RNA–Protein interactions for RNA: ENST00000588594.5

RAD51D-216, Transcript of RAD51 paralog D, humanhuman

TSL 2

Gene RAD51D, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-216ENST00000588594 ANKRD36CQ5JPF3 1778 aa19.53■□□□□ 0.72
RAD51D-216ENST00000588594 ELL2O00472 640 aaPredicted RBP19.52■□□□□ 0.72
RAD51D-216ENST00000588594 CCDC93Q567U6 631 aa19.52■□□□□ 0.72
RAD51D-216ENST00000588594 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
RAD51D-216ENST00000588594 FER1L6Q2WGJ9 1857 aa19.52■□□□□ 0.72
RAD51D-216ENST00000588594 SLC10A5Q5PT55 438 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 NLRP10Q86W26 655 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 C8orf58Q8NAV2 365 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 C7orf43Q8WVR3 580 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 NLRP3Q96P20 1036 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 TNRC6CQ9HCJ0 1690 aaKnown RBP19.51■□□□□ 0.71
RAD51D-216ENST00000588594 CACNA1SQ13698 1873 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 KIF3CO14782 793 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
RAD51D-216ENST00000588594 GOLGA2Q08379 1002 aa19.51■□□□□ 0.71
RAD51D-216ENST00000588594 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
RAD51D-216ENST00000588594 RTKN2Q8IZC4 609 aa19.5■□□□□ 0.71
RAD51D-216ENST00000588594 FAM9BQ8IZU0 186 aa19.5■□□□□ 0.71
RAD51D-216ENST00000588594 RBM17Q96I25 401 aaKnown RBP19.5■□□□□ 0.71
RAD51D-216ENST00000588594 TRMT112Q9UI30 125 aaKnown RBP19.5■□□□□ 0.71
RAD51D-216ENST00000588594 PRELPP51888 382 aa19.49■□□□□ 0.71
RAD51D-216ENST00000588594 CC2D2BQ6DHV5 1058 aa19.49■□□□□ 0.71
RAD51D-216ENST00000588594 TSR2Q969E8 191 aaKnown RBP19.49■□□□□ 0.71
RAD51D-216ENST00000588594 CRAMP1Q96RY5 1269 aa19.49■□□□□ 0.71
RAD51D-216ENST00000588594 SH3TC1Q8TE82 1336 aa19.48■□□□□ 0.71
RAD51D-216ENST00000588594 GRIPAP1Q4V328 841 aa19.48■□□□□ 0.71
RAD51D-216ENST00000588594 RIC3Q7Z5B4 369 aa19.48■□□□□ 0.71
RAD51D-216ENST00000588594 SENP3-EIF4A1A0A087X0R7 540 aa19.47■□□□□ 0.71
RAD51D-216ENST00000588594 DDX58O95786 925 aaKnown RBP19.47■□□□□ 0.71
RAD51D-216ENST00000588594 FKBP4Q02790 459 aaKnown RBP eCLIP19.47■□□□□ 0.71
RAD51D-216ENST00000588594 CCDC88AQ3V6T2 1871 aa19.47■□□□□ 0.71
RAD51D-216ENST00000588594 DPY19L2Q6NUT2 758 aa19.47■□□□□ 0.71
RAD51D-216ENST00000588594 ISCA1Q9BUE6 129 aa19.47■□□□□ 0.71
RAD51D-216ENST00000588594 STK31Q9BXU1 1019 aa19.47■□□□□ 0.71
RAD51D-216ENST00000588594 NMRK2Q9NPI5 230 aa19.47■□□□□ 0.71
RAD51D-216ENST00000588594 TIAM2Q8IVF5 1701 aa19.46■□□□□ 0.71
RAD51D-216ENST00000588594 GLTPD2A6NH11 291 aa19.46■□□□□ 0.71
RAD51D-216ENST00000588594 TOMM70O94826 608 aa19.46■□□□□ 0.71
RAD51D-216ENST00000588594 TRIM28Q13263 835 aaKnown RBP19.46■□□□□ 0.71
RAD51D-216ENST00000588594 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
RAD51D-216ENST00000588594 C16orf71Q8IYS4 520 aaPredicted RBP19.45■□□□□ 0.7
RAD51D-216ENST00000588594 TSPYL6Q8N831 410 aa19.45■□□□□ 0.7
RAD51D-216ENST00000588594 PHAXQ9H814 394 aaKnown RBP19.45■□□□□ 0.7
RAD51D-216ENST00000588594 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
RAD51D-216ENST00000588594 DICER1Q9UPY3 1922 aaKnown RBP19.45■□□□□ 0.7
RAD51D-216ENST00000588594 TMX4Q9H1E5 349 aaPredicted RBP19.44■□□□□ 0.7
RAD51D-216ENST00000588594 ATP5J2-PTCD1G3V325 749 aa19.43■□□□□ 0.7
RAD51D-216ENST00000588594 FANCIQ9NVI1 1328 aa19.43■□□□□ 0.7
RAD51D-216ENST00000588594 PPEF1O14829 653 aaPredicted RBP19.42■□□□□ 0.7
RAD51D-216ENST00000588594 HCLS1P14317 486 aaPredicted RBP19.42■□□□□ 0.7
RAD51D-216ENST00000588594 HSP90B1P14625 803 aaKnown RBP19.42■□□□□ 0.7
RAD51D-216ENST00000588594 C3orf67Q6ZVT6 689 aa19.42■□□□□ 0.7
RAD51D-216ENST00000588594 PSMD1Q99460 953 aa19.42■□□□□ 0.7
RAD51D-216ENST00000588594 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
RAD51D-216ENST00000588594 DDX46Q7L014 1031 aaKnown RBP19.42■□□□□ 0.7
RAD51D-216ENST00000588594 BBOX1O75936 387 aa19.41■□□□□ 0.7
RAD51D-216ENST00000588594 VEGFAP15692 232 aaPredicted RBP19.41■□□□□ 0.7
RAD51D-216ENST00000588594 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
RAD51D-216ENST00000588594 RBM46Q8TBY0 533 aaKnown RBP19.41■□□□□ 0.7
RAD51D-216ENST00000588594 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
RAD51D-216ENST00000588594 SYNE4Q8N205 404 aa19.4■□□□□ 0.7
RAD51D-216ENST00000588594 CCDC191Q8NCU4 936 aa19.4■□□□□ 0.7
RAD51D-216ENST00000588594 FAM89AQ96GI7 184 aa19.4■□□□□ 0.7
RAD51D-216ENST00000588594 MYD88Q99836 296 aa19.4■□□□□ 0.7
RAD51D-216ENST00000588594 METTL22Q9BUU2 404 aaPredicted RBP19.4■□□□□ 0.7
RAD51D-216ENST00000588594 SNED1Q8TER0 1413 aa19.4■□□□□ 0.7
RAD51D-216ENST00000588594 ABCC4O15439 1325 aa19.39■□□□□ 0.69
RAD51D-216ENST00000588594 IARSP41252 1262 aaKnown RBP19.39■□□□□ 0.69
RAD51D-216ENST00000588594 KSR2Q6VAB6 950 aa19.39■□□□□ 0.69
RAD51D-216ENST00000588594 ZBTB38Q8NAP3 1195 aaPredicted RBP19.39■□□□□ 0.69
RAD51D-216ENST00000588594 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
RAD51D-216ENST00000588594 ATP6V0A2Q9Y487 856 aa19.39■□□□□ 0.69
RAD51D-216ENST00000588594 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
RAD51D-216ENST00000588594 HSPA6P17066 643 aa19.38■□□□□ 0.69
RAD51D-216ENST00000588594 NEXNQ0ZGT2 675 aa19.38■□□□□ 0.69
RAD51D-216ENST00000588594 SF3B3Q15393 1217 aaKnown RBP19.38■□□□□ 0.69
RAD51D-216ENST00000588594 TMC4Q7Z404 712 aa19.38■□□□□ 0.69
RAD51D-216ENST00000588594 LAMB2P55268 1798 aa19.38■□□□□ 0.69
RAD51D-216ENST00000588594 IRS4O14654 1257 aaPredicted RBP19.37■□□□□ 0.69
RAD51D-216ENST00000588594 GRAPQ13588 217 aa19.37■□□□□ 0.69
RAD51D-216ENST00000588594 GRAPLQ8TC17 118 aaPredicted RBP19.37■□□□□ 0.69
RAD51D-216ENST00000588594 JDP2Q8WYK2 163 aa19.37■□□□□ 0.69
RAD51D-216ENST00000588594 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
RAD51D-216ENST00000588594 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
RAD51D-216ENST00000588594 WDR90Q96KV7 1748 aa19.36■□□□□ 0.69
RAD51D-216ENST00000588594 PI4KAP2A4QPH2 592 aa19.36■□□□□ 0.69
RAD51D-216ENST00000588594 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
RAD51D-216ENST00000588594 FSTL1Q12841 308 aa19.36■□□□□ 0.69
RAD51D-216ENST00000588594 SP8Q8IXZ3 490 aa19.36■□□□□ 0.69
RAD51D-216ENST00000588594 PI4KAP1Q8N8J0 262 aa19.36■□□□□ 0.69
RAD51D-216ENST00000588594 SUPT20HQ8NEM7 779 aa19.36■□□□□ 0.69
RAD51D-216ENST00000588594 VPS33BQ9H267 617 aa19.36■□□□□ 0.69
RAD51D-216ENST00000588594 DDX60Q8IY21 1712 aaKnown RBP19.36■□□□□ 0.69
RAD51D-216ENST00000588594 TCERG1O14776 1098 aaKnown RBP19.35■□□□□ 0.69
RAD51D-216ENST00000588594 VAMP4O75379 141 aa19.35■□□□□ 0.69
RAD51D-216ENST00000588594 PCCAP05165 728 aaPredicted RBP19.35■□□□□ 0.69
RAD51D-216ENST00000588594 ZNF428Q96B54 188 aa19.35■□□□□ 0.69
RAD51D-216ENST00000588594 CCER2I3L3R5 266 aa19.34■□□□□ 0.69
RAD51D-216ENST00000588594 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms