHR5Q9HBB8 845 aa17.28■□□□□ 0.36
CCDC130-211ENST00000589669 KIF13BQ9NQT8 1826 aa17.27■□□□□ 0.36
CCDC130-211ENST00000589669 TSR1Q2NL82 804 aaKnown RBP17.27■□□□□ 0.36
CCDC130-211ENST00000589669 PIP4K2AP48426 406 aaPredicted RBP17.26■□□□□ 0.35
CCDC130-211ENST00000589669 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
CCDC130-211ENST00000589669 PPP4R3BQ5MIZ7 849 aa17.26■□□□□ 0.35
CCDC130-211ENST00000589669 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
CCDC130-211ENST00000589669 SETDB2Q96T68 719 aa17.26■□□□□ 0.35
CCDC130-211ENST00000589669 ADAM33Q9BZ11 813 aa17.26■□□□□ 0.35
CCDC130-211ENST00000589669 CHRNA5P30532 468 aa17.25■□□□□ 0.35
CCDC130-211ENST00000589669 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
CCDC130-211ENST00000589669 FAM163AQ96GL9 167 aaPredicted RBP17.25■□□□□ 0.35
CCDC130-211ENST00000589669 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
CCDC130-211ENST00000589669 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
CCDC130-211ENST00000589669 TSPYL4Q9UJ04 414 aa17.24■□□□□ 0.35
CCDC130-211ENST00000589669 PDZRN3Q9UPQ7 1066 aa17.24■□□□□ 0.35
CCDC130-211ENST00000589669 NEUROD2Q15784 382 aa17.23■□□□□ 0.35
CCDC130-211ENST00000589669 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
CCDC130-211ENST00000589669 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
CCDC130-211ENST00000589669 H0YIN7 160 aa17.22■□□□□ 0.35
CCDC130-211ENST00000589669 CHL1O00533 1208 aa17.22■□□□□ 0.35
CCDC130-211ENST00000589669 PTGDRQ13258 359 aa17.22■□□□□ 0.35
CCDC130-211ENST00000589669 PRR5LQ6MZQ0 368 aa17.22■□□□□ 0.35
CCDC130-211ENST00000589669 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
CCDC130-211ENST00000589669 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms