RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	TTC22	Q5TAA0	569 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	GPATCH11	Q8N954	259 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CRYBG1	Q9Y4K1	1723 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SPATA31A1	Q5TZJ5	1347 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SPATA31A5	Q5VU36	1347 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SPATA31A7	Q8IWB4	1347 aa		11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CHAF1A	Q13111	956 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PEAK1	Q9H792	1746 aa		11.31	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	DDX54	Q8TDD1	881 aa	Known RBP	11.31	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	IGSF1	Q8N6C5	1336 aa		11.31	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	RBM6	P78332	1123 aa	Known RBP	11.31	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	TSPYL6	Q8N831	410 aa		11.31	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	KIAA1524	Q8TCG1	905 aa		11.31	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PHF14	O94880	888 aa		11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	BRD1	O95696	1058 aa		11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	INTS3	Q68E01	1043 aa	Known RBP	11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PLEKHF1	Q96S99	279 aa		11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	EXOC5	O00471	708 aa		11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	FCHSD2	O94868	740 aa		11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	POTEA	Q6S8J7	498 aa		11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SYAP1	Q96A49	352 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	C16orf45	Q96MC5	204 aa	Predicted RBP	11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	DIAPH3	Q9NSV4	1193 aa		11.3	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	DDB1	Q16531	1140 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	GIMAP6	Q6P9H5	292 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	THRAP3	Q9Y2W1	955 aa	Known RBP	11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	TCHH	Q07283	1943 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	TSHZ3	Q63HK5	1081 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	ST7	Q9NRC1	585 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	TOMM22	Q9NS69	142 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CTNNA3	Q9UI47	895 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077		V9GYY5	206 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	EGFL6	Q8IUX8	553 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	NCAPG	Q9BPX3	1015 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	RGS17	Q9UGC6	210 aa	Predicted RBP	11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SPG7	Q9UQ90	795 aa		11.29	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	IL16	Q14005	1332 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	KDM4A	O75164	1064 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	SEPT12	Q8IYM1	358 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	ZCRB1	Q8TBF4	217 aa	Known RBP	11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	UPF3B	Q9BZI7	483 aa	Known RBP	11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CNPY2	Q9Y2B0	182 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CEP83	Q9Y592	693 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CTIF	O43310	598 aa	Known RBP	11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PTGS1	P23219	599 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PALD1	Q9ULE6	856 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	RGPD5	Q99666	1765 aa		11.28	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	LRMP	Q12912	555 aa		11.27	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	C1orf141	Q5JVX7	400 aa		11.27	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	LARP6	Q9BRS8	491 aa	Known RBP	11.27	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	PLCH1	Q4KWH8	1693 aa		11.27	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	LMO7	Q8WWI1	1683 aa		11.27	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	ABCC6	O95255	1503 aa		11.27	□□□□□ -0.6
CACNA2D4-223	ENST00000588077	COL18A1	P39060	1754 aa		11.27	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	DHX16	O60231	1041 aa	Known RBP	11.27	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	PHACTR3	Q96KR7	559 aa		11.27	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	RASSF4	Q9H2L5	321 aa		11.27	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	HNRNPH2	P55795	449 aa	Known RBP	11.27	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	RAD51AP2	Q09MP3	1159 aa		11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	AMOT	Q4VCS5	1084 aa		11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	BARGIN	Q6ZT62	677 aa		11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	TAOK2	Q9UL54	1235 aa		11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	ATRN	O75882	1429 aa		11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	NOP2	P46087	812 aa	Known RBP	11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	BRPF1	P55201	1214 aa	Predicted RBP	11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	MRPL50	Q8N5N7	158 aa	Known RBP	11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	FAM184A	Q8NB25	1140 aa		11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	ZNF592	Q92610	1267 aa		11.26	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	FIBP	O43427	364 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	UVSSA	Q2YD98	709 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	ICE2	Q659A1	982 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	KRT222	Q8N1A0	295 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	RTF1	Q92541	710 aa	Known RBP	11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	DDX41	Q9UJV9	622 aa	Known RBP	11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	CCDC172	P0C7W6	258 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	TNNT1	P13805	278 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	FAM182B	Q5T319	152 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	CCDC183	Q5T5S1	534 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	CHMP3	Q9Y3E7	222 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	MTHFSD	Q2M296	383 aa	Known RBP	11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	ALDH1L2	Q3SY69	923 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	CTR9	Q6PD62	1173 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	PLCD4	Q9BRC7	762 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	SRCIN1	Q9C0H9	1055 aa		11.25	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	KRT24	Q2M2I5	525 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	CASC1	Q6TDU7	716 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	TICAM2	Q86XR7	235 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	IFT57	Q9NWB7	429 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	NRBP1	Q9UHY1	535 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	NWD2	Q9ULI1	1742 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	ERC2	O15083	957 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	NPHP1	O15259	732 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	VAMP4	O75379	141 aa		11.24	□□□□□ -0.61
CACNA2D4-223	ENST00000588077	REC8	O95072	547 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms