RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
ATG4D-207ENST00000587256 PRPF40BQ6NWY9 871 aaKnown RBP19.06■□□□□ 0.64
ATG4D-207ENST00000587256 RIC3Q7Z5B4 369 aa19.06■□□□□ 0.64
ATG4D-207ENST00000587256 NLRP10Q86W26 655 aa19.06■□□□□ 0.64
ATG4D-207ENST00000587256 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-207ENST00000587256 KLRG2A4D1S0 409 aaPredicted RBP19.05■□□□□ 0.64
ATG4D-207ENST00000587256 DDX58O95786 925 aaKnown RBP19.05■□□□□ 0.64
ATG4D-207ENST00000587256 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
ATG4D-207ENST00000587256 ZNF521Q96K83 1311 aa19.04■□□□□ 0.64
ATG4D-207ENST00000587256 C21orf2O43822 256 aa19.04■□□□□ 0.64
ATG4D-207ENST00000587256 RASSF7Q02833 373 aa19.04■□□□□ 0.64
ATG4D-207ENST00000587256 RPGRQ92834 1020 aaKnown RBP19.04■□□□□ 0.64
ATG4D-207ENST00000587256 TRMT112Q9UI30 125 aaKnown RBP19.04■□□□□ 0.64
ATG4D-207ENST00000587256 SH3TC1Q8TE82 1336 aa19.03■□□□□ 0.64
ATG4D-207ENST00000587256 SLX4Q8IY92 1834 aa19.03■□□□□ 0.64
ATG4D-207ENST00000587256 ATP5J2-PTCD1G3V325 749 aa19.03■□□□□ 0.64
ATG4D-207ENST00000587256 ZNF428Q96B54 188 aa19.03■□□□□ 0.64
ATG4D-207ENST00000587256 CRY2Q49AN0 593 aa19.02■□□□□ 0.64
ATG4D-207ENST00000587256 C9orf131Q5VYM1 1079 aa19.02■□□□□ 0.64
ATG4D-207ENST00000587256 MIER1Q8N108 512 aa19.02■□□□□ 0.64
ATG4D-207ENST00000587256 ISCA1Q9BUE6 129 aa19.02■□□□□ 0.64
ATG4D-207ENST00000587256 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
ATG4D-207ENST00000587256 SOGA3Q5TF21 947 aa19.01■□□□□ 0.63
ATG4D-207ENST00000587256 ZNF526Q8TF50 670 aaPredicted RBP19.01■□□□□ 0.63
ATG4D-207ENST00000587256 NLRP3Q96P20 1036 aa19.01■□□□□ 0.63
ATG4D-207ENST00000587256 MYD88Q99836 296 aa19.01■□□□□ 0.63
ATG4D-207ENST00000587256 SLC4A2P04920 1241 aa19■□□□□ 0.63
ATG4D-207ENST00000587256 ALDH1B1P30837 517 aa19■□□□□ 0.63
ATG4D-207ENST00000587256 C3orf67Q6ZVT6 689 aa19■□□□□ 0.63
ATG4D-207ENST00000587256 MAP3K2Q9Y2U5 619 aa19■□□□□ 0.63
ATG4D-207ENST00000587256 NFKBIEO00221 500 aa18.99■□□□□ 0.63
ATG4D-207ENST00000587256 VAMP4O75379 141 aa18.99■□□□□ 0.63
ATG4D-207ENST00000587256 HCLS1P14317 486 aaPredicted RBP18.99■□□□□ 0.63
ATG4D-207ENST00000587256 RBM17Q96I25 401 aaKnown RBP18.99■□□□□ 0.63
ATG4D-207ENST00000587256 E9PSI1 815 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 LMNB1P20700 586 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 FLIIQ13045 1269 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 CCDC93Q567U6 631 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 SLC10A5Q5PT55 438 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 KSR2Q6VAB6 950 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 G2E3Q7L622 706 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 SYNE4Q8N205 404 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 METTL22Q9BUU2 404 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-207ENST00000587256 TAOK3Q9H2K8 898 aa18.98■□□□□ 0.63
ATG4D-207ENST00000587256 GPBP1L1Q9HC44 474 aaPredicted RBP18.98■□□□□ 0.63
ATG4D-207ENST00000587256 LAMB2P55268 1798 aa18.97■□□□□ 0.63
ATG4D-207ENST00000587256 PI4KAP2A4QPH2 592 aa18.97■□□□□ 0.63
ATG4D-207ENST00000587256 HOXA10P31260 410 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-207ENST00000587256 NEXNQ0ZGT2 675 aa18.97■□□□□ 0.63
ATG4D-207ENST00000587256 TRIM28Q13263 835 aaKnown RBP18.97■□□□□ 0.63
ATG4D-207ENST00000587256 RTL5Q5HYW3 569 aaPredicted RBP18.97■□□□□ 0.63
ATG4D-207ENST00000587256 PI4KAP1Q8N8J0 262 aa18.97■□□□□ 0.63
ATG4D-207ENST00000587256 FAM89AQ96GI7 184 aa18.97■□□□□ 0.63
ATG4D-207ENST00000587256 TIAM2Q8IVF5 1701 aa18.97■□□□□ 0.63
ATG4D-207ENST00000587256 FER1L6Q2WGJ9 1857 aa18.97■□□□□ 0.63
ATG4D-207ENST00000587256 FKBP5Q13451 457 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-207ENST00000587256 CWC25Q9NXE8 425 aaPredicted RBP18.96■□□□□ 0.63
ATG4D-207ENST00000587256 DDX60Q8IY21 1712 aaKnown RBP18.96■□□□□ 0.63
ATG4D-207ENST00000587256 SBF1O95248 1867 aa18.96■□□□□ 0.63
ATG4D-207ENST00000587256 PPEF1O14829 653 aaPredicted RBP18.95■□□□□ 0.62
ATG4D-207ENST00000587256 CCDC191Q8NCU4 936 aa18.95■□□□□ 0.62
ATG4D-207ENST00000587256 C7orf43Q8WVR3 580 aa18.95■□□□□ 0.62
ATG4D-207ENST00000587256 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
ATG4D-207ENST00000587256 LTBP3Q9NS15 1303 aa18.95■□□□□ 0.62
ATG4D-207ENST00000587256 CACNA1FO60840 1977 aa18.94■□□□□ 0.62
ATG4D-207ENST00000587256 OLFM4Q6UX06 510 aa18.94■□□□□ 0.62
ATG4D-207ENST00000587256 ABCC4O15439 1325 aa18.94■□□□□ 0.62
ATG4D-207ENST00000587256 IRS4O14654 1257 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-207ENST00000587256 PRELPP51888 382 aa18.93■□□□□ 0.62
ATG4D-207ENST00000587256 SLFN5Q08AF3 891 aa18.93■□□□□ 0.62
ATG4D-207ENST00000587256 DDX46Q7L014 1031 aaKnown RBP18.93■□□□□ 0.62
ATG4D-207ENST00000587256 ZBTB38Q8NAP3 1195 aaPredicted RBP18.93■□□□□ 0.62
ATG4D-207ENST00000587256 ZC3H4Q9UPT8 1303 aaKnown RBP18.93■□□□□ 0.62
ATG4D-207ENST00000587256 HSP90B1P14625 803 aaKnown RBP18.92■□□□□ 0.62
ATG4D-207ENST00000587256 RTKN2Q8IZC4 609 aa18.92■□□□□ 0.62
ATG4D-207ENST00000587256 CDCA7LQ96GN5 454 aa18.92■□□□□ 0.62
ATG4D-207ENST00000587256 TMX4Q9H1E5 349 aaPredicted RBP18.92■□□□□ 0.62
ATG4D-207ENST00000587256 PCCAP05165 728 aaPredicted RBP18.91■□□□□ 0.62
ATG4D-207ENST00000587256 FKBP4Q02790 459 aaKnown RBP eCLIP18.91■□□□□ 0.62
ATG4D-207ENST00000587256 CWF19L2Q2TBE0 894 aaKnown RBP18.91■□□□□ 0.62
ATG4D-207ENST00000587256 CC2D2BQ6DHV5 1058 aa18.91■□□□□ 0.62
ATG4D-207ENST00000587256 DNAAF4Q8WXU2 420 aa18.91■□□□□ 0.62
ATG4D-207ENST00000587256 CCDC88AQ3V6T2 1871 aa18.9■□□□□ 0.62
ATG4D-207ENST00000587256 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
ATG4D-207ENST00000587256 KDM2BQ8NHM5 1336 aa18.9■□□□□ 0.62
ATG4D-207ENST00000587256 NEURL1BA8MQ27 555 aa18.89■□□□□ 0.61
ATG4D-207ENST00000587256 GRAPQ13588 217 aa18.89■□□□□ 0.61
ATG4D-207ENST00000587256 GRAPLQ8TC17 118 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-207ENST00000587256 JARID2Q92833 1246 aaPredicted RBP18.89■□□□□ 0.61
ATG4D-207ENST00000587256 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
ATG4D-207ENST00000587256 SLC51AQ86UW1 340 aa18.88■□□□□ 0.61
ATG4D-207ENST00000587256 ZNF277Q9NRM2 450 aaPredicted RBP18.88■□□□□ 0.61
ATG4D-207ENST00000587256 SNED1Q8TER0 1413 aa18.88■□□□□ 0.61
ATG4D-207ENST00000587256 F6X3S4 739 aa18.87■□□□□ 0.61
ATG4D-207ENST00000587256 BBOX1O75936 387 aa18.87■□□□□ 0.61
ATG4D-207ENST00000587256 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
ATG4D-207ENST00000587256 LINS1Q8NG48 757 aa18.87■□□□□ 0.61
ATG4D-207ENST00000587256 PSMD1Q99460 953 aa18.87■□□□□ 0.61
ATG4D-207ENST00000587256 CDHR2Q9BYE9 1310 aa18.87■□□□□ 0.61
ATG4D-207ENST00000587256 DICER1Q9UPY3 1922 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms