RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 SDSP20132 328 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 KRI1Q8N9T8 703 aaKnown RBP11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 LRRC2Q9BYS8 371 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 CEP131Q9UPN4 1083 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 FILIP1Q7Z7B0 1213 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 OGFOD1Q8N543 542 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 NEK1Q96PY6 1258 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 CRNKL1Q9BZJ0 848 aaKnown RBP11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 PDE1AP54750 535 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 FAM89AQ96GI7 184 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 TFIP11Q9UBB9 837 aaKnown RBP11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 IARSP41252 1262 aaKnown RBP11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 NOM1Q5C9Z4 860 aaKnown RBP11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 KLHL10Q6JEL2 608 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 LGR6Q9HBX8 967 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 MYO1BO43795 1136 aa11.34□□□□□ -0.59
GPATCH8-205ENST00000587228 PRIM1P49642 420 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 HMGN5P82970 282 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 PICALMQ13492 652 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 TNIP1Q15025 636 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 NAA16Q6N069 864 aaPredicted RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 ZNF790Q6PG37 636 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 KAT14Q9H8E8 782 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 PZPP20742 1482 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 RIMBP2O15034 1052 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 RLBP1P12271 317 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 FAM177A1Q8N128 213 aaPredicted RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 NCOA7Q8NI08 942 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 BRF1Q92994 677 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 SCLT1Q96NL6 688 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 CUL5Q93034 780 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 UBA5Q9GZZ9 404 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 DDX21Q9NR30 783 aaKnown RBP eCLIP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 SEPT11Q9NVA2 429 aaKnown RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 ORC3Q9UBD5 711 aaPredicted RBP11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 SLC4A4Q9Y6R1 1079 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 GRM1Q13255 1194 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 NBPF14Q5TI25 921 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 G2E3Q7L622 706 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 RUFY1Q96T51 708 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
GPATCH8-205ENST00000587228 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 TRAPPC3LQ5T215 181 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 PANK2Q9BZ23 570 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 SYCE3A1L190 88 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 A1BGP04217 495 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 NUCB1Q02818 461 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 TBC1D2Q9BYX2 928 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 SCAND2PQ9GZW5 306 aaPredicted RBP11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 TMEM2Q9UHN6 1383 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 HDAC1Q13547 482 aaPredicted RBP11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 MAP3K11Q16584 847 aa11.32□□□□□ -0.6
GPATCH8-205ENST00000587228 PLEKHH1Q9ULM0 1364 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 HCLS1P14317 486 aaPredicted RBP11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 SSFA2P28290 1259 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 POLD1P28340 1107 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 KIF5BP33176 963 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 METAP2P50579 478 aaKnown RBP eCLIP11.31□□□□□ -0.61e-8■■□□□ 13.6
GPATCH8-205ENST00000587228 SLC26A6Q9BXS9 759 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 YEATS2Q9ULM3 1422 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 IL13P35225 146 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 GSTO1P78417 241 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 VEZTQ9HBM0 779 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 ZFYP08048 801 aaPredicted RBP11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 HSP90AA2PQ14568 343 aaPredicted RBP11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
GPATCH8-205ENST00000587228 KLF18A0A0U1RQI7 1052 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 MCM5P33992 734 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 MIGA1Q8NAN2 632 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 GJB2P29033 226 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 CFAP100Q494V2 611 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 TSPY3P0CV98 308 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 TSPY8P0CW00 308 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 TNNT3P45378 269 aaPredicted RBP11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 TFCP2Q12800 502 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 WTAPQ15007 396 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 RAB34Q9BZG1 259 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 HDAC9Q9UKV0 1011 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 BICC1Q9H694 974 aaKnown RBP11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 ARGLU1Q9NWB6 273 aaPredicted RBP11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 RBM8AQ9Y5S9 174 aaKnown RBP11.3□□□□□ -0.6
GPATCH8-205ENST00000587228 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
GPATCH8-205ENST00000587228 SKIDA1Q1XH10 827 aa11.29□□□□□ -0.6
GPATCH8-205ENST00000587228 ZNF804AQ7Z570 1209 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms