RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
CLPTM1-210ENST00000589158 C9orf131Q5VYM1 1079 aa18.11■□□□□ 0.49
CLPTM1-210ENST00000589158 RPGRQ92834 1020 aaKnown RBP18.11■□□□□ 0.49
CLPTM1-210ENST00000589158 ISCA1Q9BUE6 129 aa18.11■□□□□ 0.49
CLPTM1-210ENST00000589158 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
CLPTM1-210ENST00000589158 NUP98P52948 1817 aa18.11■□□□□ 0.49
CLPTM1-210ENST00000589158 BRCA1P38398 1863 aaKnown RBP18.11■□□□□ 0.49
CLPTM1-210ENST00000589158 RNF123Q5XPI4 1314 aa18.1■□□□□ 0.49
CLPTM1-210ENST00000589158 VAMP4O75379 141 aa18.1■□□□□ 0.49
CLPTM1-210ENST00000589158 ALDH1B1P30837 517 aa18.1■□□□□ 0.49
CLPTM1-210ENST00000589158 RASSF7Q02833 373 aa18.1■□□□□ 0.49
CLPTM1-210ENST00000589158 NLRP3Q96P20 1036 aa18.1■□□□□ 0.49
CLPTM1-210ENST00000589158 MYD88Q99836 296 aa18.1■□□□□ 0.49
CLPTM1-210ENST00000589158 CHD4Q14839 1912 aa18.1■□□□□ 0.49
CLPTM1-210ENST00000589158 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
CLPTM1-210ENST00000589158 CRY2Q49AN0 593 aa18.09■□□□□ 0.49
CLPTM1-210ENST00000589158 SLC10A5Q5PT55 438 aa18.09■□□□□ 0.49
CLPTM1-210ENST00000589158 SYNE4Q8N205 404 aa18.09■□□□□ 0.49
CLPTM1-210ENST00000589158 ZNF526Q8TF50 670 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-210ENST00000589158 RNF181Q9P0P0 153 aa18.09■□□□□ 0.49
CLPTM1-210ENST00000589158 COL11A2P13942 1736 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-210ENST00000589158 HCLS1P14317 486 aaPredicted RBP18.08■□□□□ 0.48
CLPTM1-210ENST00000589158 C3orf67Q6ZVT6 689 aa18.08■□□□□ 0.48
CLPTM1-210ENST00000589158 G2E3Q7L622 706 aa18.08■□□□□ 0.48
CLPTM1-210ENST00000589158 RBM17Q96I25 401 aaKnown RBP18.08■□□□□ 0.48
CLPTM1-210ENST00000589158 MAP3K2Q9Y2U5 619 aa18.08■□□□□ 0.48
CLPTM1-210ENST00000589158 DLEC1Q9Y238 1755 aa18.08■□□□□ 0.48
CLPTM1-210ENST00000589158 RIC1Q4ADV7 1423 aa18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 ADCY9O60503 1353 aa18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 TRIM28Q13263 835 aaKnown RBP18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 RTL5Q5HYW3 569 aaPredicted RBP18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 SOGA3Q5TF21 947 aa18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 KSR2Q6VAB6 950 aa18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 FAM89AQ96GI7 184 aa18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
CLPTM1-210ENST00000589158 PI4KAP2A4QPH2 592 aa18.06■□□□□ 0.48
CLPTM1-210ENST00000589158 E9PSI1 815 aa18.06■□□□□ 0.48
CLPTM1-210ENST00000589158 NFKBIEO00221 500 aa18.06■□□□□ 0.48
CLPTM1-210ENST00000589158 LMNB1P20700 586 aa18.06■□□□□ 0.48
CLPTM1-210ENST00000589158 HOXA10P31260 410 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-210ENST00000589158 PI4KAP1Q8N8J0 262 aa18.06■□□□□ 0.48
CLPTM1-210ENST00000589158 ARFGEF1Q9Y6D6 1849 aa18.06■□□□□ 0.48
CLPTM1-210ENST00000589158 FLIIQ13045 1269 aa18.05■□□□□ 0.48
CLPTM1-210ENST00000589158 CCDC93Q567U6 631 aa18.05■□□□□ 0.48
CLPTM1-210ENST00000589158 C7orf43Q8WVR3 580 aa18.05■□□□□ 0.48
CLPTM1-210ENST00000589158 GPBP1L1Q9HC44 474 aaPredicted RBP18.05■□□□□ 0.48
CLPTM1-210ENST00000589158 TNRC6CQ9HCJ0 1690 aaKnown RBP18.05■□□□□ 0.48
CLPTM1-210ENST00000589158 NEXNQ0ZGT2 675 aa18.04■□□□□ 0.48
CLPTM1-210ENST00000589158 FKBP5Q13451 457 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-210ENST00000589158 OLFM4Q6UX06 510 aa18.04■□□□□ 0.48
CLPTM1-210ENST00000589158 CCDC191Q8NCU4 936 aa18.04■□□□□ 0.48
CLPTM1-210ENST00000589158 CRAMP1Q96RY5 1269 aa18.04■□□□□ 0.48
CLPTM1-210ENST00000589158 TAOK3Q9H2K8 898 aa18.04■□□□□ 0.48
CLPTM1-210ENST00000589158 CWC25Q9NXE8 425 aaPredicted RBP18.04■□□□□ 0.48
CLPTM1-210ENST00000589158 PRELPP51888 382 aa18.03■□□□□ 0.48
CLPTM1-210ENST00000589158 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
CLPTM1-210ENST00000589158 IRS4O14654 1257 aaPredicted RBP18.02■□□□□ 0.48
CLPTM1-210ENST00000589158 PPEF1O14829 653 aaPredicted RBP18.02■□□□□ 0.48
CLPTM1-210ENST00000589158 DDX46Q7L014 1031 aaKnown RBP18.02■□□□□ 0.48
CLPTM1-210ENST00000589158 ZBTB38Q8NAP3 1195 aaPredicted RBP18.02■□□□□ 0.48
CLPTM1-210ENST00000589158 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
CLPTM1-210ENST00000589158 ANKRD36CQ5JPF3 1778 aa18.02■□□□□ 0.47
CLPTM1-210ENST00000589158 RTKN2Q8IZC4 609 aa18.01■□□□□ 0.47
CLPTM1-210ENST00000589158 JARID2Q92833 1246 aaPredicted RBP18.01■□□□□ 0.47
CLPTM1-210ENST00000589158 TMX4Q9H1E5 349 aaPredicted RBP18.01■□□□□ 0.47
CLPTM1-210ENST00000589158 LTBP3Q9NS15 1303 aa18■□□□□ 0.47
CLPTM1-210ENST00000589158 SLX4Q8IY92 1834 aa18■□□□□ 0.47
CLPTM1-210ENST00000589158 PCCAP05165 728 aaPredicted RBP18■□□□□ 0.47
CLPTM1-210ENST00000589158 IGKV5-2P06315 115 aa18■□□□□ 0.47
CLPTM1-210ENST00000589158 HSP90B1P14625 803 aaKnown RBP18■□□□□ 0.47
CLPTM1-210ENST00000589158 ABCC4O15439 1325 aa17.99■□□□□ 0.47
CLPTM1-210ENST00000589158 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
CLPTM1-210ENST00000589158 FKBP4Q02790 459 aaKnown RBP eCLIP17.99■□□□□ 0.47
CLPTM1-210ENST00000589158 CWF19L2Q2TBE0 894 aaKnown RBP17.99■□□□□ 0.47
CLPTM1-210ENST00000589158 CC2D2BQ6DHV5 1058 aa17.99■□□□□ 0.47
CLPTM1-210ENST00000589158 DNAAF4Q8WXU2 420 aa17.99■□□□□ 0.47
CLPTM1-210ENST00000589158 BBOX1O75936 387 aa17.98■□□□□ 0.47
CLPTM1-210ENST00000589158 SF3B3Q15393 1217 aaKnown RBP17.98■□□□□ 0.47
CLPTM1-210ENST00000589158 ZNF277Q9NRM2 450 aaPredicted RBP17.98■□□□□ 0.47
CLPTM1-210ENST00000589158 NEURL1BA8MQ27 555 aa17.97■□□□□ 0.47
CLPTM1-210ENST00000589158 GRAPQ13588 217 aa17.97■□□□□ 0.47
CLPTM1-210ENST00000589158 GRAPLQ8TC17 118 aaPredicted RBP17.97■□□□□ 0.47
CLPTM1-210ENST00000589158 ATP6V0A2Q9Y487 856 aa17.97■□□□□ 0.47
CLPTM1-210ENST00000589158 KDM2BQ8NHM5 1336 aa17.97■□□□□ 0.47
CLPTM1-210ENST00000589158 ZC3H4Q9UPT8 1303 aaKnown RBP17.97■□□□□ 0.47
CLPTM1-210ENST00000589158 F6X3S4 739 aa17.96■□□□□ 0.47
CLPTM1-210ENST00000589158 GRIPAP1Q4V328 841 aa17.96■□□□□ 0.47
CLPTM1-210ENST00000589158 SLC51AQ86UW1 340 aa17.96■□□□□ 0.47
CLPTM1-210ENST00000589158 PDE8AO60658 829 aa17.95■□□□□ 0.46
CLPTM1-210ENST00000589158 HNRNPUQ00839 825 aaKnown RBP eCLIP17.95■□□□□ 0.46
CLPTM1-210ENST00000589158 TRMT2AQ8IZ69 625 aaKnown RBP17.95■□□□□ 0.46
CLPTM1-210ENST00000589158 LINS1Q8NG48 757 aa17.95■□□□□ 0.46
CLPTM1-210ENST00000589158 PSMD1Q99460 953 aa17.95■□□□□ 0.46
CLPTM1-210ENST00000589158 NMRK2Q9NPI5 230 aa17.95■□□□□ 0.46
CLPTM1-210ENST00000589158 GCKRQ14397 625 aa17.94■□□□□ 0.46
CLPTM1-210ENST00000589158 DPY19L2Q6NUT2 758 aa17.94■□□□□ 0.46
CLPTM1-210ENST00000589158 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
CLPTM1-210ENST00000589158 SP8Q8IXZ3 490 aa17.94■□□□□ 0.46
CLPTM1-210ENST00000589158 MRPL50Q8N5N7 158 aaKnown RBP17.94■□□□□ 0.46
CLPTM1-210ENST00000589158 CCDC85AQ96PX6 553 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms