RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 SLX4Q8IY92 1834 aa13.78□□□□□ -0.2
SAFB2-202ENST00000585449 LMNB1P20700 586 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 ALDH1B1P30837 517 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 C1QTNF8P60827 252 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 IL16Q14005 1332 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 CRY2Q49AN0 593 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 SLC10A5Q5PT55 438 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 WDR63Q8IWG1 891 aa13.77□□□□□ -0.21
SAFB2-202ENST00000585449 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
SAFB2-202ENST00000585449 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
SAFB2-202ENST00000585449 HCLS1P14317 486 aaPredicted RBP13.76□□□□□ -0.21
SAFB2-202ENST00000585449 TWISTNBQ3B726 338 aaPredicted RBP13.76□□□□□ -0.21
SAFB2-202ENST00000585449 RIC3Q7Z5B4 369 aa13.76□□□□□ -0.21
SAFB2-202ENST00000585449 NLRP3Q96P20 1036 aa13.76□□□□□ -0.21
SAFB2-202ENST00000585449 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
SAFB2-202ENST00000585449 TRMT112Q9UI30 125 aaKnown RBP13.76□□□□□ -0.21
SAFB2-202ENST00000585449 KIF3CO14782 793 aa13.75□□□□□ -0.21
SAFB2-202ENST00000585449 RPGRQ92834 1020 aaKnown RBP13.75□□□□□ -0.21
SAFB2-202ENST00000585449 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
SAFB2-202ENST00000585449 SBF1O95248 1867 aa13.75□□□□□ -0.21
SAFB2-202ENST00000585449 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
SAFB2-202ENST00000585449 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
SAFB2-202ENST00000585449 HOXA10P31260 410 aaPredicted RBP13.74□□□□□ -0.21
SAFB2-202ENST00000585449 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
SAFB2-202ENST00000585449 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
SAFB2-202ENST00000585449 RTL5Q5HYW3 569 aaPredicted RBP13.74□□□□□ -0.21
SAFB2-202ENST00000585449 SLC51AQ86UW1 340 aa13.74□□□□□ -0.21
SAFB2-202ENST00000585449 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
SAFB2-202ENST00000585449 TAOK3Q9H2K8 898 aa13.74□□□□□ -0.21
SAFB2-202ENST00000585449 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 CCDC93Q567U6 631 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 SOGA3Q5TF21 947 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 G2E3Q7L622 706 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 FAM89AQ96GI7 184 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 MYD88Q99836 296 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 CACNA1SQ13698 1873 aa13.73□□□□□ -0.21
SAFB2-202ENST00000585449 VAMP4O75379 141 aa13.72□□□□□ -0.21
SAFB2-202ENST00000585449 SLC4A2P04920 1241 aa13.72□□□□□ -0.21
SAFB2-202ENST00000585449 CRAMP1Q96RY5 1269 aa13.72□□□□□ -0.21
SAFB2-202ENST00000585449 STK31Q9BXU1 1019 aa13.72□□□□□ -0.21
SAFB2-202ENST00000585449 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
SAFB2-202ENST00000585449 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
SAFB2-202ENST00000585449 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.21
SAFB2-202ENST00000585449 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
SAFB2-202ENST00000585449 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
SAFB2-202ENST00000585449 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
SAFB2-202ENST00000585449 RTKN2Q8IZC4 609 aa13.71□□□□□ -0.21
SAFB2-202ENST00000585449 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.21
SAFB2-202ENST00000585449 ZNF277Q9NRM2 450 aaPredicted RBP13.71□□□□□ -0.21
SAFB2-202ENST00000585449 MAP3K2Q9Y2U5 619 aa13.71□□□□□ -0.21
SAFB2-202ENST00000585449 CCDC88AQ3V6T2 1871 aa13.71□□□□□ -0.21
SAFB2-202ENST00000585449 KDM2BQ8NHM5 1336 aa13.7□□□□□ -0.22
SAFB2-202ENST00000585449 FER1L6Q2WGJ9 1857 aa13.7□□□□□ -0.22
SAFB2-202ENST00000585449 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
SAFB2-202ENST00000585449 GLTPD2A6NH11 291 aa13.7□□□□□ -0.22
SAFB2-202ENST00000585449 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
SAFB2-202ENST00000585449 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
SAFB2-202ENST00000585449 KSR2Q6VAB6 950 aa13.7□□□□□ -0.22
SAFB2-202ENST00000585449 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
SAFB2-202ENST00000585449 METTL22Q9BUU2 404 aaPredicted RBP13.7□□□□□ -0.22
SAFB2-202ENST00000585449 ABCC4O15439 1325 aa13.69□□□□□ -0.22
SAFB2-202ENST00000585449 ANKRD36CQ5JPF3 1778 aa13.69□□□□□ -0.22
SAFB2-202ENST00000585449 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
SAFB2-202ENST00000585449 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
SAFB2-202ENST00000585449 ZC3H4Q9UPT8 1303 aaKnown RBP13.68□□□□□ -0.22
SAFB2-202ENST00000585449 CCER2I3L3R5 266 aa13.68□□□□□ -0.22
SAFB2-202ENST00000585449 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
SAFB2-202ENST00000585449 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
SAFB2-202ENST00000585449 ZBTB38Q8NAP3 1195 aaPredicted RBP13.68□□□□□ -0.22
SAFB2-202ENST00000585449 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
SAFB2-202ENST00000585449 MYH16Q9H6N6 1097 aa13.68□□□□□ -0.22
SAFB2-202ENST00000585449 BBOX1O75936 387 aa13.67□□□□□ -0.22
SAFB2-202ENST00000585449 TOMM70O94826 608 aa13.67□□□□□ -0.22
SAFB2-202ENST00000585449 DDNO94850 711 aaPredicted RBP13.67□□□□□ -0.22
SAFB2-202ENST00000585449 IGKV5-2P06315 115 aa13.67□□□□□ -0.22
SAFB2-202ENST00000585449 IARSP41252 1262 aaKnown RBP13.67□□□□□ -0.22
SAFB2-202ENST00000585449 SF3B3Q15393 1217 aaKnown RBP13.67□□□□□ -0.22
SAFB2-202ENST00000585449 CC2D2BQ6DHV5 1058 aa13.67□□□□□ -0.22
SAFB2-202ENST00000585449 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
SAFB2-202ENST00000585449 CWC25Q9NXE8 425 aaPredicted RBP13.67□□□□□ -0.22
SAFB2-202ENST00000585449 ATP6V0A2Q9Y487 856 aa13.67□□□□□ -0.22
SAFB2-202ENST00000585449 SNED1Q8TER0 1413 aa13.66□□□□□ -0.22
SAFB2-202ENST00000585449 POTECB2RU33 542 aa13.66□□□□□ -0.22
SAFB2-202ENST00000585449 FLIIQ13045 1269 aa13.66□□□□□ -0.22
SAFB2-202ENST00000585449 GRAPQ13588 217 aa13.66□□□□□ -0.22
SAFB2-202ENST00000585449 CWF19L2Q2TBE0 894 aaKnown RBP13.66□□□□□ -0.22
SAFB2-202ENST00000585449 SP8Q8IXZ3 490 aa13.66□□□□□ -0.22
SAFB2-202ENST00000585449 GRAPLQ8TC17 118 aaPredicted RBP13.66□□□□□ -0.22
SAFB2-202ENST00000585449 PSMD1Q99460 953 aa13.66□□□□□ -0.22
SAFB2-202ENST00000585449 PCCAP05165 728 aaPredicted RBP13.65□□□□□ -0.22
SAFB2-202ENST00000585449 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
SAFB2-202ENST00000585449 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
SAFB2-202ENST00000585449 CELF1Q92879 486 aaKnown RBP13.65□□□□□ -0.22
SAFB2-202ENST00000585449 LAMB2P55268 1798 aa13.64□□□□□ -0.23
SAFB2-202ENST00000585449 VEGFAP15692 232 aaPredicted RBP13.64□□□□□ -0.23
SAFB2-202ENST00000585449 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
SAFB2-202ENST00000585449 DIEXFQ68CQ4 756 aaKnown RBP13.64□□□□□ -0.23
SAFB2-202ENST00000585449 MIER1Q8N108 512 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms