RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 COBLO75128 1261 aa8.56□□□□□ -1.04
ZNF540-204ENST00000586792 GTF2IP78347 998 aa8.56□□□□□ -1.04
ZNF540-204ENST00000586792 TBC1D8BQ0IIM8 1120 aa8.56□□□□□ -1.04
ZNF540-204ENST00000586792 DTWD1Q8N5C7 304 aa8.56□□□□□ -1.04
ZNF540-204ENST00000586792 NUDT8Q8WV74 236 aa8.56□□□□□ -1.04
ZNF540-204ENST00000586792 PCMTD2Q9NV79 361 aa8.56□□□□□ -1.04
ZNF540-204ENST00000586792 SMARCA4P51532 1647 aa8.55□□□□□ -1.04
ZNF540-204ENST00000586792 AFF1P51825 1210 aaKnown RBP8.55□□□□□ -1.04
ZNF540-204ENST00000586792 EPHA4P54764 986 aa8.55□□□□□ -1.04
ZNF540-204ENST00000586792 DMRTC2Q8IXT2 367 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-204ENST00000586792 IGFLR1Q9H665 355 aa8.55□□□□□ -1.04
ZNF540-204ENST00000586792 BAZ1AQ9NRL2 1556 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-204ENST00000586792 RGS9O75916 674 aaPredicted RBP8.54□□□□□ -1.04
ZNF540-204ENST00000586792 WFDC12Q8WWY7 111 aa8.54□□□□□ -1.04
ZNF540-204ENST00000586792 TYRO3Q06418 890 aa8.53□□□□□ -1.04
ZNF540-204ENST00000586792 PSAPL1Q6NUJ1 521 aa8.53□□□□□ -1.04
ZNF540-204ENST00000586792 SMARCA2P51531 1590 aa8.52□□□□□ -1.04
ZNF540-204ENST00000586792 HIRAP54198 1017 aaPredicted RBP8.52□□□□□ -1.05
ZNF540-204ENST00000586792 PSMA6P60900 246 aaKnown RBP8.52□□□□□ -1.05
ZNF540-204ENST00000586792 PCSK7Q16549 785 aa8.52□□□□□ -1.05
ZNF540-204ENST00000586792 HIF1AQ16665 826 aa8.52□□□□□ -1.05
ZNF540-204ENST00000586792 TBCELQ5QJ74 424 aa8.52□□□□□ -1.05
ZNF540-204ENST00000586792 ILDR2Q71H61 639 aa8.52□□□□□ -1.05
ZNF540-204ENST00000586792 TNS4Q8IZW8 715 aa8.52□□□□□ -1.05
ZNF540-204ENST00000586792 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.05
ZNF540-204ENST00000586792 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
ZNF540-204ENST00000586792 MSL1Q68DK7 614 aa8.51□□□□□ -1.05
ZNF540-204ENST00000586792 IGF2-ASQ6U949 168 aa8.51□□□□□ -1.05
ZNF540-204ENST00000586792 FBXO11Q86XK2 927 aa8.51□□□□□ -1.05
ZNF540-204ENST00000586792 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
ZNF540-204ENST00000586792 SUSD3Q96L08 255 aa8.51□□□□□ -1.05
ZNF540-204ENST00000586792 SKIP12755 728 aa8.5□□□□□ -1.05
ZNF540-204ENST00000586792 ABL2P42684 1182 aa8.5□□□□□ -1.05
ZNF540-204ENST00000586792 SH3PXD2AQ5TCZ1 1133 aa8.5□□□□□ -1.05
ZNF540-204ENST00000586792 PRR23CQ6ZRP0 262 aa8.5□□□□□ -1.05
ZNF540-204ENST00000586792 PNMA5Q96PV4 448 aa8.5□□□□□ -1.05
ZNF540-204ENST00000586792 PHACTR1Q9C0D0 580 aa8.5□□□□□ -1.05
ZNF540-204ENST00000586792 DNAJB12Q9NXW2 375 aaKnown RBP8.5□□□□□ -1.05
ZNF540-204ENST00000586792 NOS3P29474 1203 aa8.49□□□□□ -1.05
ZNF540-204ENST00000586792 IRAK1P51617 712 aa8.49□□□□□ -1.05
ZNF540-204ENST00000586792 NFATC2IPQ8NCF5 419 aa8.49□□□□□ -1.05
ZNF540-204ENST00000586792 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
ZNF540-204ENST00000586792 HCN4Q9Y3Q4 1203 aa8.49□□□□□ -1.05
ZNF540-204ENST00000586792 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
ZNF540-204ENST00000586792 NCAPD3P42695 1498 aa8.48□□□□□ -1.05
ZNF540-204ENST00000586792 ATAD2BQ9ULI0 1458 aa8.48□□□□□ -1.05
ZNF540-204ENST00000586792 HMGXB3Q12766 1538 aa8.48□□□□□ -1.05
ZNF540-204ENST00000586792 PIK3CDO00329 1044 aa8.47□□□□□ -1.05
ZNF540-204ENST00000586792 POTEAQ6S8J7 498 aa8.47□□□□□ -1.05
ZNF540-204ENST00000586792 BTLAQ7Z6A9 289 aa8.47□□□□□ -1.05
ZNF540-204ENST00000586792 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
ZNF540-204ENST00000586792 BAZ1BQ9UIG0 1483 aaKnown RBP8.46□□□□□ -1.05
ZNF540-204ENST00000586792 NCOA4Q13772 614 aa8.46□□□□□ -1.06
ZNF540-204ENST00000586792 FRRS1LQ9P0K9 344 aa8.46□□□□□ -1.06
ZNF540-204ENST00000586792 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.46□□□□□ -1.06
ZNF540-204ENST00000586792 FSTP19883 344 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 SSTR4P31391 388 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 CCINQ13939 588 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 FAM35AQ86V20 835 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 WFDC8Q8IUA0 241 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 NAGPAQ9UK23 515 aa8.45□□□□□ -1.06
ZNF540-204ENST00000586792 MROH2BQ7Z745 1585 aa8.44□□□□□ -1.06
ZNF540-204ENST00000586792 PEG3Q9GZU2 1588 aa8.44□□□□□ -1.06
ZNF540-204ENST00000586792 ATP1A2P50993 1020 aa8.44□□□□□ -1.06
ZNF540-204ENST00000586792 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
ZNF540-204ENST00000586792 CD97P48960 835 aa8.43□□□□□ -1.06
ZNF540-204ENST00000586792 TTC9Q92623 222 aa8.43□□□□□ -1.06
ZNF540-204ENST00000586792 M0R2N6 131 aa8.42□□□□□ -1.06
ZNF540-204ENST00000586792 GSC2O15499 205 aa8.42□□□□□ -1.06
ZNF540-204ENST00000586792 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
ZNF540-204ENST00000586792 DZIP1LQ8IYY4 767 aaKnown RBP8.42□□□□□ -1.06
ZNF540-204ENST00000586792 ALDH16A1Q8IZ83 802 aa8.42□□□□□ -1.06
ZNF540-204ENST00000586792 TPCN2Q8NHX9 752 aa8.42□□□□□ -1.06
ZNF540-204ENST00000586792 CPB1P15086 417 aa8.41□□□□□ -1.06
ZNF540-204ENST00000586792 NFKB1P19838 968 aa8.41□□□□□ -1.06
ZNF540-204ENST00000586792 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
ZNF540-204ENST00000586792 CCDC102BQ68D86 513 aa8.41□□□□□ -1.06
ZNF540-204ENST00000586792 ELMSAN1Q6PJG2 1045 aa8.41□□□□□ -1.06
ZNF540-204ENST00000586792 AKTIPQ9H8T0 292 aa8.41□□□□□ -1.06
ZNF540-204ENST00000586792 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
ZNF540-204ENST00000586792 EPB42P16452 691 aa8.4□□□□□ -1.06
ZNF540-204ENST00000586792 TAL1P17542 331 aaPredicted RBP8.4□□□□□ -1.06
ZNF540-204ENST00000586792 GRIK5Q16478 980 aa8.4□□□□□ -1.06
ZNF540-204ENST00000586792 IER5Q5VY09 327 aa8.4□□□□□ -1.06
ZNF540-204ENST00000586792 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
ZNF540-204ENST00000586792 ARID1BQ8NFD5 2236 aaPredicted RBP8.39□□□□□ -1.07
ZNF540-204ENST00000586792 USP17L5A8MUK1 530 aa8.39□□□□□ -1.07
ZNF540-204ENST00000586792 ZBTB7BO15156 539 aaPredicted RBP8.39□□□□□ -1.07
ZNF540-204ENST00000586792 MAP3K6O95382 1288 aa8.39□□□□□ -1.07
ZNF540-204ENST00000586792 TMEM130Q8N3G9 435 aa8.39□□□□□ -1.07
ZNF540-204ENST00000586792 STAG2Q8N3U4 1231 aa8.39□□□□□ -1.07
ZNF540-204ENST00000586792 DCAF11Q8TEB1 546 aa8.39□□□□□ -1.07
ZNF540-204ENST00000586792 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
ZNF540-204ENST00000586792 RNF114Q9Y508 228 aa8.39□□□□□ -1.07
ZNF540-204ENST00000586792 ARID4AP29374 1257 aaPredicted RBP8.38□□□□□ -1.07
ZNF540-204ENST00000586792 DEPDC4Q8N2C3 294 aa8.38□□□□□ -1.07
ZNF540-204ENST00000586792 GAS2L2Q8NHY3 880 aa8.38□□□□□ -1.07
ZNF540-204ENST00000586792 BCANQ96GW7 911 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms