RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 KDRP35968 1356 aa11.99□□□□□ -0.49
ZNF540-203ENST00000586134 RAB3GAP1Q15042 981 aa11.98□□□□□ -0.49
ZNF540-203ENST00000586134 SMARCC1Q92922 1105 aaPredicted RBP11.98□□□□□ -0.49
ZNF540-203ENST00000586134 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
ZNF540-203ENST00000586134 PSMD1Q99460 953 aa11.98□□□□□ -0.49
ZNF540-203ENST00000586134 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
ZNF540-203ENST00000586134 IFNL2Q8IZJ0 200 aa11.98□□□□□ -0.49
ZNF540-203ENST00000586134 SPTLC3Q9NUV7 552 aa11.98□□□□□ -0.49
ZNF540-203ENST00000586134 MAP3K5Q99683 1374 aa11.97□□□□□ -0.49
ZNF540-203ENST00000586134 REC8O95072 547 aa11.97□□□□□ -0.49
ZNF540-203ENST00000586134 SEC24BO95487 1268 aa11.97□□□□□ -0.49
ZNF540-203ENST00000586134 RAD51AP2Q09MP3 1159 aa11.97□□□□□ -0.49
ZNF540-203ENST00000586134 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
ZNF540-203ENST00000586134 HSCBQ8IWL3 235 aa11.97□□□□□ -0.49
ZNF540-203ENST00000586134 SYTL4Q96C24 671 aaPredicted RBP11.97□□□□□ -0.49
ZNF540-203ENST00000586134 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
ZNF540-203ENST00000586134 IRF6O14896 467 aa11.96□□□□□ -0.49
ZNF540-203ENST00000586134 PTGER2P43116 358 aa11.96□□□□□ -0.49
ZNF540-203ENST00000586134 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
ZNF540-203ENST00000586134 MUM1L1Q5H9M0 696 aa11.96□□□□□ -0.49
ZNF540-203ENST00000586134 SMC5Q8IY18 1101 aa11.96□□□□□ -0.49
ZNF540-203ENST00000586134 PHKG2P15735 406 aa11.96□□□□□ -0.5
ZNF540-203ENST00000586134 CASQ1P31415 396 aa11.96□□□□□ -0.5
ZNF540-203ENST00000586134 NOLC1Q14978 699 aaKnown RBP eCLIP11.96□□□□□ -0.5
ZNF540-203ENST00000586134 ZNF827Q17R98 1081 aa11.96□□□□□ -0.5
ZNF540-203ENST00000586134 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.5
ZNF540-203ENST00000586134 EP400NLQ6ZTU2 488 aa11.96□□□□□ -0.5
ZNF540-203ENST00000586134 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.5
ZNF540-203ENST00000586134 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 SCN11AQ9UI33 1791 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 PALLDQ8WX93 1383 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 C4BP0C0L5 1744 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 PLIN1O60240 522 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 ZNF853P0CG23 659 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 CYP2C19P33261 490 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 ZKSCAN8Q15776 578 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-203ENST00000586134 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 GOLGA6L1Q8N7Z2 621 aa11.95□□□□□ -0.5
ZNF540-203ENST00000586134 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-203ENST00000586134 CCNL1Q9UK58 526 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-203ENST00000586134 SEMA3FQ13275 785 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 OS9Q13438 667 aaPredicted RBP11.94□□□□□ -0.5
ZNF540-203ENST00000586134 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
ZNF540-203ENST00000586134 TSC1Q92574 1164 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 IL13P35225 146 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 TDO2P48775 406 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 CCDC91Q7Z6B0 441 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 RNF217Q8TC41 542 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 SNX21Q969T3 373 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 PNPLA7Q6ZV29 1317 aa11.94□□□□□ -0.5
ZNF540-203ENST00000586134 ADAMTS7Q9UKP4 1686 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 HNRNPH2P55795 449 aaKnown RBP11.93□□□□□ -0.5
ZNF540-203ENST00000586134 PDGFDQ9GZP0 370 aaPredicted RBP11.93□□□□□ -0.5
ZNF540-203ENST00000586134 KIF3CO14782 793 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 ZBTB7AO95365 584 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 TRDNQ13061 729 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 RPAINQ86UA6 219 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 PIGBQ92521 554 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 DCAF5Q96JK2 942 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 RBSNQ9H1K0 784 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 FAM53CQ9NYF3 392 aa11.93□□□□□ -0.5
ZNF540-203ENST00000586134 DDX49Q9Y6V7 483 aaKnown RBP11.93□□□□□ -0.5
ZNF540-203ENST00000586134 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
ZNF540-203ENST00000586134 NBPF5PQ86XG9 351 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-203ENST00000586134 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
ZNF540-203ENST00000586134 COL5A3P25940 1745 aaPredicted RBP11.92□□□□□ -0.5
ZNF540-203ENST00000586134 KIF18AQ8NI77 898 aa11.91□□□□□ -0.5
ZNF540-203ENST00000586134 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
ZNF540-203ENST00000586134 TFCP2L1Q9NZI6 479 aa11.91□□□□□ -0.5
ZNF540-203ENST00000586134 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
ZNF540-203ENST00000586134 PPP1R12AO14974 1030 aaPredicted RBP11.91□□□□□ -0.5
ZNF540-203ENST00000586134 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
ZNF540-203ENST00000586134 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
ZNF540-203ENST00000586134 MTHFSP49914 203 aa11.9□□□□□ -0.5
ZNF540-203ENST00000586134 GSCP56915 257 aaPredicted RBP11.9□□□□□ -0.5
ZNF540-203ENST00000586134 ZSCAN23Q3MJ62 389 aa11.9□□□□□ -0.5
ZNF540-203ENST00000586134 OTUD6BQ8N6M0 293 aa11.9□□□□□ -0.5
ZNF540-203ENST00000586134 GPATCH11Q8N954 259 aa11.9□□□□□ -0.5
ZNF540-203ENST00000586134 CXorf56Q9H5V9 222 aa11.9□□□□□ -0.5
ZNF540-203ENST00000586134 ATF5Q9Y2D1 282 aaPredicted RBP11.9□□□□□ -0.5
ZNF540-203ENST00000586134 MYBBP1AQ9BQG0 1328 aaKnown RBP11.9□□□□□ -0.5
ZNF540-203ENST00000586134 KDM6AO15550 1401 aaPredicted RBP11.9□□□□□ -0.5
ZNF540-203ENST00000586134 ERICH4A6NGS2 130 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 SPRYD3Q8NCJ5 442 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 JRKLQ9Y4A0 524 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 CHD4Q14839 1912 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 MRC1P22897 1456 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 POLD1P28340 1107 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 SWT1Q5T5J6 900 aaKnown RBP11.89□□□□□ -0.51
ZNF540-203ENST00000586134 SULT6B1Q6IMI4 303 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
ZNF540-203ENST00000586134 TXLNBQ8N3L3 684 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 SGSM3Q96HU1 749 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 DEF6Q9H4E7 631 aa11.89□□□□□ -0.51
ZNF540-203ENST00000586134 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
ZNF540-203ENST00000586134 A0A1B0GUL7 405 aa11.88□□□□□ -0.51
ZNF540-203ENST00000586134 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
ZNF540-203ENST00000586134 SIK1P57059 783 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms