RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CST9Q5W186 159 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 TLL2Q9Y6L7 1015 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 CEMIPQ8WUJ3 1361 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
SDF2-204ENST00000587338 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
SDF2-204ENST00000587338 MCOLN1Q9GZU1 580 aa11.48□□□□□ -0.57
SDF2-204ENST00000587338 ABCC12Q96J65 1359 aa11.48□□□□□ -0.57
SDF2-204ENST00000587338 COL3A1P02461 1466 aaPredicted RBP11.47□□□□□ -0.57
SDF2-204ENST00000587338 MAP2K2P36507 400 aa11.47□□□□□ -0.57
SDF2-204ENST00000587338 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
SDF2-204ENST00000587338 USP50Q70EL3 339 aaPredicted RBP11.47□□□□□ -0.57
SDF2-204ENST00000587338 RPGRQ92834 1020 aaKnown RBP11.47□□□□□ -0.57
SDF2-204ENST00000587338 TRPM7Q96QT4 1865 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 NBPF26B4DH59 902 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 TCERG1O14776 1098 aaKnown RBP11.46□□□□□ -0.57
SDF2-204ENST00000587338 CA12O43570 354 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 CELF2O95319 508 aaKnown RBP11.46□□□□□ -0.57
SDF2-204ENST00000587338 DGKZQ13574 1117 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 HLFQ16534 295 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 CRY2Q49AN0 593 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 CC2D2BQ6DHV5 1058 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.57
SDF2-204ENST00000587338 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 NUTM1Q86Y26 1132 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 NIM1KQ8IY84 436 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 NBPF15Q8N660 670 aa11.46□□□□□ -0.57
SDF2-204ENST00000587338 RGL2O15211 777 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 PRKAR2BP31323 418 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 MCM10Q7L590 875 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 SAPCD2Q86UD0 394 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 PHACTR3Q96KR7 559 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 ZNF408Q9H9D4 720 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 CASP8AP2Q9UKL3 1982 aa11.45□□□□□ -0.58
SDF2-204ENST00000587338 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
SDF2-204ENST00000587338 PPIP5K2O43314 1243 aa11.44□□□□□ -0.58
SDF2-204ENST00000587338 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
SDF2-204ENST00000587338 NGEFQ8N5V2 710 aa11.44□□□□□ -0.58
SDF2-204ENST00000587338 GLIS2Q9BZE0 524 aaPredicted RBP11.44□□□□□ -0.58
SDF2-204ENST00000587338 ADARB2Q9NS39 739 aaKnown RBP11.44□□□□□ -0.58
SDF2-204ENST00000587338 GPRC5DQ9NZD1 345 aa11.44□□□□□ -0.58
SDF2-204ENST00000587338 KIF7Q2M1P5 1343 aa11.43□□□□□ -0.58
SDF2-204ENST00000587338 AOC3Q16853 763 aa11.43□□□□□ -0.58
SDF2-204ENST00000587338 GRIPAP1Q4V328 841 aa11.43□□□□□ -0.58
SDF2-204ENST00000587338 CIAPIN1Q6FI81 312 aa11.43□□□□□ -0.58
SDF2-204ENST00000587338 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
SDF2-204ENST00000587338 GPTP24298 496 aa11.42□□□□□ -0.58
SDF2-204ENST00000587338 HOXA10P31260 410 aaPredicted RBP11.42□□□□□ -0.58
SDF2-204ENST00000587338 GMPSP49915 693 aaPredicted RBP11.42□□□□□ -0.58
SDF2-204ENST00000587338 RBM17Q96I25 401 aaKnown RBP11.42□□□□□ -0.58
SDF2-204ENST00000587338 HHIPL1Q96JK4 782 aa11.42□□□□□ -0.58
SDF2-204ENST00000587338 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
SDF2-204ENST00000587338 RIC1Q4ADV7 1423 aa11.42□□□□□ -0.58
SDF2-204ENST00000587338 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
SDF2-204ENST00000587338 PER1O15534 1290 aaPredicted RBP11.41□□□□□ -0.58
SDF2-204ENST00000587338 DCTN1Q14203 1278 aa11.41□□□□□ -0.58
SDF2-204ENST00000587338 TMX4Q9H1E5 349 aaPredicted RBP11.41□□□□□ -0.58
SDF2-204ENST00000587338 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 UBN2Q6ZU65 1347 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 SOX10P56693 466 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 CXCL9Q07325 125 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 NOGQ13253 232 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 KIF6Q6ZMV9 814 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 CRAMP1Q96RY5 1269 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 ZBTB3Q9H5J0 574 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 ZNRF3Q9ULT6 936 aa11.4□□□□□ -0.58
SDF2-204ENST00000587338 LAMB4A4D0S4 1761 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 ERVV-1B6SEH8 477 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 HUNKP57058 714 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 TRPM4Q8TD43 1214 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 CFAP53Q96M91 514 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 ZIC5Q96T25 663 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 BCL2L13Q9BXK5 485 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
SDF2-204ENST00000587338 IBTKQ9P2D0 1353 aaPredicted RBP11.39□□□□□ -0.59
SDF2-204ENST00000587338 RAD17O75943 681 aa11.38□□□□□ -0.59
SDF2-204ENST00000587338 NTSR2O95665 410 aa11.38□□□□□ -0.59
SDF2-204ENST00000587338 U2AF1L5P0DN76 240 aaPredicted RBP11.38□□□□□ -0.59
SDF2-204ENST00000587338 MYL6BP14649 208 aa11.38□□□□□ -0.59
SDF2-204ENST00000587338 U2AF1Q01081 240 aaKnown RBP eCLIP11.38□□□□□ -0.59
SDF2-204ENST00000587338 TTLL7Q6ZT98 887 aa11.38□□□□□ -0.59
SDF2-204ENST00000587338 CDC37L1Q7L3B6 337 aa11.38□□□□□ -0.59
SDF2-204ENST00000587338 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
SDF2-204ENST00000587338 RRP7AQ9Y3A4 280 aaKnown RBP11.38□□□□□ -0.59
SDF2-204ENST00000587338 ATP6V0A2Q9Y487 856 aa11.38□□□□□ -0.59
SDF2-204ENST00000587338 CDHR2Q9BYE9 1310 aa11.37□□□□□ -0.59
SDF2-204ENST00000587338 NUP98P52948 1817 aa11.37□□□□□ -0.59
SDF2-204ENST00000587338 HIRAP54198 1017 aaPredicted RBP11.37□□□□□ -0.59
SDF2-204ENST00000587338 TAF7Q15545 349 aaPredicted RBP11.37□□□□□ -0.59
SDF2-204ENST00000587338 DPP8Q6V1X1 898 aaPredicted RBP11.37□□□□□ -0.59
SDF2-204ENST00000587338 ZC3H15Q8WU90 426 aaKnown RBP11.37□□□□□ -0.59
SDF2-204ENST00000587338 VPS33BQ9H267 617 aa11.37□□□□□ -0.59
SDF2-204ENST00000587338 PGAP2Q9UHJ9 254 aa11.37□□□□□ -0.59
SDF2-204ENST00000587338 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
SDF2-204ENST00000587338 ABCC4O15439 1325 aa11.36□□□□□ -0.59
SDF2-204ENST00000587338 SHTN1A0MZ66 631 aa11.36□□□□□ -0.59
SDF2-204ENST00000587338 TNIP1Q15025 636 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms