RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
CLPTM1-207ENST00000587537 USP44Q9H0E7 712 aa12.98□□□□□ -0.33
CLPTM1-207ENST00000587537 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 CDHR2Q9BYE9 1310 aa12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 HLFQ16534 295 aa12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 CWF19L2Q2TBE0 894 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 TNNQ9UQP3 1299 aa12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 NIP7Q9Y221 180 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLPTM1-207ENST00000587537 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.33
CLPTM1-207ENST00000587537 H7C1W4 665 aa12.96□□□□□ -0.33
CLPTM1-207ENST00000587537 GYS1P13807 737 aa12.96□□□□□ -0.33
CLPTM1-207ENST00000587537 TPTE2Q6XPS3 522 aa12.96□□□□□ -0.33
CLPTM1-207ENST00000587537 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
CLPTM1-207ENST00000587537 ANO8Q9HCE9 1232 aaPredicted RBP12.96□□□□□ -0.33
CLPTM1-207ENST00000587537 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
CLPTM1-207ENST00000587537 SH3TC1Q8TE82 1336 aa12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 LAMB2P55268 1798 aa12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 ATP5J2-PTCD1G3V325 749 aa12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 HMMRO75330 724 aa12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 COL23A1Q86Y22 540 aaPredicted RBP12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 PLA2G12BQ9BX93 195 aa12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 BCL2L12Q9HB09 334 aa12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 TRMT112Q9UI30 125 aaKnown RBP12.95□□□□□ -0.34
CLPTM1-207ENST00000587537 MYH3P11055 1940 aa12.94□□□□□ -0.34
CLPTM1-207ENST00000587537 MTX1Q13505 466 aa12.94□□□□□ -0.34
CLPTM1-207ENST00000587537 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
CLPTM1-207ENST00000587537 MEIS3Q99687 375 aa12.94□□□□□ -0.34
CLPTM1-207ENST00000587537 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
CLPTM1-207ENST00000587537 UBN2Q6ZU65 1347 aa12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 GPTP24298 496 aa12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 TM4SF1P30408 202 aa12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 IRX6P78412 446 aaPredicted RBP12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 UBE3BQ7Z3V4 1068 aa12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
CLPTM1-207ENST00000587537 NTSR2O95665 410 aa12.92□□□□□ -0.34
CLPTM1-207ENST00000587537 NBPF7P0C2Y1 421 aaPredicted RBP12.92□□□□□ -0.34
CLPTM1-207ENST00000587537 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
CLPTM1-207ENST00000587537 CASP7P55210 303 aa12.92□□□□□ -0.34
CLPTM1-207ENST00000587537 HDAC1Q13547 482 aaPredicted RBP12.92□□□□□ -0.34
CLPTM1-207ENST00000587537 NFIXQ14938 502 aa12.92□□□□□ -0.34
CLPTM1-207ENST00000587537 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
CLPTM1-207ENST00000587537 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 NPHP1O15259 732 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 PDE8AO60658 829 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 ST5P78524 1137 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 SLC10A5Q5PT55 438 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 SUSD4Q5VX71 490 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 CASZ1Q86V15 1759 aa12.91□□□□□ -0.34
CLPTM1-207ENST00000587537 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 HSP90AB4PQ58FF6 505 aa12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 CEP85Q6P2H3 762 aa12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 CCDC136Q96JN2 1154 aa12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 RTL9Q8NET4 1388 aa12.9□□□□□ -0.34
CLPTM1-207ENST00000587537 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
CLPTM1-207ENST00000587537 SERPINB2P05120 415 aa12.89□□□□□ -0.35
CLPTM1-207ENST00000587537 ATP8B2P98198 1209 aa12.89□□□□□ -0.35
CLPTM1-207ENST00000587537 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
CLPTM1-207ENST00000587537 FAM89AQ96GI7 184 aa12.89□□□□□ -0.35
CLPTM1-207ENST00000587537 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 CSF1RP07333 972 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 POLD1P28340 1107 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 CTSWP56202 376 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 CCDC152Q4G0S7 254 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 SSH3Q8TE77 659 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 GCC1Q96CN9 775 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 SUCLG2Q96I99 432 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 BICC1Q9H694 974 aaKnown RBP12.88□□□□□ -0.35
CLPTM1-207ENST00000587537 MMP10P09238 476 aa12.87□□□□□ -0.35
CLPTM1-207ENST00000587537 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
CLPTM1-207ENST00000587537 SMIM5Q71RC9 77 aa12.87□□□□□ -0.35
CLPTM1-207ENST00000587537 CENPQQ7L2Z9 268 aaPredicted RBP12.87□□□□□ -0.35
CLPTM1-207ENST00000587537 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
CLPTM1-207ENST00000587537 SRGAP3O43295 1099 aa12.86□□□□□ -0.35
CLPTM1-207ENST00000587537 PDE6BP35913 854 aa12.86□□□□□ -0.35
CLPTM1-207ENST00000587537 FOXO4P98177 505 aa12.86□□□□□ -0.35
CLPTM1-207ENST00000587537 POLA2Q14181 598 aa12.86□□□□□ -0.35
CLPTM1-207ENST00000587537 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
CLPTM1-207ENST00000587537 PRR5LQ6MZQ0 368 aa12.86□□□□□ -0.35
CLPTM1-207ENST00000587537 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
CLPTM1-207ENST00000587537 KLRG2A4D1S0 409 aaPredicted RBP12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 DDR1Q08345 913 aa12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 R3HDM1Q15032 1099 aaKnown RBP12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 ERFEQ4G0M1 354 aa12.85□□□□□ -0.35
CLPTM1-207ENST00000587537 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms