RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 UQCRHP07919 91 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 MX1P20591 662 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 MCM4P33991 863 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 CWF19L2Q2TBE0 894 aaKnown RBP11.69□□□□□ -0.54
LINC01539-201ENST00000587904 HS1BP3Q53T59 392 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 ERC1Q8IUD2 1116 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 C16orf71Q8IYS4 520 aaPredicted RBP11.69□□□□□ -0.54
LINC01539-201ENST00000587904 PLBD2Q8NHP8 589 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
LINC01539-201ENST00000587904 ITGB4P16144 1822 aa11.69□□□□□ -0.54
LINC01539-201ENST00000587904 AFDNP55196 1824 aaKnown RBP11.69□□□□□ -0.54
LINC01539-201ENST00000587904 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
LINC01539-201ENST00000587904 IGKV5-2P06315 115 aa11.68□□□□□ -0.54
LINC01539-201ENST00000587904 OTUD7AQ8TE49 926 aaPredicted RBP11.68□□□□□ -0.54
LINC01539-201ENST00000587904 SDSP20132 328 aa11.67□□□□□ -0.54
LINC01539-201ENST00000587904 MSNP26038 577 aaKnown RBP11.67□□□□□ -0.54
LINC01539-201ENST00000587904 GCKRQ14397 625 aa11.67□□□□□ -0.54
LINC01539-201ENST00000587904 CSPP1Q1MSJ5 1256 aa11.67□□□□□ -0.54
LINC01539-201ENST00000587904 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
LINC01539-201ENST00000587904 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
LINC01539-201ENST00000587904 MYD88Q99836 296 aa11.67□□□□□ -0.54
LINC01539-201ENST00000587904 BCL9O00512 1426 aa11.67□□□□□ -0.54
LINC01539-201ENST00000587904 EXOC5O00471 708 aa11.66□□□□□ -0.54
LINC01539-201ENST00000587904 TRAK2O60296 914 aa11.66□□□□□ -0.54
LINC01539-201ENST00000587904 ZNF500O60304 480 aaPredicted RBP11.66□□□□□ -0.54
LINC01539-201ENST00000587904 SLIT2O94813 1529 aa11.66□□□□□ -0.54
LINC01539-201ENST00000587904 SPATA31A1Q5TZJ5 1347 aa11.66□□□□□ -0.54
LINC01539-201ENST00000587904 SUCLG2Q96I99 432 aa11.66□□□□□ -0.54
LINC01539-201ENST00000587904 R3HCC1Q9Y3T6 440 aaKnown RBP11.66□□□□□ -0.54
LINC01539-201ENST00000587904 NBPF26B4DH59 902 aa11.65□□□□□ -0.54
LINC01539-201ENST00000587904 CLGNO14967 610 aa11.65□□□□□ -0.54
LINC01539-201ENST00000587904 NBPF14Q5TI25 921 aa11.65□□□□□ -0.54
LINC01539-201ENST00000587904 NBPF10Q6P3W6 841 aaKnown RBP11.65□□□□□ -0.54
LINC01539-201ENST00000587904 NBPF15Q8N660 670 aa11.65□□□□□ -0.54
LINC01539-201ENST00000587904 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
LINC01539-201ENST00000587904 DOT1LQ8TEK3 1739 aa11.65□□□□□ -0.54
LINC01539-201ENST00000587904 USP42Q9H9J4 1324 aaKnown RBP11.65□□□□□ -0.54
LINC01539-201ENST00000587904 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
LINC01539-201ENST00000587904 SASS6Q6UVJ0 657 aa11.64□□□□□ -0.55
LINC01539-201ENST00000587904 PIGBQ92521 554 aa11.64□□□□□ -0.55
LINC01539-201ENST00000587904 BICC1Q9H694 974 aaKnown RBP11.64□□□□□ -0.55
LINC01539-201ENST00000587904 PTCD1O75127 700 aaKnown RBP11.64□□□□□ -0.55
LINC01539-201ENST00000587904 REC8O95072 547 aa11.64□□□□□ -0.55
LINC01539-201ENST00000587904 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
LINC01539-201ENST00000587904 KAZALD1Q96I82 304 aa11.64□□□□□ -0.55
LINC01539-201ENST00000587904 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
LINC01539-201ENST00000587904 CICQ96RK0 1608 aaPredicted RBP11.63□□□□□ -0.55
LINC01539-201ENST00000587904 DDX11L8A8MPP1 907 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 ADAMTS2O95450 1211 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 STARD3NLO95772 234 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 BARGINQ6ZT62 677 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
LINC01539-201ENST00000587904 GPATCH3Q96I76 525 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 TJP1Q07157 1748 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 SPATA31A5Q5VU36 1347 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 SPATA31A7Q8IWB4 1347 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 RABL6Q3YEC7 729 aaPredicted RBP11.63□□□□□ -0.55
LINC01539-201ENST00000587904 SNX21Q969T3 373 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 ATG3Q9NT62 314 aa11.63□□□□□ -0.55
LINC01539-201ENST00000587904 JCADQ9P266 1359 aa11.62□□□□□ -0.55
LINC01539-201ENST00000587904 DDB1Q16531 1140 aa11.62□□□□□ -0.55
LINC01539-201ENST00000587904 AXDND1Q5T1B0 1012 aaPredicted RBP11.62□□□□□ -0.55
LINC01539-201ENST00000587904 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
LINC01539-201ENST00000587904 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
LINC01539-201ENST00000587904 ERC2O15083 957 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 EPB41L2O43491 1005 aaKnown RBP11.61□□□□□ -0.55
LINC01539-201ENST00000587904 A1BGP04217 495 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 MCM5P33992 734 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 PIP4K2AP48426 406 aaPredicted RBP11.61□□□□□ -0.55
LINC01539-201ENST00000587904 G3BP1Q13283 466 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC01539-201ENST00000587904 HSCBQ8IWL3 235 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 CCDC191Q8NCU4 936 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 CWC25Q9NXE8 425 aaPredicted RBP11.61□□□□□ -0.55
LINC01539-201ENST00000587904 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 A0A087WZG4 1122 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 PTMSP20962 102 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 YY1AP1Q9H869 796 aa11.61□□□□□ -0.55
LINC01539-201ENST00000587904 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
LINC01539-201ENST00000587904 H7C1W4 665 aa11.6□□□□□ -0.55
LINC01539-201ENST00000587904 GLRX3O76003 335 aaKnown RBP11.6□□□□□ -0.55
LINC01539-201ENST00000587904 CASP7P55210 303 aa11.6□□□□□ -0.55
LINC01539-201ENST00000587904 KIF6Q6ZMV9 814 aa11.6□□□□□ -0.55
LINC01539-201ENST00000587904 TTLL7Q6ZT98 887 aa11.6□□□□□ -0.55
LINC01539-201ENST00000587904 PI4K2BQ8TCG2 481 aa11.6□□□□□ -0.55
LINC01539-201ENST00000587904 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
LINC01539-201ENST00000587904 COPRSQ9NQ92 184 aa11.6□□□□□ -0.55
LINC01539-201ENST00000587904 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.6□□□□□ -0.55
LINC01539-201ENST00000587904 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
LINC01539-201ENST00000587904 UBE3BQ7Z3V4 1068 aa11.59□□□□□ -0.55
LINC01539-201ENST00000587904 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
LINC01539-201ENST00000587904 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
LINC01539-201ENST00000587904 USP26Q9BXU7 913 aa11.59□□□□□ -0.55
LINC01539-201ENST00000587904 TRIM6-TRIM34B2RNG4 842 aa11.59□□□□□ -0.55
LINC01539-201ENST00000587904 IFIT2P09913 472 aaKnown RBP11.59□□□□□ -0.55
LINC01539-201ENST00000587904 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
LINC01539-201ENST00000587904 CNTROBQ8N137 903 aa11.59□□□□□ -0.55
LINC01539-201ENST00000587904 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01539-201ENST00000587904 SLKQ9H2G2 1235 aaPredicted RBP11.59□□□□□ -0.55
LINC01539-201ENST00000587904 NUTM2BA6NNL0 878 aaPredicted RBP11.58□□□□□ -0.56
LINC01539-201ENST00000587904 NUTM2EB1AL46 878 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms