RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 NUTM1Q86Y26 1132 aa22.12■■□□□ 1.13
RFX1-203ENST00000588520 ZNF521Q96K83 1311 aa22.11■■□□□ 1.13
RFX1-203ENST00000588520 TRIM28Q13263 835 aaKnown RBP22.11■■□□□ 1.13
RFX1-203ENST00000588520 PRPF40BQ6NWY9 871 aaKnown RBP22.11■■□□□ 1.13
RFX1-203ENST00000588520 ZC3H4Q9UPT8 1303 aaKnown RBP22.1■■□□□ 1.13
RFX1-203ENST00000588520 SENP3-EIF4A1A0A087X0R7 540 aa22.1■■□□□ 1.13
RFX1-203ENST00000588520 RIC3Q7Z5B4 369 aa22.1■■□□□ 1.13
RFX1-203ENST00000588520 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
RFX1-203ENST00000588520 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
RFX1-203ENST00000588520 HOXA10P31260 410 aaPredicted RBP22.09■■□□□ 1.13
RFX1-203ENST00000588520 NLRP3Q96P20 1036 aa22.09■■□□□ 1.13
RFX1-203ENST00000588520 LTBP3Q9NS15 1303 aa22.08■■□□□ 1.13
RFX1-203ENST00000588520 TNRC6CQ9HCJ0 1690 aaKnown RBP22.08■■□□□ 1.13
RFX1-203ENST00000588520 PHAXQ9H814 394 aaKnown RBP22.08■■□□□ 1.13
RFX1-203ENST00000588520 LMNB1P20700 586 aa22.07■■□□□ 1.12
RFX1-203ENST00000588520 C9orf131Q5VYM1 1079 aa22.07■■□□□ 1.12
RFX1-203ENST00000588520 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
RFX1-203ENST00000588520 RPGRQ92834 1020 aaKnown RBP22.07■■□□□ 1.12
RFX1-203ENST00000588520 TRMT112Q9UI30 125 aaKnown RBP22.07■■□□□ 1.12
RFX1-203ENST00000588520 CACNA1FO60840 1977 aa22.07■■□□□ 1.12
RFX1-203ENST00000588520 C21orf2O43822 256 aa22.06■■□□□ 1.12
RFX1-203ENST00000588520 VAMP4O75379 141 aa22.06■■□□□ 1.12
RFX1-203ENST00000588520 HSP90B1P14625 803 aaKnown RBP22.06■■□□□ 1.12
RFX1-203ENST00000588520 GRIPAP1Q4V328 841 aa22.06■■□□□ 1.12
RFX1-203ENST00000588520 CC2D2BQ6DHV5 1058 aa22.06■■□□□ 1.12
RFX1-203ENST00000588520 CRAMP1Q96RY5 1269 aa22.06■■□□□ 1.12
RFX1-203ENST00000588520 SLX4Q8IY92 1834 aa22.06■■□□□ 1.12
RFX1-203ENST00000588520 EXOSC9Q06265 439 aaKnown RBP22.05■■□□□ 1.12
RFX1-203ENST00000588520 CCDC93Q567U6 631 aa22.05■■□□□ 1.12
RFX1-203ENST00000588520 C7orf43Q8WVR3 580 aa22.05■■□□□ 1.12
RFX1-203ENST00000588520 RBM17Q96I25 401 aaKnown RBP22.05■■□□□ 1.12
RFX1-203ENST00000588520 FER1L6Q2WGJ9 1857 aa22.05■■□□□ 1.12
RFX1-203ENST00000588520 E9PSI1 815 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 NFKBIEO00221 500 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 SLC4A2P04920 1241 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 KSR2Q6VAB6 950 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 CCDC191Q8NCU4 936 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 METTL22Q9BUU2 404 aaPredicted RBP22.04■■□□□ 1.12
RFX1-203ENST00000588520 TAOK3Q9H2K8 898 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 GPBP1L1Q9HC44 474 aaPredicted RBP22.04■■□□□ 1.12
RFX1-203ENST00000588520 SPINK5Q9NQ38 1064 aaPredicted RBP22.04■■□□□ 1.12
RFX1-203ENST00000588520 RNF181Q9P0P0 153 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 SBF1O95248 1867 aa22.04■■□□□ 1.12
RFX1-203ENST00000588520 RTKN2Q8IZC4 609 aa22.03■■□□□ 1.12
RFX1-203ENST00000588520 CACNA1SQ13698 1873 aa22.02■■□□□ 1.12
RFX1-203ENST00000588520 ATP5J2-PTCD1G3V325 749 aa22.01■■□□□ 1.11
RFX1-203ENST00000588520 RASSF7Q02833 373 aa22.01■■□□□ 1.11
RFX1-203ENST00000588520 NEXNQ0ZGT2 675 aa22.01■■□□□ 1.11
RFX1-203ENST00000588520 ZBTB38Q8NAP3 1195 aaPredicted RBP22.01■■□□□ 1.11
RFX1-203ENST00000588520 PI4KAP2A4QPH2 592 aa22■■□□□ 1.11
RFX1-203ENST00000588520 FLIIQ13045 1269 aa22■■□□□ 1.11
RFX1-203ENST00000588520 PI4KAP1Q8N8J0 262 aa22■■□□□ 1.11
RFX1-203ENST00000588520 MYD88Q99836 296 aa22■■□□□ 1.11
RFX1-203ENST00000588520 MAP3K2Q9Y2U5 619 aa22■■□□□ 1.11
RFX1-203ENST00000588520 TMX4Q9H1E5 349 aaPredicted RBP21.99■■□□□ 1.11
RFX1-203ENST00000588520 CWC25Q9NXE8 425 aaPredicted RBP21.99■■□□□ 1.11
RFX1-203ENST00000588520 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
RFX1-203ENST00000588520 FKBP4Q02790 459 aaKnown RBP eCLIP21.98■■□□□ 1.11
RFX1-203ENST00000588520 TMC4Q7Z404 712 aa21.98■■□□□ 1.11
RFX1-203ENST00000588520 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
RFX1-203ENST00000588520 KDM2BQ8NHM5 1336 aa21.98■■□□□ 1.11
RFX1-203ENST00000588520 BBOX1O75936 387 aa21.97■■□□□ 1.11
RFX1-203ENST00000588520 PCCAP05165 728 aaPredicted RBP21.97■■□□□ 1.11
RFX1-203ENST00000588520 HCLS1P14317 486 aaPredicted RBP21.97■■□□□ 1.11
RFX1-203ENST00000588520 SF3B3Q15393 1217 aaKnown RBP21.97■■□□□ 1.11
RFX1-203ENST00000588520 C3orf67Q6ZVT6 689 aa21.97■■□□□ 1.11
RFX1-203ENST00000588520 DDX46Q7L014 1031 aaKnown RBP21.97■■□□□ 1.11
RFX1-203ENST00000588520 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
RFX1-203ENST00000588520 PSMD1Q99460 953 aa21.97■■□□□ 1.11
RFX1-203ENST00000588520 LAMB2P55268 1798 aa21.97■■□□□ 1.11
RFX1-203ENST00000588520 IRS4O14654 1257 aaPredicted RBP21.96■■□□□ 1.11
RFX1-203ENST00000588520 PPEF1O14829 653 aaPredicted RBP21.96■■□□□ 1.11
RFX1-203ENST00000588520 SLFN5Q08AF3 891 aa21.96■■□□□ 1.11
RFX1-203ENST00000588520 FKBP5Q13451 457 aaPredicted RBP21.96■■□□□ 1.11
RFX1-203ENST00000588520 SNED1Q8TER0 1413 aa21.96■■□□□ 1.11
RFX1-203ENST00000588520 DICER1Q9UPY3 1922 aaKnown RBP21.96■■□□□ 1.11
RFX1-203ENST00000588520 DDX60Q8IY21 1712 aaKnown RBP21.95■■□□□ 1.1
RFX1-203ENST00000588520 TCERG1O14776 1098 aaKnown RBP21.95■■□□□ 1.1
RFX1-203ENST00000588520 PRELPP51888 382 aa21.95■■□□□ 1.1
RFX1-203ENST00000588520 G2E3Q7L622 706 aa21.95■■□□□ 1.1
RFX1-203ENST00000588520 ABCC4O15439 1325 aa21.95■■□□□ 1.1
RFX1-203ENST00000588520 GRAPQ13588 217 aa21.94■■□□□ 1.1
RFX1-203ENST00000588520 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
RFX1-203ENST00000588520 GRAPLQ8TC17 118 aaPredicted RBP21.94■■□□□ 1.1
RFX1-203ENST00000588520 DNAAF4Q8WXU2 420 aa21.94■■□□□ 1.1
RFX1-203ENST00000588520 ATP6V0A2Q9Y487 856 aa21.94■■□□□ 1.1
RFX1-203ENST00000588520 CDHR2Q9BYE9 1310 aa21.94■■□□□ 1.1
RFX1-203ENST00000588520 TIAM2Q8IVF5 1701 aa21.93■■□□□ 1.1
RFX1-203ENST00000588520 MIER1Q8N108 512 aa21.93■■□□□ 1.1
RFX1-203ENST00000588520 ZNF526Q8TF50 670 aaPredicted RBP21.93■■□□□ 1.1
RFX1-203ENST00000588520 CCDC88AQ3V6T2 1871 aa21.92■■□□□ 1.1
RFX1-203ENST00000588520 GLTPD2A6NH11 291 aa21.92■■□□□ 1.1
RFX1-203ENST00000588520 IGKV5-2P06315 115 aa21.92■■□□□ 1.1
RFX1-203ENST00000588520 CT47B1P0C2W7 299 aaPredicted RBP21.92■■□□□ 1.1
RFX1-203ENST00000588520 DPY19L2Q6NUT2 758 aa21.92■■□□□ 1.1
RFX1-203ENST00000588520 SP8Q8IXZ3 490 aa21.92■■□□□ 1.1
RFX1-203ENST00000588520 LINS1Q8NG48 757 aa21.92■■□□□ 1.1
RFX1-203ENST00000588520 VPS33BQ9H267 617 aa21.92■■□□□ 1.1
RFX1-203ENST00000588520 NEURL1BA8MQ27 555 aa21.91■■□□□ 1.1
RFX1-203ENST00000588520 PDE8AO60658 829 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms