RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-208ENST00000588692 TAOK3Q9H2K8 898 aa18.72■□□□□ 0.59
DDX39A-208ENST00000588692 PRELPP51888 382 aa18.71■□□□□ 0.59
DDX39A-208ENST00000588692 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
DDX39A-208ENST00000588692 TCIRG1Q13488 830 aa18.71■□□□□ 0.59
DDX39A-208ENST00000588692 PLBD2Q8NHP8 589 aa18.71■□□□□ 0.59
DDX39A-208ENST00000588692 C7orf43Q8WVR3 580 aa18.71■□□□□ 0.59
DDX39A-208ENST00000588692 UTP14AQ9BVJ6 771 aaKnown RBP18.71■□□□□ 0.59
DDX39A-208ENST00000588692 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-208ENST00000588692 NLRP10Q86W26 655 aa18.7■□□□□ 0.58
DDX39A-208ENST00000588692 WWC1Q8IX03 1113 aa18.7■□□□□ 0.58
DDX39A-208ENST00000588692 RPGRQ92834 1020 aaKnown RBP18.7■□□□□ 0.58
DDX39A-208ENST00000588692 NMRK2Q9NPI5 230 aa18.7■□□□□ 0.58
DDX39A-208ENST00000588692 IL16Q14005 1332 aa18.69■□□□□ 0.58
DDX39A-208ENST00000588692 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
DDX39A-208ENST00000588692 ANKRD13DQ6ZTN6 518 aa18.69■□□□□ 0.58
DDX39A-208ENST00000588692 SLC10A5Q5PT55 438 aa18.68■□□□□ 0.58
DDX39A-208ENST00000588692 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
DDX39A-208ENST00000588692 LAMB2P55268 1798 aa18.68■□□□□ 0.58
DDX39A-208ENST00000588692 TOMM70O94826 608 aa18.67■□□□□ 0.58
DDX39A-208ENST00000588692 RTKN2Q8IZC4 609 aa18.67■□□□□ 0.58
DDX39A-208ENST00000588692 C8orf58Q8NAV2 365 aa18.67■□□□□ 0.58
DDX39A-208ENST00000588692 GLTPD2A6NH11 291 aa18.66■□□□□ 0.58
DDX39A-208ENST00000588692 ELL2O00472 640 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-208ENST00000588692 RBM17Q96I25 401 aaKnown RBP18.66■□□□□ 0.58
DDX39A-208ENST00000588692 CRAMP1Q96RY5 1269 aa18.66■□□□□ 0.58
DDX39A-208ENST00000588692 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
DDX39A-208ENST00000588692 FKBP4Q02790 459 aaKnown RBP eCLIP18.65■□□□□ 0.58
DDX39A-208ENST00000588692 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
DDX39A-208ENST00000588692 CCDC30Q5VVM6 783 aa18.65■□□□□ 0.58
DDX39A-208ENST00000588692 CC2D2BQ6DHV5 1058 aa18.65■□□□□ 0.58
DDX39A-208ENST00000588692 TRMT112Q9UI30 125 aaKnown RBP18.65■□□□□ 0.58
DDX39A-208ENST00000588692 GRIPAP1Q4V328 841 aa18.65■□□□□ 0.58
DDX39A-208ENST00000588692 DPY19L2Q6NUT2 758 aa18.65■□□□□ 0.58
DDX39A-208ENST00000588692 TSR2Q969E8 191 aaKnown RBP18.65■□□□□ 0.58
DDX39A-208ENST00000588692 ISCA1Q9BUE6 129 aa18.65■□□□□ 0.58
DDX39A-208ENST00000588692 SNED1Q8TER0 1413 aa18.64■□□□□ 0.57
DDX39A-208ENST00000588692 DDX60Q8IY21 1712 aaKnown RBP18.64■□□□□ 0.57
DDX39A-208ENST00000588692 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
DDX39A-208ENST00000588692 C3orf67Q6ZVT6 689 aa18.64■□□□□ 0.57
DDX39A-208ENST00000588692 C16orf71Q8IYS4 520 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-208ENST00000588692 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
DDX39A-208ENST00000588692 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
DDX39A-208ENST00000588692 RBM46Q8TBY0 533 aaKnown RBP18.63■□□□□ 0.57
DDX39A-208ENST00000588692 PSMD1Q99460 953 aa18.63■□□□□ 0.57
DDX39A-208ENST00000588692 RRAGCQ9HB90 399 aa18.63■□□□□ 0.57
DDX39A-208ENST00000588692 OLFM4Q6UX06 510 aa18.62■□□□□ 0.57
DDX39A-208ENST00000588692 RIC3Q7Z5B4 369 aa18.62■□□□□ 0.57
DDX39A-208ENST00000588692 TSPYL6Q8N831 410 aa18.62■□□□□ 0.57
DDX39A-208ENST00000588692 PHAXQ9H814 394 aaKnown RBP18.62■□□□□ 0.57
DDX39A-208ENST00000588692 PPEF1O14829 653 aaPredicted RBP18.61■□□□□ 0.57
DDX39A-208ENST00000588692 DDX58O95786 925 aaKnown RBP18.61■□□□□ 0.57
DDX39A-208ENST00000588692 HSPA6P17066 643 aa18.61■□□□□ 0.57
DDX39A-208ENST00000588692 FAM9BQ8IZU0 186 aa18.61■□□□□ 0.57
DDX39A-208ENST00000588692 STK31Q9BXU1 1019 aa18.61■□□□□ 0.57
DDX39A-208ENST00000588692 HCLS1P14317 486 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-208ENST00000588692 VEGFAP15692 232 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-208ENST00000588692 TWISTNBQ3B726 338 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-208ENST00000588692 CACNA1FO60840 1977 aa18.6■□□□□ 0.57
DDX39A-208ENST00000588692 ABCC4O15439 1325 aa18.6■□□□□ 0.57
DDX39A-208ENST00000588692 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
DDX39A-208ENST00000588692 ATP5J2-PTCD1G3V325 749 aa18.59■□□□□ 0.57
DDX39A-208ENST00000588692 TMX4Q9H1E5 349 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-208ENST00000588692 ZNF277Q9NRM2 450 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-208ENST00000588692 IARSP41252 1262 aaKnown RBP18.58■□□□□ 0.57
DDX39A-208ENST00000588692 SYNE4Q8N205 404 aa18.58■□□□□ 0.57
DDX39A-208ENST00000588692 BBOX1O75936 387 aa18.58■□□□□ 0.56
DDX39A-208ENST00000588692 HSP90B1P14625 803 aaKnown RBP18.58■□□□□ 0.56
DDX39A-208ENST00000588692 FSTL1Q12841 308 aa18.58■□□□□ 0.56
DDX39A-208ENST00000588692 DDX46Q7L014 1031 aaKnown RBP18.58■□□□□ 0.56
DDX39A-208ENST00000588692 SALL2Q9Y467 1007 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-208ENST00000588692 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
DDX39A-208ENST00000588692 FAM89AQ96GI7 184 aa18.57■□□□□ 0.56
DDX39A-208ENST00000588692 MYD88Q99836 296 aa18.57■□□□□ 0.56
DDX39A-208ENST00000588692 SCN4AP35499 1836 aa18.56■□□□□ 0.56
DDX39A-208ENST00000588692 LRRC37AA6NMS7 1700 aa18.56■□□□□ 0.56
DDX39A-208ENST00000588692 GRAPQ13588 217 aa18.56■□□□□ 0.56
DDX39A-208ENST00000588692 SF3B3Q15393 1217 aaKnown RBP18.56■□□□□ 0.56
DDX39A-208ENST00000588692 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
DDX39A-208ENST00000588692 ZBTB38Q8NAP3 1195 aaPredicted RBP18.56■□□□□ 0.56
DDX39A-208ENST00000588692 CCDC191Q8NCU4 936 aa18.56■□□□□ 0.56
DDX39A-208ENST00000588692 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
DDX39A-208ENST00000588692 METTL22Q9BUU2 404 aaPredicted RBP18.56■□□□□ 0.56
DDX39A-208ENST00000588692 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
DDX39A-208ENST00000588692 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
DDX39A-208ENST00000588692 JDP2Q8WYK2 163 aa18.55■□□□□ 0.56
DDX39A-208ENST00000588692 MYH16Q9H6N6 1097 aa18.55■□□□□ 0.56
DDX39A-208ENST00000588692 CEP350Q5VT06 3117 aa18.54■□□□□ 0.56
DDX39A-208ENST00000588692 IRS4O14654 1257 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-208ENST00000588692 DDNO94850 711 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-208ENST00000588692 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
DDX39A-208ENST00000588692 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
DDX39A-208ENST00000588692 L3MBTL3Q96JM7 780 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-208ENST00000588692 VPS33BQ9H267 617 aa18.54■□□□□ 0.56
DDX39A-208ENST00000588692 CWC25Q9NXE8 425 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-208ENST00000588692 MAP3K2Q9Y2U5 619 aa18.54■□□□□ 0.56
DDX39A-208ENST00000588692 TAF1P21675 1872 aa18.54■□□□□ 0.56
DDX39A-208ENST00000588692 POTECB2RU33 542 aa18.53■□□□□ 0.56
DDX39A-208ENST00000588692 FZD9O00144 591 aa18.53■□□□□ 0.56
DDX39A-208ENST00000588692 TCERG1O14776 1098 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms