RNA–Protein interactions for RNA: ENST00000588164.2

LAMA3-209, Transcript of laminin subunit alpha 3, humanhuman

TSL 5

Gene LAMA3, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-209ENST00000588164 CNKSR1Q969H4 720 aa9.37□□□□□ -0.91
LAMA3-209ENST00000588164 ZNF622Q969S3 477 aaKnown RBP eCLIP9.37□□□□□ -0.91
LAMA3-209ENST00000588164 MTMR7Q9Y216 660 aa9.37□□□□□ -0.91
LAMA3-209ENST00000588164 ZNF541Q9H0D2 1346 aa9.36□□□□□ -0.91
LAMA3-209ENST00000588164 HSP90B1P14625 803 aaKnown RBP9.36□□□□□ -0.91
LAMA3-209ENST00000588164 NUBP1P53384 320 aa9.36□□□□□ -0.91
LAMA3-209ENST00000588164 HABP4Q5JVS0 413 aaKnown RBP9.36□□□□□ -0.91
LAMA3-209ENST00000588164 STYK1Q6J9G0 422 aa9.36□□□□□ -0.91
LAMA3-209ENST00000588164 POTEGQ6S5H5 508 aa9.36□□□□□ -0.91
LAMA3-209ENST00000588164 GPC2Q8N158 579 aa9.36□□□□□ -0.91
LAMA3-209ENST00000588164 RNF123Q5XPI4 1314 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 WASHC2AQ641Q2 1341 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 TRAK2O60296 914 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 AOC2O75106 756 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 PTCD1O75127 700 aaKnown RBP9.35□□□□□ -0.91
LAMA3-209ENST00000588164 CDK11BP21127 795 aaKnown RBP9.35□□□□□ -0.91
LAMA3-209ENST00000588164 CABP4P57796 275 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 E2F4Q16254 413 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 TMCO4Q5TGY1 634 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 CST9Q5W186 159 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 PRPF40BQ6NWY9 871 aaKnown RBP9.35□□□□□ -0.91
LAMA3-209ENST00000588164 SAPCD2Q86UD0 394 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 EYA1Q99502 592 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 GGNBP2Q9H3C7 697 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 BCL2L12Q9HB09 334 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 SAGE1Q9NXZ1 904 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 MKI67P46013 3256 aaKnown RBP9.35□□□□□ -0.91
LAMA3-209ENST00000588164 UBR2Q8IWV8 1755 aa9.35□□□□□ -0.91
LAMA3-209ENST00000588164 FZD9O00144 591 aa9.34□□□□□ -0.91
LAMA3-209ENST00000588164 GRM1Q13255 1194 aa9.34□□□□□ -0.91
LAMA3-209ENST00000588164 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
LAMA3-209ENST00000588164 SZT2Q5T011 3432 aa9.34□□□□□ -0.91
LAMA3-209ENST00000588164 SRGNP10124 158 aa9.33□□□□□ -0.92
LAMA3-209ENST00000588164 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
LAMA3-209ENST00000588164 FKBP4Q02790 459 aaKnown RBP eCLIP9.33□□□□□ -0.92
LAMA3-209ENST00000588164 NOGQ13253 232 aa9.33□□□□□ -0.92
LAMA3-209ENST00000588164 C7orf43Q8WVR3 580 aa9.33□□□□□ -0.92
LAMA3-209ENST00000588164 MASTLQ96GX5 879 aa9.33□□□□□ -0.92
LAMA3-209ENST00000588164 RBBP6Q7Z6E9 1792 aaKnown RBP9.32□□□□□ -0.92
LAMA3-209ENST00000588164 CYP19A1P11511 503 aaPredicted RBP9.32□□□□□ -0.92
LAMA3-209ENST00000588164 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
LAMA3-209ENST00000588164 PDE4DQ08499 809 aa9.32□□□□□ -0.92
LAMA3-209ENST00000588164 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
LAMA3-209ENST00000588164 USP50Q70EL3 339 aaPredicted RBP9.32□□□□□ -0.92
LAMA3-209ENST00000588164 CARD11Q9BXL7 1154 aa9.32□□□□□ -0.92
LAMA3-209ENST00000588164 EMILIN1Q9Y6C2 1016 aa9.32□□□□□ -0.92
LAMA3-209ENST00000588164 MRC1P22897 1456 aa9.32□□□□□ -0.92
LAMA3-209ENST00000588164 TRIM66O15016 1216 aa9.31□□□□□ -0.92
LAMA3-209ENST00000588164 MFAP1P55081 439 aaKnown RBP9.31□□□□□ -0.92
LAMA3-209ENST00000588164 AMOTQ4VCS5 1084 aa9.31□□□□□ -0.92
LAMA3-209ENST00000588164 CIAPIN1Q6FI81 312 aa9.31□□□□□ -0.92
LAMA3-209ENST00000588164 PRR5LQ6MZQ0 368 aa9.31□□□□□ -0.92
LAMA3-209ENST00000588164 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
LAMA3-209ENST00000588164 RTKN2Q8IZC4 609 aa9.31□□□□□ -0.92
LAMA3-209ENST00000588164 CUL9Q8IWT3 2517 aa9.3□□□□□ -0.92
LAMA3-209ENST00000588164 A0A087WZG4 1122 aa9.3□□□□□ -0.92
LAMA3-209ENST00000588164 FXR1P51114 621 aaKnown RBP eCLIP9.3□□□□□ -0.92
LAMA3-209ENST00000588164 PKN2Q16513 984 aaKnown RBP9.3□□□□□ -0.92
LAMA3-209ENST00000588164 PLEKHO1Q53GL0 409 aaPredicted RBP9.3□□□□□ -0.92
LAMA3-209ENST00000588164 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
LAMA3-209ENST00000588164 CTU1Q7Z7A3 348 aaKnown RBP9.3□□□□□ -0.92
LAMA3-209ENST00000588164 DNAJC10Q8IXB1 793 aa9.3□□□□□ -0.92
LAMA3-209ENST00000588164 ST20-MTHFSA0A0A6YYL1 179 aa9.29□□□□□ -0.92
LAMA3-209ENST00000588164 PRR29P0C7W0 189 aa9.29□□□□□ -0.92
LAMA3-209ENST00000588164 IARSP41252 1262 aaKnown RBP9.29□□□□□ -0.92
LAMA3-209ENST00000588164 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
LAMA3-209ENST00000588164 MTHFSP49914 203 aa9.29□□□□□ -0.92
LAMA3-209ENST00000588164 NFATC2IPQ8NCF5 419 aa9.29□□□□□ -0.92
LAMA3-209ENST00000588164 TESK2Q96S53 571 aa9.29□□□□□ -0.92
LAMA3-209ENST00000588164 ZNF277Q9NRM2 450 aaPredicted RBP9.29□□□□□ -0.92
LAMA3-209ENST00000588164 ZBTB1Q9Y2K1 713 aa9.29□□□□□ -0.92
LAMA3-209ENST00000588164 SNED1Q8TER0 1413 aa9.29□□□□□ -0.92
LAMA3-209ENST00000588164 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
LAMA3-209ENST00000588164 TRAF5O00463 557 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 CELF2O95319 508 aaKnown RBP9.28□□□□□ -0.92
LAMA3-209ENST00000588164 SCNN1DP51172 638 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 ST5P78524 1137 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 FMR1Q06787 632 aaKnown RBP eCLIP9.28□□□□□ -0.92
LAMA3-209ENST00000588164 C1orf141Q5JVX7 400 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 TBC1D9BQ66K14 1250 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 ZNF530Q6P9A1 599 aaPredicted RBP9.28□□□□□ -0.92
LAMA3-209ENST00000588164 BICDL1Q6ZP65 573 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 KRI1Q8N9T8 703 aaKnown RBP9.28□□□□□ -0.92
LAMA3-209ENST00000588164 CNBD1Q8NA66 436 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 JDP2Q8WYK2 163 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 PSMD1Q99460 953 aa9.28□□□□□ -0.92
LAMA3-209ENST00000588164 PPM1GO15355 546 aaPredicted RBP9.27□□□□□ -0.93
LAMA3-209ENST00000588164 NPR1P16066 1061 aa9.27□□□□□ -0.93
LAMA3-209ENST00000588164 EIF5P55010 431 aaKnown RBP9.27□□□□□ -0.93
LAMA3-209ENST00000588164 EIF6P56537 245 aaKnown RBP9.27□□□□□ -0.93
LAMA3-209ENST00000588164 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
LAMA3-209ENST00000588164 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
LAMA3-209ENST00000588164 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
LAMA3-209ENST00000588164 HPS5Q9UPZ3 1129 aa9.27□□□□□ -0.93
LAMA3-209ENST00000588164 BRCA2P51587 3418 aa9.27□□□□□ -0.93
LAMA3-209ENST00000588164 COL4A5P29400 1685 aa9.26□□□□□ -0.93
LAMA3-209ENST00000588164 KLRG2A4D1S0 409 aaPredicted RBP9.26□□□□□ -0.93
LAMA3-209ENST00000588164 DLL1O00548 723 aa9.26□□□□□ -0.93
LAMA3-209ENST00000588164 EPS15P42566 896 aa9.26□□□□□ -0.93
LAMA3-209ENST00000588164 EIF4A2Q14240 407 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms