RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 CACNA1SQ13698 1873 aa17.1■□□□□ 0.33
SMARCA4-210ENST00000586892 NPR1P16066 1061 aa17.09■□□□□ 0.33
SMARCA4-210ENST00000586892 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
SMARCA4-210ENST00000586892 E9PSI1 815 aa17.08■□□□□ 0.32
SMARCA4-210ENST00000586892 VAMP4O75379 141 aa17.08■□□□□ 0.32
SMARCA4-210ENST00000586892 CRY2Q49AN0 593 aa17.08■□□□□ 0.32
SMARCA4-210ENST00000586892 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
SMARCA4-210ENST00000586892 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
SMARCA4-210ENST00000586892 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-210ENST00000586892 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
SMARCA4-210ENST00000586892 TRMT112Q9UI30 125 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-210ENST00000586892 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
SMARCA4-210ENST00000586892 PRPF40BQ6NWY9 871 aaKnown RBP17.06■□□□□ 0.32
SMARCA4-210ENST00000586892 ADCY9O60503 1353 aa17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 ALDH1B1P30837 517 aa17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 ZNF784Q8NCA9 323 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 SBF1O95248 1867 aa17.05■□□□□ 0.32
SMARCA4-210ENST00000586892 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
SMARCA4-210ENST00000586892 C21orf2O43822 256 aa17.04■□□□□ 0.32
SMARCA4-210ENST00000586892 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
SMARCA4-210ENST00000586892 RPGRQ92834 1020 aaKnown RBP17.04■□□□□ 0.32
SMARCA4-210ENST00000586892 METTL22Q9BUU2 404 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-210ENST00000586892 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 LAMB2P55268 1798 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 HOXA10P31260 410 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 FLIIQ13045 1269 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 MYD88Q99836 296 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
SMARCA4-210ENST00000586892 DDX60Q8IY21 1712 aaKnown RBP17.02■□□□□ 0.32
SMARCA4-210ENST00000586892 G2E3Q7L622 706 aa17.02■□□□□ 0.32
SMARCA4-210ENST00000586892 CCDC191Q8NCU4 936 aa17.02■□□□□ 0.32
SMARCA4-210ENST00000586892 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
SMARCA4-210ENST00000586892 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
SMARCA4-210ENST00000586892 FAM89AQ96GI7 184 aa17.01■□□□□ 0.31
SMARCA4-210ENST00000586892 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-210ENST00000586892 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-210ENST00000586892 NFKBIEO00221 500 aa17■□□□□ 0.31
SMARCA4-210ENST00000586892 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
SMARCA4-210ENST00000586892 RASSF7Q02833 373 aa17■□□□□ 0.31
SMARCA4-210ENST00000586892 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
SMARCA4-210ENST00000586892 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
SMARCA4-210ENST00000586892 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
SMARCA4-210ENST00000586892 C3orf67Q6ZVT6 689 aa17■□□□□ 0.31
SMARCA4-210ENST00000586892 SYNE4Q8N205 404 aa17■□□□□ 0.31
SMARCA4-210ENST00000586892 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
SMARCA4-210ENST00000586892 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
SMARCA4-210ENST00000586892 CWC25Q9NXE8 425 aaPredicted RBP17■□□□□ 0.31
SMARCA4-210ENST00000586892 LTBP3Q9NS15 1303 aa16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 LMNB1P20700 586 aa16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 CCDC93Q567U6 631 aa16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 ZNF428Q96B54 188 aa16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
SMARCA4-210ENST00000586892 TAOK3Q9H2K8 898 aa16.98■□□□□ 0.31
SMARCA4-210ENST00000586892 ZC3H4Q9UPT8 1303 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 IRS4O14654 1257 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 IGKV5-2P06315 115 aa16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 RTL5Q5HYW3 569 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 RTKN2Q8IZC4 609 aa16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-210ENST00000586892 GRIPAP1Q4V328 841 aa16.96■□□□□ 0.31
SMARCA4-210ENST00000586892 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-210ENST00000586892 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.3
SMARCA4-210ENST00000586892 ABCC4O15439 1325 aa16.96■□□□□ 0.3
SMARCA4-210ENST00000586892 NEURL1BA8MQ27 555 aa16.95■□□□□ 0.3
SMARCA4-210ENST00000586892 PPEF1O14829 653 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-210ENST00000586892 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-210ENST00000586892 PRELPP51888 382 aa16.95■□□□□ 0.3
SMARCA4-210ENST00000586892 SF3B3Q15393 1217 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-210ENST00000586892 CWF19L2Q2TBE0 894 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-210ENST00000586892 BBOX1O75936 387 aa16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 OLFM4Q6UX06 510 aa16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 LINS1Q8NG48 757 aa16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 MYH3P11055 1940 aa16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 CDHR2Q9BYE9 1310 aa16.94■□□□□ 0.3
SMARCA4-210ENST00000586892 PDE8AO60658 829 aa16.93■□□□□ 0.3
SMARCA4-210ENST00000586892 GRAPQ13588 217 aa16.93■□□□□ 0.3
SMARCA4-210ENST00000586892 GRAPLQ8TC17 118 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-210ENST00000586892 TAF1P21675 1872 aa16.93■□□□□ 0.3
SMARCA4-210ENST00000586892 GCKRQ14397 625 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms