RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 CEBPZQ03701 1054 aaKnown RBP14.46□□□□□ -0.1
AP3D1-206ENST00000589223 DBNDD2Q9BQY9 259 aa14.46□□□□□ -0.1
AP3D1-206ENST00000589223 PHKG2P15735 406 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 SYTL4Q96C24 671 aaPredicted RBP14.45□□□□□ -0.1
AP3D1-206ENST00000589223 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 C1orf167Q5SNV9 1468 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 SLC52A2Q9HAB3 445 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
AP3D1-206ENST00000589223 NEURL1BA8MQ27 555 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 AMOTQ4VCS5 1084 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 ANKRD13DQ6ZTN6 518 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 PRDM11Q9NQV5 511 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 TFIP11Q9UBB9 837 aaKnown RBP14.45□□□□□ -0.1
AP3D1-206ENST00000589223 TCHHQ07283 1943 aa14.45□□□□□ -0.1
AP3D1-206ENST00000589223 DNM1Q05193 864 aaKnown RBP14.44□□□□□ -0.1
AP3D1-206ENST00000589223 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
AP3D1-206ENST00000589223 RAD50Q92878 1312 aa14.44□□□□□ -0.1
AP3D1-206ENST00000589223 DDX21Q9NR30 783 aaKnown RBP eCLIP14.44□□□□□ -0.1
AP3D1-206ENST00000589223 UTRNP46939 3433 aa14.44□□□□□ -0.1
AP3D1-206ENST00000589223 RAB11FIP3O75154 756 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 C17orf53Q8N3J3 647 aaPredicted RBP14.43□□□□□ -0.1
AP3D1-206ENST00000589223 PRDM10Q9NQV6 1147 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 FAM208AQ9UK61 1670 aaKnown RBP14.43□□□□□ -0.1
AP3D1-206ENST00000589223 A0A087WWV3 80 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 GLRX3O76003 335 aaKnown RBP14.43□□□□□ -0.1
AP3D1-206ENST00000589223 SYT1P21579 422 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 GJB2P29033 226 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 NEXNQ0ZGT2 675 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 GCKRQ14397 625 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 CAMK4Q16566 473 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 ME3Q16798 604 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 LINS1Q8NG48 757 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 FBXW7Q969H0 707 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 PDRG1Q9NUG6 133 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 DBNLQ9UJU6 430 aaKnown RBP14.43□□□□□ -0.1
AP3D1-206ENST00000589223 ZHX1Q9UKY1 873 aaPredicted RBP14.43□□□□□ -0.1
AP3D1-206ENST00000589223 SMC3Q9UQE7 1217 aa14.43□□□□□ -0.1
AP3D1-206ENST00000589223 MEGF6O75095 1541 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 BRD1O95696 1058 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 GPTP24298 496 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 PUS3Q9BZE2 481 aaKnown RBP14.42□□□□□ -0.1
AP3D1-206ENST00000589223 PDCL3Q9H2J4 239 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 ZNF335Q9H4Z2 1342 aaPredicted RBP14.42□□□□□ -0.1
AP3D1-206ENST00000589223 ST3GAL1Q11201 340 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 SKOR2Q2VWA4 1001 aaPredicted RBP14.42□□□□□ -0.1
AP3D1-206ENST00000589223 LRRC24Q50LG9 513 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 VPS53Q5VIR6 699 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 GIMAP6Q6P9H5 292 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 PI16Q6UXB8 463 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 STK11IPQ8N1F8 1099 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 TPCN1Q9ULQ1 816 aa14.42□□□□□ -0.1
AP3D1-206ENST00000589223 KDM6AO15550 1401 aaPredicted RBP14.41□□□□□ -0.1
AP3D1-206ENST00000589223 NBPF26B4DH59 902 aa14.41□□□□□ -0.1
AP3D1-206ENST00000589223 JAK2O60674 1132 aa14.41□□□□□ -0.1
AP3D1-206ENST00000589223 DDX58O95786 925 aaKnown RBP14.41□□□□□ -0.1
AP3D1-206ENST00000589223 NBPF14Q5TI25 921 aa14.41□□□□□ -0.1
AP3D1-206ENST00000589223 NBPF10Q6P3W6 841 aaKnown RBP14.41□□□□□ -0.1
AP3D1-206ENST00000589223 NBPF15Q8N660 670 aa14.41□□□□□ -0.1
AP3D1-206ENST00000589223 HYPKQ9NX55 129 aa14.41□□□□□ -0.1
AP3D1-206ENST00000589223 GUCY1B3Q02153 619 aa14.4□□□□□ -0.1
AP3D1-206ENST00000589223 CWC22Q9HCG8 908 aaKnown RBP14.4□□□□□ -0.1
AP3D1-206ENST00000589223 SNAP23O00161 211 aa14.4□□□□□ -0.1
AP3D1-206ENST00000589223 GOLIM4O00461 696 aa14.4□□□□□ -0.1
AP3D1-206ENST00000589223 CREB3L3Q68CJ9 461 aa14.4□□□□□ -0.1
AP3D1-206ENST00000589223 IFNL2Q8IZJ0 200 aa14.4□□□□□ -0.1
AP3D1-206ENST00000589223 HCLS1P14317 486 aaPredicted RBP14.39□□□□□ -0.11
AP3D1-206ENST00000589223 MSNP26038 577 aaKnown RBP14.39□□□□□ -0.11
AP3D1-206ENST00000589223 HAND2P61296 217 aa14.39□□□□□ -0.11
AP3D1-206ENST00000589223 LARP1Q6PKG0 1096 aaKnown RBP14.39□□□□□ -0.11
AP3D1-206ENST00000589223 CDC37L1Q7L3B6 337 aa14.39□□□□□ -0.11
AP3D1-206ENST00000589223 GPHNQ9NQX3 736 aaPredicted RBP14.39□□□□□ -0.11
AP3D1-206ENST00000589223 RPAP1Q9BWH6 1393 aaPredicted RBP14.39□□□□□ -0.11
AP3D1-206ENST00000589223 ADAMTSL3P82987 1691 aa14.39□□□□□ -0.11
AP3D1-206ENST00000589223 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.114e-15■■■□□ 17.4
AP3D1-206ENST00000589223 STX6O43752 255 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
AP3D1-206ENST00000589223 FAM89AQ96GI7 184 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 USP25Q9UHP3 1055 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 LIMCH1Q9UPQ0 1083 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
AP3D1-206ENST00000589223 FGD1P98174 961 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 FKBP4Q02790 459 aaKnown RBP eCLIP14.38□□□□□ -0.11
AP3D1-206ENST00000589223 CUL4AQ13619 759 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 SMIM5Q71RC9 77 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 ERCC4Q92889 916 aaPredicted RBP14.38□□□□□ -0.11
AP3D1-206ENST00000589223 TTC14Q96N46 770 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 CCDC171Q6TFL3 1326 aa14.38□□□□□ -0.11
AP3D1-206ENST00000589223 PTPN12Q05209 780 aaKnown RBP14.37□□□□□ -0.11
AP3D1-206ENST00000589223 TTLL5Q6EMB2 1281 aa14.37□□□□□ -0.11
AP3D1-206ENST00000589223 BRINP3Q76B58 766 aa14.37□□□□□ -0.11
AP3D1-206ENST00000589223 MED1Q15648 1581 aaPredicted RBP14.37□□□□□ -0.11
AP3D1-206ENST00000589223 SLC27A2O14975 620 aa14.37□□□□□ -0.11
AP3D1-206ENST00000589223 PTMAP06454 111 aaKnown RBP14.37□□□□□ -0.11
AP3D1-206ENST00000589223 CYP46A1Q9Y6A2 500 aa14.37□□□□□ -0.11
AP3D1-206ENST00000589223 SNRPA1P09661 255 aaKnown RBP14.37□□□□□ -0.11
AP3D1-206ENST00000589223 CKAP2LQ8IYA6 745 aa14.37□□□□□ -0.11
AP3D1-206ENST00000589223 GPATCH3Q96I76 525 aa14.37□□□□□ -0.11
AP3D1-206ENST00000589223 METTL22Q9BUU2 404 aaPredicted RBP14.37□□□□□ -0.11
AP3D1-206ENST00000589223 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
AP3D1-206ENST00000589223 COL15A1P39059 1388 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms