RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 TOP2AP11388 1531 aaKnown RBP5.33□□□□□ -1.56
ZNF540-207ENST00000589285 SASH3O75995 380 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 MX2P20592 715 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
ZNF540-207ENST00000589285 ECM1Q16610 540 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 POTEAQ6S8J7 498 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 HFE2Q6ZVN8 426 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 IRF7Q92985 503 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 CRISPLD1Q9H336 500 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 CFTRP13569 1480 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 EIF1AXP47813 144 aaKnown RBP5.32□□□□□ -1.56
ZNF540-207ENST00000589285 RTN1Q16799 776 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 BHMTQ93088 406 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 CHMP3Q9Y3E7 222 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 ADAMTS2O95450 1211 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 NDFIP2Q9NV92 336 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 ZFATQ9P243 1243 aa5.32□□□□□ -1.56
ZNF540-207ENST00000589285 LOC105371045A0A1W2PR82 267 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 MICAL2O94851 1124 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 FGFR3P22607 806 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 ZAP70P43403 619 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 C8orf86Q6ZUL3 223 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 NUDT16Q96DE0 195 aaKnown RBP5.31□□□□□ -1.56
ZNF540-207ENST00000589285 NEUROD4Q9HD90 331 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 RTCBQ9Y3I0 505 aaKnown RBP5.31□□□□□ -1.56
ZNF540-207ENST00000589285 IGF1RP08069 1367 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 CCDC88BA6NC98 1476 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 FOXO3O43524 673 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 C8orf34Q49A92 452 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 NESP48681 1621 aa5.31□□□□□ -1.56
ZNF540-207ENST00000589285 ACPPP15309 386 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 TRIM26Q12899 539 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-207ENST00000589285 WDR44Q5JSH3 913 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 PCDHGC4Q9Y5F7 938 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 CYP2E1P05181 493 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-207ENST00000589285 PDIA4P13667 645 aaKnown RBP5.3□□□□□ -1.56
ZNF540-207ENST00000589285 INPP5BP32019 993 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 PLAURQ03405 335 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 NSUN5Q96P11 429 aaKnown RBP5.3□□□□□ -1.56
ZNF540-207ENST00000589285 GGNBP2Q9H3C7 697 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 ZDHHC3Q9NYG2 299 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 EFSO43281 561 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 BMP4P12644 408 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 NFKB1P19838 968 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 HIRAP54198 1017 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-207ENST00000589285 LYPD4Q6UWN0 246 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 ADAMTSL4Q6UY14 1074 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 SLC16A10Q8TF71 515 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 STIM2Q9P246 746 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 KANSL3Q9P2N6 904 aa5.3□□□□□ -1.56
ZNF540-207ENST00000589285 BIN2Q9UBW5 565 aaPredicted RBP5.3□□□□□ -1.56
ZNF540-207ENST00000589285 TGFBR3LH3BV60 316 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 SPEM2Q0P670 501 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 ACDQ96AP0 544 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 SETDB2Q96T68 719 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 GGA1Q9UJY5 639 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 KCNMB2Q9Y691 235 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 SHISA8B8ZZ34 492 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 J3QW42 95 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 ARHGAP4P98171 946 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 FCHSD1Q86WN1 690 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 CADPSQ9ULU8 1353 aa5.29□□□□□ -1.56
ZNF540-207ENST00000589285 H7C1W4 665 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 C11orf91Q3C1V1 193 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 SYT9Q86SS6 491 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 TXNDC2Q86VQ3 553 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 NANOS1Q8WY41 292 aaKnown RBP5.28□□□□□ -1.56
ZNF540-207ENST00000589285 EDEM1Q92611 657 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 NAGPAQ9UK23 515 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 POLIQ9UNA4 740 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 USTQ9Y2C2 406 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 CDC25BP30305 580 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 GLYCTKQ8IVS8 523 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 SVOPQ8N4V2 548 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 HELQQ8TDG4 1101 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 NUDT8Q8WV74 236 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 RNF19AQ9NV58 838 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 PRR12Q9ULL5 1215 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 VSIG8P0DPA2 414 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 SNRPNP63162 240 aaKnown RBP5.28□□□□□ -1.56
ZNF540-207ENST00000589285 MARK1Q9P0L2 795 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 TMEM63CQ9P1W3 806 aa5.28□□□□□ -1.56
ZNF540-207ENST00000589285 TTBK1Q5TCY1 1321 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-207ENST00000589285 XYLBO75191 536 aa5.27□□□□□ -1.57
ZNF540-207ENST00000589285 TRERF1Q96PN7 1200 aa5.27□□□□□ -1.57
ZNF540-207ENST00000589285 HHIPQ96QV1 700 aa5.27□□□□□ -1.57
ZNF540-207ENST00000589285 TAGLNQ01995 201 aaKnown RBP5.27□□□□□ -1.57
ZNF540-207ENST00000589285 FOXD3Q9UJU5 478 aaPredicted RBP5.27□□□□□ -1.57
ZNF540-207ENST00000589285 FZD6O60353 706 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 POLR3DP05423 398 aaPredicted RBP5.26□□□□□ -1.57
ZNF540-207ENST00000589285 NOM1Q5C9Z4 860 aaKnown RBP5.26□□□□□ -1.57
ZNF540-207ENST00000589285 GALNT6Q8NCL4 622 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 MYO19Q96H55 970 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 GZF1Q9H116 711 aaPredicted RBP5.26□□□□□ -1.57
ZNF540-207ENST00000589285 ORC1Q13415 861 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 COL13A1Q5TAT6 717 aaPredicted RBP5.26□□□□□ -1.57
ZNF540-207ENST00000589285 USPL1Q5W0Q7 1092 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 ATXN7L1Q9ULK2 861 aaPredicted RBP5.26□□□□□ -1.57
ZNF540-207ENST00000589285 MMP20O60882 483 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 BRD2P25440 801 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms