RNA–Protein interactions for RNA: ENST00000587486.6

CALR-205, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 957 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-205ENST00000587486 DDX60Q8IY21 1712 aaKnown RBP21.61■■□□□ 1.05
CALR-205ENST00000587486 NFKBIEO00221 500 aa21.61■■□□□ 1.05
CALR-205ENST00000587486 RASSF7Q02833 373 aa21.61■■□□□ 1.05
CALR-205ENST00000587486 TWISTNBQ3B726 338 aaPredicted RBP21.61■■□□□ 1.05
CALR-205ENST00000587486 CCDC30Q5VVM6 783 aa21.61■■□□□ 1.05
CALR-205ENST00000587486 PPP1R42Q7Z4L9 355 aa21.61■■□□□ 1.05
CALR-205ENST00000587486 C7orf43Q8WVR3 580 aa21.61■■□□□ 1.05
CALR-205ENST00000587486 ISCA1Q9BUE6 129 aa21.61■■□□□ 1.05
CALR-205ENST00000587486 GTF2E1P29083 439 aaPredicted RBP21.6■■□□□ 1.05
CALR-205ENST00000587486 C3orf67Q6ZVT6 689 aa21.6■■□□□ 1.05
CALR-205ENST00000587486 UTP14AQ9BVJ6 771 aaKnown RBP21.6■■□□□ 1.05
CALR-205ENST00000587486 SNED1Q8TER0 1413 aa21.6■■□□□ 1.05
CALR-205ENST00000587486 TIAM2Q8IVF5 1701 aa21.6■■□□□ 1.05
CALR-205ENST00000587486 CCDC88AQ3V6T2 1871 aa21.59■■□□□ 1.05
CALR-205ENST00000587486 SLC10A5Q5PT55 438 aa21.59■■□□□ 1.05
CALR-205ENST00000587486 C9orf131Q5VYM1 1079 aa21.59■■□□□ 1.05
CALR-205ENST00000587486 C21orf2O43822 256 aa21.58■■□□□ 1.05
CALR-205ENST00000587486 CHMP4AQ9BY43 222 aa21.58■■□□□ 1.05
CALR-205ENST00000587486 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
CALR-205ENST00000587486 HOXA10P31260 410 aaPredicted RBP21.57■■□□□ 1.04
CALR-205ENST00000587486 SYNE4Q8N205 404 aa21.57■■□□□ 1.04
CALR-205ENST00000587486 DICER1Q9UPY3 1922 aaKnown RBP21.57■■□□□ 1.04
CALR-205ENST00000587486 LTBP3Q9NS15 1303 aa21.56■■□□□ 1.04
CALR-205ENST00000587486 TRIM28Q13263 835 aaKnown RBP21.56■■□□□ 1.04
CALR-205ENST00000587486 VAMP4O75379 141 aa21.55■■□□□ 1.04
CALR-205ENST00000587486 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
CALR-205ENST00000587486 GOLGA2Q08379 1002 aa21.55■■□□□ 1.04
CALR-205ENST00000587486 RNF181Q9P0P0 153 aa21.55■■□□□ 1.04
CALR-205ENST00000587486 SH3TC1Q8TE82 1336 aa21.55■■□□□ 1.04
CALR-205ENST00000587486 ATP5J2-PTCD1G3V325 749 aa21.54■■□□□ 1.04
CALR-205ENST00000587486 LMNB1P20700 586 aa21.54■■□□□ 1.04
CALR-205ENST00000587486 ZNF219Q9P2Y4 722 aaPredicted RBP21.54■■□□□ 1.04
CALR-205ENST00000587486 TCERG1O14776 1098 aaKnown RBP21.53■■□□□ 1.04
CALR-205ENST00000587486 ALDH1B1P30837 517 aa21.53■■□□□ 1.04
CALR-205ENST00000587486 RIC3Q7Z5B4 369 aa21.53■■□□□ 1.04
CALR-205ENST00000587486 MYH16Q9H6N6 1097 aa21.53■■□□□ 1.04
CALR-205ENST00000587486 TRMT112Q9UI30 125 aaKnown RBP21.53■■□□□ 1.04
CALR-205ENST00000587486 SOGA3Q5TF21 947 aa21.52■■□□□ 1.04
CALR-205ENST00000587486 OLFM4Q6UX06 510 aa21.52■■□□□ 1.04
CALR-205ENST00000587486 G2E3Q7L622 706 aa21.52■■□□□ 1.04
CALR-205ENST00000587486 CRAMP1Q96RY5 1269 aa21.52■■□□□ 1.04
CALR-205ENST00000587486 STK31Q9BXU1 1019 aa21.52■■□□□ 1.04
CALR-205ENST00000587486 ZC3H4Q9UPT8 1303 aaKnown RBP21.52■■□□□ 1.03
CALR-205ENST00000587486 HCLS1P14317 486 aaPredicted RBP21.51■■□□□ 1.03
CALR-205ENST00000587486 RPGRQ92834 1020 aaKnown RBP21.51■■□□□ 1.03
CALR-205ENST00000587486 ZNF428Q96B54 188 aa21.51■■□□□ 1.03
CALR-205ENST00000587486 NLRP3Q96P20 1036 aa21.51■■□□□ 1.03
CALR-205ENST00000587486 METTL22Q9BUU2 404 aaPredicted RBP21.51■■□□□ 1.03
CALR-205ENST00000587486 GPBP1L1Q9HC44 474 aaPredicted RBP21.51■■□□□ 1.03
CALR-205ENST00000587486 COL4A1P02462 1669 aa21.5■■□□□ 1.03
CALR-205ENST00000587486 DDX58O95786 925 aaKnown RBP21.5■■□□□ 1.03
CALR-205ENST00000587486 CCDC93Q567U6 631 aa21.5■■□□□ 1.03
CALR-205ENST00000587486 SLC51AQ86UW1 340 aa21.5■■□□□ 1.03
CALR-205ENST00000587486 ZNF526Q8TF50 670 aaPredicted RBP21.5■■□□□ 1.03
CALR-205ENST00000587486 TAOK3Q9H2K8 898 aa21.5■■□□□ 1.03
CALR-205ENST00000587486 PI4KAP2A4QPH2 592 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 SLC4A2P04920 1241 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
CALR-205ENST00000587486 KSR2Q6VAB6 950 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 PI4KAP1Q8N8J0 262 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 FAM89AQ96GI7 184 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 MYD88Q99836 296 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 MAP3K2Q9Y2U5 619 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 TAF1P21675 1872 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 LRRC37AA6NMS7 1700 aa21.49■■□□□ 1.03
CALR-205ENST00000587486 IGKV5-2P06315 115 aa21.48■■□□□ 1.03
CALR-205ENST00000587486 CCDC191Q8NCU4 936 aa21.48■■□□□ 1.03
CALR-205ENST00000587486 RBM17Q96I25 401 aaKnown RBP21.48■■□□□ 1.03
CALR-205ENST00000587486 ABCC4O15439 1325 aa21.48■■□□□ 1.03
CALR-205ENST00000587486 FLIIQ13045 1269 aa21.47■■□□□ 1.03
CALR-205ENST00000587486 ZBTB38Q8NAP3 1195 aaPredicted RBP21.47■■□□□ 1.03
CALR-205ENST00000587486 KIF3CO14782 793 aa21.46■■□□□ 1.03
CALR-205ENST00000587486 FKBP4Q02790 459 aaKnown RBP eCLIP21.46■■□□□ 1.03
CALR-205ENST00000587486 MIER1Q8N108 512 aa21.46■■□□□ 1.03
CALR-205ENST00000587486 PPEF1O14829 653 aaPredicted RBP21.45■■□□□ 1.02
CALR-205ENST00000587486 RTKN2Q8IZC4 609 aa21.45■■□□□ 1.02
CALR-205ENST00000587486 COL4A5P29400 1685 aa21.44■■□□□ 1.02
CALR-205ENST00000587486 E9PSI1 815 aa21.44■■□□□ 1.02
CALR-205ENST00000587486 PCCAP05165 728 aaPredicted RBP21.44■■□□□ 1.02
CALR-205ENST00000587486 SLFN5Q08AF3 891 aa21.44■■□□□ 1.02
CALR-205ENST00000587486 SF3B3Q15393 1217 aaKnown RBP21.44■■□□□ 1.02
CALR-205ENST00000587486 CC2D2BQ6DHV5 1058 aa21.44■■□□□ 1.02
CALR-205ENST00000587486 PSMD1Q99460 953 aa21.44■■□□□ 1.02
CALR-205ENST00000587486 NMRK2Q9NPI5 230 aa21.44■■□□□ 1.02
CALR-205ENST00000587486 CWC25Q9NXE8 425 aaPredicted RBP21.44■■□□□ 1.02
CALR-205ENST00000587486 IRS4O14654 1257 aaPredicted RBP21.43■■□□□ 1.02
CALR-205ENST00000587486 C1QTNF8P60827 252 aa21.43■■□□□ 1.02
CALR-205ENST00000587486 RTL5Q5HYW3 569 aaPredicted RBP21.43■■□□□ 1.02
CALR-205ENST00000587486 TRMT2AQ8IZ69 625 aaKnown RBP21.43■■□□□ 1.02
CALR-205ENST00000587486 WDR90Q96KV7 1748 aa21.43■■□□□ 1.02
CALR-205ENST00000587486 NEURL1BA8MQ27 555 aa21.42■■□□□ 1.02
CALR-205ENST00000587486 LTBP1Q14766 1721 aa21.42■■□□□ 1.02
CALR-205ENST00000587486 CDCA7LQ96GN5 454 aa21.42■■□□□ 1.02
CALR-205ENST00000587486 DUOX1Q9NRD9 1551 aa21.42■■□□□ 1.02
CALR-205ENST00000587486 ATP6V0A2Q9Y487 856 aa21.42■■□□□ 1.02
CALR-205ENST00000587486 MYH3P11055 1940 aa21.41■■□□□ 1.02
CALR-205ENST00000587486 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
CALR-205ENST00000587486 CDHR2Q9BYE9 1310 aa21.41■■□□□ 1.02
CALR-205ENST00000587486 FKBP5Q13451 457 aaPredicted RBP21.41■■□□□ 1.02
CALR-205ENST00000587486 GRAPQ13588 217 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms