RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
VMP1-207ENST00000588131 SUCLG2Q96I99 432 aa14.18□□□□□ -0.14
VMP1-207ENST00000588131 BCL2L12Q9HB09 334 aa14.18□□□□□ -0.14
VMP1-207ENST00000588131 SRP68Q9UHB9 627 aaKnown RBP14.18□□□□□ -0.14
VMP1-207ENST00000588131 UBN2Q6ZU65 1347 aa14.17□□□□□ -0.14
VMP1-207ENST00000588131 CASP7P55210 303 aa14.17□□□□□ -0.14
VMP1-207ENST00000588131 TRIM28Q13263 835 aaKnown RBP14.17□□□□□ -0.14
VMP1-207ENST00000588131 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
VMP1-207ENST00000588131 ZNF34Q8IZ26 560 aa14.17□□□□□ -0.14
VMP1-207ENST00000588131 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
VMP1-207ENST00000588131 KAZALD1Q96I82 304 aa14.17□□□□□ -0.14
VMP1-207ENST00000588131 RWDD1Q9H446 243 aaPredicted RBP14.17□□□□□ -0.14
VMP1-207ENST00000588131 NARFQ9UHQ1 456 aa14.17□□□□□ -0.14
VMP1-207ENST00000588131 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
VMP1-207ENST00000588131 H7C1W4 665 aa14.16□□□□□ -0.14
VMP1-207ENST00000588131 TRAPPC3LQ5T215 181 aa14.16□□□□□ -0.14
VMP1-207ENST00000588131 USPL1Q5W0Q7 1092 aa14.16□□□□□ -0.14
VMP1-207ENST00000588131 CENPQQ7L2Z9 268 aaPredicted RBP14.16□□□□□ -0.14
VMP1-207ENST00000588131 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
VMP1-207ENST00000588131 DEFB132Q7Z7B7 95 aa14.16□□□□□ -0.14
VMP1-207ENST00000588131 RPAP2Q8IXW5 612 aaPredicted RBP14.16□□□□□ -0.14
VMP1-207ENST00000588131 USP42Q9H9J4 1324 aaKnown RBP14.15□□□□□ -0.14
VMP1-207ENST00000588131 SSFA2P28290 1259 aa14.15□□□□□ -0.14
VMP1-207ENST00000588131 BAG6P46379 1132 aa14.15□□□□□ -0.14
VMP1-207ENST00000588131 SF3B2Q13435 895 aaKnown RBP14.15□□□□□ -0.14
VMP1-207ENST00000588131 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
VMP1-207ENST00000588131 ZNF652Q9Y2D9 606 aa14.15□□□□□ -0.14
VMP1-207ENST00000588131 PNMA6EA0A0J9YXQ4 647 aa14.14□□□□□ -0.15
VMP1-207ENST00000588131 RGL2O15211 777 aa14.14□□□□□ -0.15
VMP1-207ENST00000588131 HMGB2P26583 209 aaKnown RBP14.14□□□□□ -0.15
VMP1-207ENST00000588131 RFC4P35249 363 aa14.14□□□□□ -0.15
VMP1-207ENST00000588131 ATP8B2P98198 1209 aa14.14□□□□□ -0.15
VMP1-207ENST00000588131 EPHA10Q5JZY3 1008 aa14.14□□□□□ -0.15
VMP1-207ENST00000588131 CLEC4GQ6UXB4 293 aa14.14□□□□□ -0.15
VMP1-207ENST00000588131 BICC1Q9H694 974 aaKnown RBP14.14□□□□□ -0.15
VMP1-207ENST00000588131 COL24A1Q17RW2 1714 aa14.14□□□□□ -0.15
VMP1-207ENST00000588131 ZPR1O75312 459 aa14.13□□□□□ -0.15
VMP1-207ENST00000588131 PCCAP05165 728 aaPredicted RBP14.13□□□□□ -0.15
VMP1-207ENST00000588131 SUSD4Q5VX71 490 aa14.13□□□□□ -0.15
VMP1-207ENST00000588131 TBC1D9BQ66K14 1250 aa14.13□□□□□ -0.15
VMP1-207ENST00000588131 PPP1R42Q7Z4L9 355 aa14.13□□□□□ -0.15
VMP1-207ENST00000588131 ANO8Q9HCE9 1232 aaPredicted RBP14.13□□□□□ -0.15
VMP1-207ENST00000588131 NIP7Q9Y221 180 aaKnown RBP eCLIP14.13□□□□□ -0.15
VMP1-207ENST00000588131 FAM177BA6PVY3 158 aa14.12□□□□□ -0.15
VMP1-207ENST00000588131 MTX1Q13505 466 aa14.12□□□□□ -0.15
VMP1-207ENST00000588131 SKAP1Q86WV1 359 aa14.12□□□□□ -0.15
VMP1-207ENST00000588131 SYNE4Q8N205 404 aa14.12□□□□□ -0.15
VMP1-207ENST00000588131 ZBTB38Q8NAP3 1195 aaPredicted RBP14.12□□□□□ -0.15
VMP1-207ENST00000588131 FAM89AQ96GI7 184 aa14.12□□□□□ -0.15
VMP1-207ENST00000588131 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
VMP1-207ENST00000588131 FOXO4P98177 505 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 POLA2Q14181 598 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 PARP10Q53GL7 1025 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 BICDL1Q6ZP65 573 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 SMC5Q8IY18 1101 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 SSH3Q8TE77 659 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
VMP1-207ENST00000588131 HDAC5Q9UQL6 1122 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 LAMB2P55268 1798 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 PNPLA7Q6ZV29 1317 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 CDHR2Q9BYE9 1310 aa14.11□□□□□ -0.15
VMP1-207ENST00000588131 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
VMP1-207ENST00000588131 DDX60Q8IY21 1712 aaKnown RBP14.1□□□□□ -0.15
VMP1-207ENST00000588131 SRGAP3O43295 1099 aa14.1□□□□□ -0.15
VMP1-207ENST00000588131 HMMRO75330 724 aa14.1□□□□□ -0.15
VMP1-207ENST00000588131 NTSR2O95665 410 aa14.1□□□□□ -0.15
VMP1-207ENST00000588131 GYS1P13807 737 aa14.1□□□□□ -0.15
VMP1-207ENST00000588131 RABL6Q3YEC7 729 aaPredicted RBP14.1□□□□□ -0.15
VMP1-207ENST00000588131 COL23A1Q86Y22 540 aaPredicted RBP14.1□□□□□ -0.15
VMP1-207ENST00000588131 CCDC125Q86Z20 511 aa14.1□□□□□ -0.15
VMP1-207ENST00000588131 UTP14AQ9BVJ6 771 aaKnown RBP14.1□□□□□ -0.15
VMP1-207ENST00000588131 DCTPP1Q9H773 170 aa14.1□□□□□ -0.15
VMP1-207ENST00000588131 SLC15A2Q16348 729 aa14.09□□□□□ -0.15
VMP1-207ENST00000588131 GCC1Q96CN9 775 aa14.09□□□□□ -0.15
VMP1-207ENST00000588131 PDZRN3Q9UPQ7 1066 aa14.09□□□□□ -0.15
VMP1-207ENST00000588131 IRS4O14654 1257 aaPredicted RBP14.08□□□□□ -0.16
VMP1-207ENST00000588131 NFIXQ14938 502 aa14.08□□□□□ -0.16
VMP1-207ENST00000588131 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.16
VMP1-207ENST00000588131 NUTM1Q86Y26 1132 aa14.08□□□□□ -0.16
VMP1-207ENST00000588131 PLA2G12BQ9BX93 195 aa14.08□□□□□ -0.16
VMP1-207ENST00000588131 STK32BQ9NY57 414 aa14.08□□□□□ -0.16
VMP1-207ENST00000588131 SH3TC1Q8TE82 1336 aa14.08□□□□□ -0.16
VMP1-207ENST00000588131 CASZ1Q86V15 1759 aa14.07□□□□□ -0.16
VMP1-207ENST00000588131 FLAD1Q8NFF5 587 aa14.07□□□□□ -0.16
VMP1-207ENST00000588131 SETDB2Q96T68 719 aa14.07□□□□□ -0.16
VMP1-207ENST00000588131 EXOC6BQ9Y2D4 811 aa14.07□□□□□ -0.16
VMP1-207ENST00000588131 MYH3P11055 1940 aa14.07□□□□□ -0.16
VMP1-207ENST00000588131 HCLS1P14317 486 aaPredicted RBP14.06□□□□□ -0.16
VMP1-207ENST00000588131 RFX5P48382 616 aaPredicted RBP14.06□□□□□ -0.16
VMP1-207ENST00000588131 NUCB1Q02818 461 aa14.06□□□□□ -0.16
VMP1-207ENST00000588131 ERFEQ4G0M1 354 aa14.06□□□□□ -0.16
VMP1-207ENST00000588131 UPF1Q92900 1129 aaKnown RBP eCLIP14.06□□□□□ -0.16
VMP1-207ENST00000588131 PA2G4Q9UQ80 394 aaKnown RBP14.06□□□□□ -0.16
VMP1-207ENST00000588131 CARMIL3Q8ND23 1372 aa14.06□□□□□ -0.16
VMP1-207ENST00000588131 ABCC12Q96J65 1359 aa14.06□□□□□ -0.16
VMP1-207ENST00000588131 PDE8AO60658 829 aa14.05□□□□□ -0.16
VMP1-207ENST00000588131 SURF6O75683 361 aaKnown RBP14.05□□□□□ -0.16
VMP1-207ENST00000588131 CSF1RP07333 972 aa14.05□□□□□ -0.16
VMP1-207ENST00000588131 CTSWP56202 376 aa14.05□□□□□ -0.16
VMP1-207ENST00000588131 ANKRD45Q5TZF3 282 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms