RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
SDF2-207ENST00000588472 TSPYL6Q8N831 410 aa11.44□□□□□ -0.58
SDF2-207ENST00000588472 SMC1BQ8NDV3 1235 aa11.44□□□□□ -0.58
SDF2-207ENST00000588472 RPGRQ92834 1020 aaKnown RBP11.44□□□□□ -0.58
SDF2-207ENST00000588472 UTP14AQ9BVJ6 771 aaKnown RBP11.44□□□□□ -0.58
SDF2-207ENST00000588472 HYPKQ9NX55 129 aa11.44□□□□□ -0.58
SDF2-207ENST00000588472 ABCC12Q96J65 1359 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 ATP5J2-PTCD1G3V325 749 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 TCIRG1Q13488 830 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 PARP10Q53GL7 1025 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 HSP90AB3PQ58FF7 597 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 OLFM4Q6UX06 510 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 PHAXQ9H814 394 aaKnown RBP11.43□□□□□ -0.58
SDF2-207ENST00000588472 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 DLEC1Q9Y238 1755 aa11.43□□□□□ -0.58
SDF2-207ENST00000588472 CACNA1SQ13698 1873 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 NFKBIEO00221 500 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 NTSR2O95665 410 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 LMNB1P20700 586 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 RTL5Q5HYW3 569 aaPredicted RBP11.42□□□□□ -0.58
SDF2-207ENST00000588472 RIC3Q7Z5B4 369 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 PLBD2Q8NHP8 589 aa11.42□□□□□ -0.58
SDF2-207ENST00000588472 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
SDF2-207ENST00000588472 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
SDF2-207ENST00000588472 ALDH1B1P30837 517 aa11.41□□□□□ -0.58
SDF2-207ENST00000588472 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
SDF2-207ENST00000588472 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
SDF2-207ENST00000588472 C3orf67Q6ZVT6 689 aa11.41□□□□□ -0.58
SDF2-207ENST00000588472 NLRP3Q96P20 1036 aa11.41□□□□□ -0.58
SDF2-207ENST00000588472 SLX4Q8IY92 1834 aa11.41□□□□□ -0.58
SDF2-207ENST00000588472 KLRG2A4D1S0 409 aaPredicted RBP11.4□□□□□ -0.58
SDF2-207ENST00000588472 HSPA1AP0DMV8 641 aaKnown RBP11.4□□□□□ -0.58
SDF2-207ENST00000588472 HSPA1BP0DMV9 641 aaKnown RBP11.4□□□□□ -0.58
SDF2-207ENST00000588472 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.58
SDF2-207ENST00000588472 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
SDF2-207ENST00000588472 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.59
SDF2-207ENST00000588472 IL16Q14005 1332 aa11.39□□□□□ -0.59
SDF2-207ENST00000588472 CCDC93Q567U6 631 aa11.39□□□□□ -0.59
SDF2-207ENST00000588472 SOGA3Q5TF21 947 aa11.39□□□□□ -0.59
SDF2-207ENST00000588472 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
SDF2-207ENST00000588472 FAM89AQ96GI7 184 aa11.39□□□□□ -0.59
SDF2-207ENST00000588472 RBM17Q96I25 401 aaKnown RBP11.39□□□□□ -0.59
SDF2-207ENST00000588472 MYD88Q99836 296 aa11.39□□□□□ -0.59
SDF2-207ENST00000588472 STK31Q9BXU1 1019 aa11.39□□□□□ -0.59
SDF2-207ENST00000588472 SH3TC1Q8TE82 1336 aa11.38□□□□□ -0.59
SDF2-207ENST00000588472 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
SDF2-207ENST00000588472 ZC3H4Q9UPT8 1303 aaKnown RBP11.38□□□□□ -0.59
SDF2-207ENST00000588472 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
SDF2-207ENST00000588472 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
SDF2-207ENST00000588472 SLC51AQ86UW1 340 aa11.38□□□□□ -0.59
SDF2-207ENST00000588472 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
SDF2-207ENST00000588472 JARID2Q92833 1246 aaPredicted RBP11.38□□□□□ -0.59
SDF2-207ENST00000588472 CHMP4AQ9BY43 222 aa11.38□□□□□ -0.59
SDF2-207ENST00000588472 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
SDF2-207ENST00000588472 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
SDF2-207ENST00000588472 IBTKQ9P2D0 1353 aaPredicted RBP11.38□□□□□ -0.59
SDF2-207ENST00000588472 SBF1O95248 1867 aa11.38□□□□□ -0.59
SDF2-207ENST00000588472 PPEF1O14829 653 aaPredicted RBP11.37□□□□□ -0.59
SDF2-207ENST00000588472 DDX58O95786 925 aaKnown RBP11.37□□□□□ -0.59
SDF2-207ENST00000588472 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
SDF2-207ENST00000588472 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
SDF2-207ENST00000588472 HOXA10P31260 410 aaPredicted RBP11.37□□□□□ -0.59
SDF2-207ENST00000588472 SLC10A5Q5PT55 438 aa11.37□□□□□ -0.59
SDF2-207ENST00000588472 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
SDF2-207ENST00000588472 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
SDF2-207ENST00000588472 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
SDF2-207ENST00000588472 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
SDF2-207ENST00000588472 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
SDF2-207ENST00000588472 G2E3Q7L622 706 aa11.36□□□□□ -0.59
SDF2-207ENST00000588472 RTKN2Q8IZC4 609 aa11.36□□□□□ -0.59
SDF2-207ENST00000588472 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
SDF2-207ENST00000588472 TMX4Q9H1E5 349 aaPredicted RBP11.36□□□□□ -0.59
SDF2-207ENST00000588472 MAP3K2Q9Y2U5 619 aa11.36□□□□□ -0.59
SDF2-207ENST00000588472 PI4KAP2A4QPH2 592 aa11.35□□□□□ -0.59
SDF2-207ENST00000588472 GLTPD2A6NH11 291 aa11.35□□□□□ -0.59
SDF2-207ENST00000588472 IRS4O14654 1257 aaPredicted RBP11.35□□□□□ -0.59
SDF2-207ENST00000588472 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
SDF2-207ENST00000588472 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
SDF2-207ENST00000588472 PI4KAP1Q8N8J0 262 aa11.35□□□□□ -0.59
SDF2-207ENST00000588472 MYH16Q9H6N6 1097 aa11.35□□□□□ -0.59
SDF2-207ENST00000588472 ABCC4O15439 1325 aa11.35□□□□□ -0.59
SDF2-207ENST00000588472 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
SDF2-207ENST00000588472 FER1L6Q2WGJ9 1857 aa11.34□□□□□ -0.59
SDF2-207ENST00000588472 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
SDF2-207ENST00000588472 VAMP4O75379 141 aa11.34□□□□□ -0.59
SDF2-207ENST00000588472 KSR2Q6VAB6 950 aa11.34□□□□□ -0.59
SDF2-207ENST00000588472 CCDC85AQ96PX6 553 aaPredicted RBP11.34□□□□□ -0.59
SDF2-207ENST00000588472 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
SDF2-207ENST00000588472 CWC25Q9NXE8 425 aaPredicted RBP11.34□□□□□ -0.59
SDF2-207ENST00000588472 LTBP3Q9NS15 1303 aa11.34□□□□□ -0.59
SDF2-207ENST00000588472 DDNO94850 711 aaPredicted RBP11.33□□□□□ -0.6
SDF2-207ENST00000588472 IARSP41252 1262 aaKnown RBP11.33□□□□□ -0.6
SDF2-207ENST00000588472 NEXNQ0ZGT2 675 aa11.33□□□□□ -0.6
SDF2-207ENST00000588472 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
SDF2-207ENST00000588472 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
SDF2-207ENST00000588472 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
SDF2-207ENST00000588472 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms