RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 GPTP24298 496 aa20.19■□□□□ 0.82
SF3A2-204ENST00000589118 JDP2Q8WYK2 163 aa20.19■□□□□ 0.82
SF3A2-204ENST00000589118 RTF1Q92541 710 aaKnown RBP20.19■□□□□ 0.82
SF3A2-204ENST00000589118 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
SF3A2-204ENST00000589118 SCNN1DP51172 638 aa20.18■□□□□ 0.82
SF3A2-204ENST00000589118 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
SF3A2-204ENST00000589118 CST9Q5W186 159 aa20.18■□□□□ 0.82
SF3A2-204ENST00000589118 TTLL7Q6ZT98 887 aa20.18■□□□□ 0.82
SF3A2-204ENST00000589118 C3orf67Q6ZVT6 689 aa20.18■□□□□ 0.82
SF3A2-204ENST00000589118 EIF6P56537 245 aaKnown RBP20.17■□□□□ 0.82
SF3A2-204ENST00000589118 CAPNS2Q96L46 248 aa20.17■□□□□ 0.82
SF3A2-204ENST00000589118 PSMD1Q99460 953 aa20.17■□□□□ 0.82
SF3A2-204ENST00000589118 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
SF3A2-204ENST00000589118 TRPM7Q96QT4 1865 aa20.17■□□□□ 0.82
SF3A2-204ENST00000589118 CCDC85CA6NKD9 419 aa20.16■□□□□ 0.82
SF3A2-204ENST00000589118 AOC2O75106 756 aa20.16■□□□□ 0.82
SF3A2-204ENST00000589118 MAP2K1Q02750 393 aaPredicted RBP20.16■□□□□ 0.82
SF3A2-204ENST00000589118 CRY2Q49AN0 593 aa20.16■□□□□ 0.82
SF3A2-204ENST00000589118 LARGE2Q8N3Y3 721 aa20.16■□□□□ 0.82
SF3A2-204ENST00000589118 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
SF3A2-204ENST00000589118 SUSD4Q5VX71 490 aa20.15■□□□□ 0.82
SF3A2-204ENST00000589118 ZBTB3Q9H5J0 574 aa20.15■□□□□ 0.82
SF3A2-204ENST00000589118 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
SF3A2-204ENST00000589118 NPC1L1Q9UHC9 1359 aa20.14■□□□□ 0.81
SF3A2-204ENST00000589118 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
SF3A2-204ENST00000589118 MYL6BP14649 208 aa20.14■□□□□ 0.81
SF3A2-204ENST00000589118 LMOD1P29536 600 aaPredicted RBP20.14■□□□□ 0.81
SF3A2-204ENST00000589118 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
SF3A2-204ENST00000589118 RPGRQ92834 1020 aaKnown RBP20.14■□□□□ 0.81
SF3A2-204ENST00000589118 CFAP53Q96M91 514 aa20.14■□□□□ 0.81
SF3A2-204ENST00000589118 GPR101Q96P66 508 aaPredicted RBP20.14■□□□□ 0.81
SF3A2-204ENST00000589118 THSD7BQ9C0I4 1608 aa20.13■□□□□ 0.81
SF3A2-204ENST00000589118 MAP3K15Q6ZN16 1313 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
SF3A2-204ENST00000589118 SLC34A2O95436 690 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 HOXA10P31260 410 aaPredicted RBP20.11■□□□□ 0.81
SF3A2-204ENST00000589118 AOC3Q16853 763 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 THUMPD2Q9BTF0 503 aaKnown RBP20.11■□□□□ 0.81
SF3A2-204ENST00000589118 NYXQ9GZU5 481 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 CASP8AP2Q9UKL3 1982 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
SF3A2-204ENST00000589118 RGL2O15211 777 aa20.09■□□□□ 0.81
SF3A2-204ENST00000589118 PPIP5K2O43314 1243 aa20.09■□□□□ 0.81
SF3A2-204ENST00000589118 DLK2Q6UY11 383 aa20.09■□□□□ 0.81
SF3A2-204ENST00000589118 RBM17Q96I25 401 aaKnown RBP20.09■□□□□ 0.81
SF3A2-204ENST00000589118 TLL2Q9Y6L7 1015 aa20.09■□□□□ 0.81
SF3A2-204ENST00000589118 TAF1P21675 1872 aa20.09■□□□□ 0.81
SF3A2-204ENST00000589118 ERVV-1B6SEH8 477 aa20.08■□□□□ 0.81
SF3A2-204ENST00000589118 CC2D2BQ6DHV5 1058 aa20.08■□□□□ 0.81
SF3A2-204ENST00000589118 USP50Q70EL3 339 aaPredicted RBP20.08■□□□□ 0.81
SF3A2-204ENST00000589118 NIM1KQ8IY84 436 aa20.08■□□□□ 0.81
SF3A2-204ENST00000589118 ZNF428Q96B54 188 aa20.08■□□□□ 0.81
SF3A2-204ENST00000589118 BEGAINQ9BUH8 593 aa20.08■□□□□ 0.81
SF3A2-204ENST00000589118 GLIS2Q9BZE0 524 aaPredicted RBP20.08■□□□□ 0.81
SF3A2-204ENST00000589118 SHTN1A0MZ66 631 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 NTSR2O95665 410 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 ECE1P42892 770 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 EIF4A1P60842 406 aaKnown RBP20.07■□□□□ 0.8
SF3A2-204ENST00000589118 CXCL9Q07325 125 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 ZNF34Q8IZ26 560 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 CFAP44Q96MT7 982 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 CRAMP1Q96RY5 1269 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 GPRC5DQ9NZD1 345 aa20.07■□□□□ 0.8
SF3A2-204ENST00000589118 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
SF3A2-204ENST00000589118 CELF2O95319 508 aaKnown RBP20.06■□□□□ 0.8
SF3A2-204ENST00000589118 MLLT1Q03111 559 aaPredicted RBP20.06■□□□□ 0.8
SF3A2-204ENST00000589118 ZIC5Q96T25 663 aa20.06■□□□□ 0.8
SF3A2-204ENST00000589118 ZNF408Q9H9D4 720 aa20.06■□□□□ 0.8
SF3A2-204ENST00000589118 LAMB2P55268 1798 aa20.06■□□□□ 0.8
SF3A2-204ENST00000589118 RIC1Q4ADV7 1423 aa20.05■□□□□ 0.8
SF3A2-204ENST00000589118 ANXA1P04083 346 aa20.05■□□□□ 0.8
SF3A2-204ENST00000589118 GMPSP49915 693 aaPredicted RBP20.05■□□□□ 0.8
SF3A2-204ENST00000589118 HIRAP54198 1017 aaPredicted RBP20.05■□□□□ 0.8
SF3A2-204ENST00000589118 SAPCD2Q86UD0 394 aa20.04■□□□□ 0.8
SF3A2-204ENST00000589118 ADARB2Q9NS39 739 aaKnown RBP20.04■□□□□ 0.8
SF3A2-204ENST00000589118 RAD17O75943 681 aa20.03■□□□□ 0.8
SF3A2-204ENST00000589118 MCOLN1Q9GZU1 580 aa20.03■□□□□ 0.8
SF3A2-204ENST00000589118 GIGYF2Q6Y7W6 1299 aaKnown RBP20.02■□□□□ 0.8
SF3A2-204ENST00000589118 ZNRF3Q9ULT6 936 aa20.02■□□□□ 0.8
SF3A2-204ENST00000589118 ATP6V0A2Q9Y487 856 aa20.02■□□□□ 0.8
SF3A2-204ENST00000589118 ABCC4O15439 1325 aa20.02■□□□□ 0.79
SF3A2-204ENST00000589118 MAP2K2P36507 400 aa20.01■□□□□ 0.79
SF3A2-204ENST00000589118 RGS19P49795 217 aa20.01■□□□□ 0.79
SF3A2-204ENST00000589118 PROSER3Q2NL68 480 aa20.01■□□□□ 0.79
SF3A2-204ENST00000589118 CIAPIN1Q6FI81 312 aa20.01■□□□□ 0.79
SF3A2-204ENST00000589118 TRPM4Q8TD43 1214 aa20.01■□□□□ 0.79
SF3A2-204ENST00000589118 NLRP3Q96P20 1036 aa20.01■□□□□ 0.79
SF3A2-204ENST00000589118 HCLS1P14317 486 aaPredicted RBP20■□□□□ 0.79
SF3A2-204ENST00000589118 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
SF3A2-204ENST00000589118 POLR2AP24928 1970 aaKnown RBP19.99■□□□□ 0.79
SF3A2-204ENST00000589118 IBTKQ9P2D0 1353 aaPredicted RBP19.99■□□□□ 0.79
SF3A2-204ENST00000589118 PDIA6Q15084 440 aa19.99■□□□□ 0.79
SF3A2-204ENST00000589118 PPP1R42Q7Z4L9 355 aa19.99■□□□□ 0.79
SF3A2-204ENST00000589118 NECTIN2Q92692 538 aa19.99■□□□□ 0.79
SF3A2-204ENST00000589118 BCL2L13Q9BXK5 485 aa19.99■□□□□ 0.79
SF3A2-204ENST00000589118 YDJCA8MPS7 323 aa19.98■□□□□ 0.79
SF3A2-204ENST00000589118 DGKZQ13574 1117 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms