RNA–Protein interactions for RNA: ENST00000585352.5

ZNF559-203, Transcript of zinc finger protein 559, humanhuman

TSL 1 (best) BASIC

Gene ZNF559, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-203ENST00000585352 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
ZNF559-203ENST00000585352 VAMP4O75379 141 aa11.29□□□□□ -0.6
ZNF559-203ENST00000585352 SNRPA1P09661 255 aaKnown RBP11.29□□□□□ -0.6
ZNF559-203ENST00000585352 COL9A1P20849 921 aa11.29□□□□□ -0.6
ZNF559-203ENST00000585352 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
ZNF559-203ENST00000585352 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
ZNF559-203ENST00000585352 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
ZNF559-203ENST00000585352 SSH1Q8WYL5 1049 aa11.29□□□□□ -0.6
ZNF559-203ENST00000585352 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
ZNF559-203ENST00000585352 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 C5P01031 1676 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 BCAR3O75815 825 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 HMGB2P26583 209 aaKnown RBP11.28□□□□□ -0.6
ZNF559-203ENST00000585352 PDE3AQ14432 1141 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 TSPYL6Q8N831 410 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 TEX13AQ9BXU3 409 aaPredicted RBP11.28□□□□□ -0.6
ZNF559-203ENST00000585352 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 KCPQ6ZWJ8 1503 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 ERBB4Q15303 1308 aa11.28□□□□□ -0.6
ZNF559-203ENST00000585352 DDX58O95786 925 aaKnown RBP11.27□□□□□ -0.61
ZNF559-203ENST00000585352 EIF2S2P20042 333 aaKnown RBP11.27□□□□□ -0.61
ZNF559-203ENST00000585352 RXRBP28702 533 aa11.27□□□□□ -0.61
ZNF559-203ENST00000585352 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
ZNF559-203ENST00000585352 SLC39A6Q13433 755 aa11.27□□□□□ -0.61
ZNF559-203ENST00000585352 C6orf132Q5T0Z8 1188 aa11.27□□□□□ -0.61
ZNF559-203ENST00000585352 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
ZNF559-203ENST00000585352 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
ZNF559-203ENST00000585352 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.61
ZNF559-203ENST00000585352 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
ZNF559-203ENST00000585352 GIGYF1O75420 1035 aaPredicted RBP11.26□□□□□ -0.61
ZNF559-203ENST00000585352 IRX6P78412 446 aaPredicted RBP11.26□□□□□ -0.61
ZNF559-203ENST00000585352 AAMPQ13685 434 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 THSD4Q6ZMP0 1018 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 KRT27Q7Z3Y8 459 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
ZNF559-203ENST00000585352 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
ZNF559-203ENST00000585352 WDR70Q9NW82 654 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 PALLDQ8WX93 1383 aa11.26□□□□□ -0.61
ZNF559-203ENST00000585352 GOLGA8CPA6NN73 597 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 PTCD1O75127 700 aaKnown RBP11.25□□□□□ -0.61
ZNF559-203ENST00000585352 STARD3NLO95772 234 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
ZNF559-203ENST00000585352 FKBP5Q13451 457 aaPredicted RBP11.25□□□□□ -0.61
ZNF559-203ENST00000585352 PROX2Q3B8N5 592 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 FAM196AQ6ZSG2 479 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 ITPRIPQ8IWB1 547 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 VSIG10Q8N0Z9 540 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 PIGBQ92521 554 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 NECTIN2Q92692 538 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 DDX12PQ92771 950 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 ACSBG1Q96GR2 724 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
ZNF559-203ENST00000585352 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
ZNF559-203ENST00000585352 BTAF1O14981 1849 aa11.24□□□□□ -0.61
ZNF559-203ENST00000585352 PLIN1O60240 522 aa11.24□□□□□ -0.61
ZNF559-203ENST00000585352 WNT2BQ93097 391 aa11.24□□□□□ -0.61
ZNF559-203ENST00000585352 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
ZNF559-203ENST00000585352 DDX19BQ9UMR2 479 aa11.24□□□□□ -0.61
ZNF559-203ENST00000585352 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
ZNF559-203ENST00000585352 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
ZNF559-203ENST00000585352 KCNQ3O43525 872 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 TRIM27P14373 513 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
ZNF559-203ENST00000585352 FLIIQ13045 1269 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 CHPF2Q9P2E5 772 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 RGS12O14924 1447 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 ZNF831Q5JPB2 1677 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
ZNF559-203ENST00000585352 ABCC4O15439 1325 aa11.22□□□□□ -0.61
ZNF559-203ENST00000585352 CLUAP1Q96AJ1 413 aa11.22□□□□□ -0.61
ZNF559-203ENST00000585352 DDX21Q9NR30 783 aaKnown RBP eCLIP11.22□□□□□ -0.61
ZNF559-203ENST00000585352 ATG3Q9NT62 314 aa11.22□□□□□ -0.61
ZNF559-203ENST00000585352 ASAP1Q9ULH1 1129 aa11.22□□□□□ -0.61
ZNF559-203ENST00000585352 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
ZNF559-203ENST00000585352 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
ZNF559-203ENST00000585352 NBR1Q14596 966 aa11.21□□□□□ -0.61
ZNF559-203ENST00000585352 MVPQ14764 893 aaKnown RBP11.21□□□□□ -0.61
ZNF559-203ENST00000585352 KIF6Q6ZMV9 814 aa11.21□□□□□ -0.61
ZNF559-203ENST00000585352 CRBNQ96SW2 442 aa11.21□□□□□ -0.61
ZNF559-203ENST00000585352 PPP4R2Q9NY27 417 aa11.21□□□□□ -0.61
ZNF559-203ENST00000585352 SBF2Q86WG5 1849 aa11.21□□□□□ -0.62
ZNF559-203ENST00000585352 TJP1Q07157 1748 aa11.21□□□□□ -0.62
ZNF559-203ENST00000585352 PTPN5P54829 565 aa11.2□□□□□ -0.62
ZNF559-203ENST00000585352 PANK1Q8TE04 598 aa11.2□□□□□ -0.62
ZNF559-203ENST00000585352 CCDC136Q96JN2 1154 aa11.2□□□□□ -0.62
ZNF559-203ENST00000585352 HDAC5Q9UQL6 1122 aa11.2□□□□□ -0.62
ZNF559-203ENST00000585352 LOC102724428A0A0B4J2F2 783 aa11.19□□□□□ -0.62
ZNF559-203ENST00000585352 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
ZNF559-203ENST00000585352 MYL6BP14649 208 aa11.19□□□□□ -0.62
ZNF559-203ENST00000585352 SIK1P57059 783 aa11.19□□□□□ -0.62
ZNF559-203ENST00000585352 SLC4A10Q6U841 1118 aa11.19□□□□□ -0.62
ZNF559-203ENST00000585352 COG6Q9Y2V7 657 aa11.19□□□□□ -0.62
ZNF559-203ENST00000585352 ZNF330Q9Y3S2 320 aaPredicted RBP11.19□□□□□ -0.62
ZNF559-203ENST00000585352 ATP6V1AP38606 617 aa11.18□□□□□ -0.62
ZNF559-203ENST00000585352 KIAA1468Q9P260 1216 aa11.18□□□□□ -0.62
ZNF559-203ENST00000585352 COL5A3P25940 1745 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms