RNA–Protein interactions for RNA: ENST00000588428.5

NCLN-204, Transcript of nicalin, humanhuman

TSL 5

Gene NCLN, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-204ENST00000588428 C8orf58Q8NAV2 365 aa27.17■■□□□ 1.94
NCLN-204ENST00000588428 C7orf43Q8WVR3 580 aa27.17■■□□□ 1.94
NCLN-204ENST00000588428 LAMB2P55268 1798 aa27.17■■□□□ 1.94
NCLN-204ENST00000588428 CACNA1FO60840 1977 aa27.17■■□□□ 1.94
NCLN-204ENST00000588428 ZNF526Q8TF50 670 aaPredicted RBP27.16■■□□□ 1.94
NCLN-204ENST00000588428 ALDH1B1P30837 517 aa27.15■■□□□ 1.94
NCLN-204ENST00000588428 PRELPP51888 382 aa27.15■■□□□ 1.94
NCLN-204ENST00000588428 SLC10A5Q5PT55 438 aa27.15■■□□□ 1.94
NCLN-204ENST00000588428 ANKRD13DQ6ZTN6 518 aa27.15■■□□□ 1.94
NCLN-204ENST00000588428 NLRP10Q86W26 655 aa27.15■■□□□ 1.94
NCLN-204ENST00000588428 UTP14AQ9BVJ6 771 aaKnown RBP27.15■■□□□ 1.94
NCLN-204ENST00000588428 HOXA10P31260 410 aaPredicted RBP27.14■■□□□ 1.94
NCLN-204ENST00000588428 WDR63Q8IWG1 891 aa27.13■■□□□ 1.93
NCLN-204ENST00000588428 ELL2O00472 640 aaPredicted RBP27.12■■□□□ 1.93
NCLN-204ENST00000588428 KIF3CO14782 793 aa27.12■■□□□ 1.93
NCLN-204ENST00000588428 CCDC30Q5VVM6 783 aa27.12■■□□□ 1.93
NCLN-204ENST00000588428 TAOK3Q9H2K8 898 aa27.12■■□□□ 1.93
NCLN-204ENST00000588428 CCDC93Q567U6 631 aa27.11■■□□□ 1.93
NCLN-204ENST00000588428 TSR2Q969E8 191 aaKnown RBP27.11■■□□□ 1.93
NCLN-204ENST00000588428 ISCA1Q9BUE6 129 aa27.11■■□□□ 1.93
NCLN-204ENST00000588428 ZNF219Q9P2Y4 722 aaPredicted RBP27.11■■□□□ 1.93
NCLN-204ENST00000588428 DDX60Q8IY21 1712 aaKnown RBP27.1■■□□□ 1.93
NCLN-204ENST00000588428 TSPYL6Q8N831 410 aa27.1■■□□□ 1.93
NCLN-204ENST00000588428 SNED1Q8TER0 1413 aa27.09■■□□□ 1.93
NCLN-204ENST00000588428 TRIM28Q13263 835 aaKnown RBP27.09■■□□□ 1.93
NCLN-204ENST00000588428 FAM9BQ8IZU0 186 aa27.09■■□□□ 1.93
NCLN-204ENST00000588428 RPGRQ92834 1020 aaKnown RBP27.09■■□□□ 1.93
NCLN-204ENST00000588428 NLRP3Q96P20 1036 aa27.09■■□□□ 1.93
NCLN-204ENST00000588428 CRAMP1Q96RY5 1269 aa27.09■■□□□ 1.93
NCLN-204ENST00000588428 KDM2BQ8NHM5 1336 aa27.09■■□□□ 1.93
NCLN-204ENST00000588428 SH3TC1Q8TE82 1336 aa27.08■■□□□ 1.93
NCLN-204ENST00000588428 SENP3-EIF4A1A0A087X0R7 540 aa27.07■■□□□ 1.92
NCLN-204ENST00000588428 GOLGA2Q08379 1002 aa27.07■■□□□ 1.92
NCLN-204ENST00000588428 PHAXQ9H814 394 aaKnown RBP27.07■■□□□ 1.92
NCLN-204ENST00000588428 CC2D2BQ6DHV5 1058 aa27.06■■□□□ 1.92
NCLN-204ENST00000588428 C3orf67Q6ZVT6 689 aa27.06■■□□□ 1.92
NCLN-204ENST00000588428 RTKN2Q8IZC4 609 aa27.06■■□□□ 1.92
NCLN-204ENST00000588428 RBM17Q96I25 401 aaKnown RBP27.06■■□□□ 1.92
NCLN-204ENST00000588428 TRMT112Q9UI30 125 aaKnown RBP27.06■■□□□ 1.92
NCLN-204ENST00000588428 FANCIQ9NVI1 1328 aa27.06■■□□□ 1.92
NCLN-204ENST00000588428 TWISTNBQ3B726 338 aaPredicted RBP27.05■■□□□ 1.92
NCLN-204ENST00000588428 FKBP4Q02790 459 aaKnown RBP eCLIP27.04■■□□□ 1.925e-6■■■□□ 17
NCLN-204ENST00000588428 GRIPAP1Q4V328 841 aa27.04■■□□□ 1.92
NCLN-204ENST00000588428 NMRK2Q9NPI5 230 aa27.04■■□□□ 1.92
NCLN-204ENST00000588428 GLTPD2A6NH11 291 aa27.03■■□□□ 1.92
NCLN-204ENST00000588428 RIC3Q7Z5B4 369 aa27.03■■□□□ 1.92
NCLN-204ENST00000588428 WDR90Q96KV7 1748 aa27.03■■□□□ 1.92
NCLN-204ENST00000588428 DDX58O95786 925 aaKnown RBP27.02■■□□□ 1.92
NCLN-204ENST00000588428 STK31Q9BXU1 1019 aa27.02■■□□□ 1.92
NCLN-204ENST00000588428 PSMD1Q99460 953 aa27.01■■□□□ 1.91
NCLN-204ENST00000588428 SALL2Q9Y467 1007 aaPredicted RBP27.01■■□□□ 1.91
NCLN-204ENST00000588428 ATP5J2-PTCD1G3V325 749 aa27■■□□□ 1.91
NCLN-204ENST00000588428 TOMM70O94826 608 aa27■■□□□ 1.91
NCLN-204ENST00000588428 HCLS1P14317 486 aaPredicted RBP27■■□□□ 1.91
NCLN-204ENST00000588428 OLFM4Q6UX06 510 aa27■■□□□ 1.91
NCLN-204ENST00000588428 SYNE4Q8N205 404 aa27■■□□□ 1.91
NCLN-204ENST00000588428 ZNF521Q96K83 1311 aa26.99■■□□□ 1.91
NCLN-204ENST00000588428 TAF1P21675 1872 aa26.98■■□□□ 1.91
NCLN-204ENST00000588428 ABCC4O15439 1325 aa26.98■■□□□ 1.91
NCLN-204ENST00000588428 PPEF1O14829 653 aaPredicted RBP26.98■■□□□ 1.91
NCLN-204ENST00000588428 METTL22Q9BUU2 404 aaPredicted RBP26.98■■□□□ 1.91
NCLN-204ENST00000588428 LRRC37AA6NMS7 1700 aa26.97■■□□□ 1.91
NCLN-204ENST00000588428 KSR2Q6VAB6 950 aa26.97■■□□□ 1.91
NCLN-204ENST00000588428 CCDC191Q8NCU4 936 aa26.97■■□□□ 1.91
NCLN-204ENST00000588428 MYH16Q9H6N6 1097 aa26.97■■□□□ 1.91
NCLN-204ENST00000588428 CCER2I3L3R5 266 aa26.96■■□□□ 1.91
NCLN-204ENST00000588428 VAMP4O75379 141 aa26.96■■□□□ 1.91
NCLN-204ENST00000588428 SF3B3Q15393 1217 aaKnown RBP26.96■■□□□ 1.91
NCLN-204ENST00000588428 DPY19L2Q6NUT2 758 aa26.96■■□□□ 1.91
NCLN-204ENST00000588428 ZBTB38Q8NAP3 1195 aaPredicted RBP26.96■■□□□ 1.91
NCLN-204ENST00000588428 FAM89AQ96GI7 184 aa26.96■■□□□ 1.91
NCLN-204ENST00000588428 MYD88Q99836 296 aa26.96■■□□□ 1.91
NCLN-204ENST00000588428 SPINK5Q9NQ38 1064 aaPredicted RBP26.96■■□□□ 1.91
NCLN-204ENST00000588428 BBOX1O75936 387 aa26.95■■□□□ 1.9
NCLN-204ENST00000588428 RRAGCQ9HB90 399 aa26.95■■□□□ 1.9
NCLN-204ENST00000588428 ATP6V0A2Q9Y487 856 aa26.95■■□□□ 1.9
NCLN-204ENST00000588428 HSP90B1P14625 803 aaKnown RBP26.94■■□□□ 1.9
NCLN-204ENST00000588428 IARSP41252 1262 aaKnown RBP26.94■■□□□ 1.9
NCLN-204ENST00000588428 EXOSC9Q06265 439 aaKnown RBP26.94■■□□□ 1.9
NCLN-204ENST00000588428 DDX46Q7L014 1031 aaKnown RBP26.94■■□□□ 1.9
NCLN-204ENST00000588428 RBM46Q8TBY0 533 aaKnown RBP26.94■■□□□ 1.9
NCLN-204ENST00000588428 ZNF277Q9NRM2 450 aaPredicted RBP26.94■■□□□ 1.9
NCLN-204ENST00000588428 MAP3K2Q9Y2U5 619 aa26.94■■□□□ 1.9
NCLN-204ENST00000588428 MYH3P11055 1940 aa26.94■■□□□ 1.9
NCLN-204ENST00000588428 SCN4AP35499 1836 aa26.93■■□□□ 1.9
NCLN-204ENST00000588428 SLC4A2P04920 1241 aa26.93■■□□□ 1.9
NCLN-204ENST00000588428 GRAPQ13588 217 aa26.93■■□□□ 1.9
NCLN-204ENST00000588428 GRAPLQ8TC17 118 aaPredicted RBP26.93■■□□□ 1.9
NCLN-204ENST00000588428 PI4KAP2A4QPH2 592 aa26.92■■□□□ 1.9
NCLN-204ENST00000588428 PCCAP05165 728 aaPredicted RBP26.92■■□□□ 1.9
NCLN-204ENST00000588428 VEGFAP15692 232 aaPredicted RBP26.92■■□□□ 1.9
NCLN-204ENST00000588428 TMC4Q7Z404 712 aa26.92■■□□□ 1.9
NCLN-204ENST00000588428 PI4KAP1Q8N8J0 262 aa26.92■■□□□ 1.9
NCLN-204ENST00000588428 CWC25Q9NXE8 425 aaPredicted RBP26.92■■□□□ 1.9
NCLN-204ENST00000588428 IRS4O14654 1257 aaPredicted RBP26.91■■□□□ 1.9
NCLN-204ENST00000588428 SP8Q8IXZ3 490 aa26.91■■□□□ 1.9
NCLN-204ENST00000588428 C16orf71Q8IYS4 520 aaPredicted RBP26.91■■□□□ 1.9
NCLN-204ENST00000588428 TCERG1O14776 1098 aaKnown RBP26.9■■□□□ 1.9
NCLN-204ENST00000588428 FLIIQ13045 1269 aa26.9■■□□□ 1.9
NCLN-204ENST00000588428 G2E3Q7L622 706 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms