RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 FIBPO43427 364 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 KCNJ4P48050 445 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 KRT85P78386 507 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 PSME1Q06323 249 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 GOLGA6L6A8MZA4 724 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 ADCY5O95622 1261 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 CCDC192P0DO97 292 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 PTH1RQ03431 593 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 CREB3L3Q68CJ9 461 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 FUCA2Q9BTY2 467 aa22.15■■□□□ 1.14
DDX39A-206ENST00000587730 DDX21Q9NR30 783 aaKnown RBP eCLIP22.15■■□□□ 1.14
DDX39A-206ENST00000587730 RBM8AQ9Y5S9 174 aaKnown RBP22.15■■□□□ 1.14
DDX39A-206ENST00000587730 RFX7Q2KHR2 1363 aa22.14■■□□□ 1.14
DDX39A-206ENST00000587730 USP25Q9UHP3 1055 aa22.14■■□□□ 1.13
DDX39A-206ENST00000587730 KRT32Q14532 448 aa22.13■■□□□ 1.13
DDX39A-206ENST00000587730 TSGA10IPQ3SY00 556 aa22.13■■□□□ 1.13
DDX39A-206ENST00000587730 SCAND2PQ9GZW5 306 aaPredicted RBP22.13■■□□□ 1.13
DDX39A-206ENST00000587730 SLIT3O75094 1523 aa22.13■■□□□ 1.13
DDX39A-206ENST00000587730 KCNQ3O43525 872 aa22.13■■□□□ 1.13
DDX39A-206ENST00000587730 HCLS1P14317 486 aaPredicted RBP22.13■■□□□ 1.13
DDX39A-206ENST00000587730 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
DDX39A-206ENST00000587730 CAMTA1Q9Y6Y1 1673 aa22.12■■□□□ 1.13
DDX39A-206ENST00000587730 MRC1P22897 1456 aa22.12■■□□□ 1.13
DDX39A-206ENST00000587730 LARP1Q6PKG0 1096 aaKnown RBP22.12■■□□□ 1.13
DDX39A-206ENST00000587730 BLOC1S2Q6QNY1 142 aa22.12■■□□□ 1.13
DDX39A-206ENST00000587730 MPRIPQ6WCQ1 1025 aa22.12■■□□□ 1.13
DDX39A-206ENST00000587730 SPTLC3Q9NUV7 552 aa22.12■■□□□ 1.13
DDX39A-206ENST00000587730 JCADQ9P266 1359 aa22.12■■□□□ 1.13
DDX39A-206ENST00000587730 LARP1BQ659C4 914 aaKnown RBP22.11■■□□□ 1.13
DDX39A-206ENST00000587730 TICAM2Q86XR7 235 aa22.11■■□□□ 1.13
DDX39A-206ENST00000587730 LARGE1O95461 756 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 DNM1Q05193 864 aaKnown RBP22.1■■□□□ 1.13
DDX39A-206ENST00000587730 NEXNQ0ZGT2 675 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 ME3Q16798 604 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 ADCK5Q3MIX3 580 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 ARHGEF25Q86VW2 580 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 MYRIPQ8NFW9 859 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 VPS37CA5D8V6 355 aaPredicted RBP22.1■■□□□ 1.13
DDX39A-206ENST00000587730 SLC27A2O14975 620 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
DDX39A-206ENST00000587730 NMIQ13287 307 aaPredicted RBP22.09■■□□□ 1.13
DDX39A-206ENST00000587730 NOLC1Q14978 699 aaKnown RBP eCLIP22.09■■□□□ 1.13
DDX39A-206ENST00000587730 MED23Q9ULK4 1368 aa22.09■■□□□ 1.13
DDX39A-206ENST00000587730 DNTTIP2Q5QJE6 756 aaKnown RBP22.08■■□□□ 1.13
DDX39A-206ENST00000587730 SASH1O94885 1247 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 CAVIN2O95810 425 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 ANXA1P04083 346 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 RPS6KB1P23443 525 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 MAP3K11Q16584 847 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 SUCLG2Q96I99 432 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 FSD1Q9BTV5 496 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 DDX19AQ9NUU7 478 aaKnown RBP22.08■■□□□ 1.12
DDX39A-206ENST00000587730 TPCN1Q9ULQ1 816 aa22.08■■□□□ 1.12
DDX39A-206ENST00000587730 COL15A1P39059 1388 aa22.07■■□□□ 1.12
DDX39A-206ENST00000587730 NPHP3Q7Z494 1330 aa22.07■■□□□ 1.12
DDX39A-206ENST00000587730 GCP02774 474 aa22.07■■□□□ 1.12
DDX39A-206ENST00000587730 PROSER2Q86WR7 435 aaPredicted RBP22.07■■□□□ 1.12
DDX39A-206ENST00000587730 FAM200AQ8TCP9 573 aa22.07■■□□□ 1.12
DDX39A-206ENST00000587730 EAF2Q96CJ1 260 aaPredicted RBP22.07■■□□□ 1.12
DDX39A-206ENST00000587730 PA2G4Q9UQ80 394 aaKnown RBP22.07■■□□□ 1.12
DDX39A-206ENST00000587730 CPA1P15085 419 aa22.06■■□□□ 1.12
DDX39A-206ENST00000587730 GTF2F1P35269 517 aaKnown RBP eCLIP22.06■■□□□ 1.12
DDX39A-206ENST00000587730 ESCO1Q5FWF5 840 aa22.06■■□□□ 1.12
DDX39A-206ENST00000587730 NUP62CLQ9H1M0 184 aa22.06■■□□□ 1.12
DDX39A-206ENST00000587730 BICC1Q9H694 974 aaKnown RBP22.06■■□□□ 1.12
DDX39A-206ENST00000587730 FAM13BQ9NYF5 915 aa22.06■■□□□ 1.12
DDX39A-206ENST00000587730 PXDNQ92626 1479 aa22.06■■□□□ 1.12
DDX39A-206ENST00000587730 CWF19L2Q2TBE0 894 aaKnown RBP22.06■■□□□ 1.12
DDX39A-206ENST00000587730 GIMAP6Q6P9H5 292 aa22.06■■□□□ 1.12
DDX39A-206ENST00000587730 ANKRD24Q8TF21 1146 aa22.06■■□□□ 1.12
DDX39A-206ENST00000587730 SIPA1L3O60292 1781 aaPredicted RBP22.06■■□□□ 1.12
DDX39A-206ENST00000587730 GOLGA6L4A6NEF3 574 aa22.05■■□□□ 1.12
DDX39A-206ENST00000587730 PROSER3Q2NL68 480 aa22.05■■□□□ 1.12
DDX39A-206ENST00000587730 USPL1Q5W0Q7 1092 aa22.05■■□□□ 1.12
DDX39A-206ENST00000587730 LRRC59Q96AG4 307 aaKnown RBP22.05■■□□□ 1.12
DDX39A-206ENST00000587730 ST3GAL1Q11201 340 aa22.04■■□□□ 1.12
DDX39A-206ENST00000587730 FAM227BQ96M60 508 aa22.04■■□□□ 1.12
DDX39A-206ENST00000587730 TCHHQ07283 1943 aa22.04■■□□□ 1.12
DDX39A-206ENST00000587730 ATP5JP18859 108 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 RIC3Q7Z5B4 369 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 CHMP4CQ96CF2 233 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 KAZALD1Q96I82 304 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 LARP6Q9BRS8 491 aaKnown RBP22.03■■□□□ 1.12
DDX39A-206ENST00000587730 COPRSQ9NQ92 184 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 ABCC6O95255 1503 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 MST1RQ04912 1400 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 U3KPZ7 1027 aaPredicted RBP22.03■■□□□ 1.12
DDX39A-206ENST00000587730 TMEM94Q12767 1356 aa22.03■■□□□ 1.12
DDX39A-206ENST00000587730 CHAF1AQ13111 956 aaPredicted RBP22.02■■□□□ 1.12
DDX39A-206ENST00000587730 VSIG10Q8N0Z9 540 aa22.02■■□□□ 1.12
DDX39A-206ENST00000587730 NECAB1Q8N987 351 aa22.01■■□□□ 1.11
DDX39A-206ENST00000587730 A0A0D9SFI3 127 aa22.01■■□□□ 1.11
DDX39A-206ENST00000587730 ZBTB7CA1YPR0 619 aa22.01■■□□□ 1.11
DDX39A-206ENST00000587730 NEURL1BA8MQ27 555 aa22.01■■□□□ 1.11
DDX39A-206ENST00000587730 HMGB1P09429 215 aaKnown RBP22.01■■□□□ 1.11
DDX39A-206ENST00000587730 RBM10P98175 930 aaKnown RBP22.01■■□□□ 1.11
DDX39A-206ENST00000587730 GCKRQ14397 625 aa22.01■■□□□ 1.11
DDX39A-206ENST00000587730 RBM43Q6ZSC3 357 aaKnown RBP22.01■■□□□ 1.11
DDX39A-206ENST00000587730 TTC6Q86TZ1 520 aa22.01■■□□□ 1.11
DDX39A-206ENST00000587730 METTL22Q9BUU2 404 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms