RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 EHMT1Q9H9B1 1298 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 EBAG9O00559 213 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 TEX13AQ9BXU3 409 aaPredicted RBP8.4□□□□□ -1.06
CDH8-214ENST00000585315 JADE2Q9NQC1 790 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 TRMT1Q9NXH9 659 aaKnown RBP8.4□□□□□ -1.06
CDH8-214ENST00000585315 ORC3Q9UBD5 711 aaPredicted RBP8.4□□□□□ -1.06
CDH8-214ENST00000585315 FBXO3Q9UK99 471 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 NCOA7Q8NI08 942 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 CCDC77Q9BR77 488 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 IFIT3O14879 490 aaKnown RBP8.4□□□□□ -1.06
CDH8-214ENST00000585315 HSF2BPO75031 334 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 ACTN2P35609 894 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 UBASH3AP57075 661 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 RNF187Q5TA31 235 aaPredicted RBP8.4□□□□□ -1.06
CDH8-214ENST00000585315 TMX3Q96JJ7 454 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 KRT86O43790 486 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 TUBB2AQ13885 445 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 KIAA0753Q2KHM9 967 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 MRPS27Q92552 414 aaKnown RBP8.4□□□□□ -1.06
CDH8-214ENST00000585315 TUBB2BQ9BVA1 445 aa8.4□□□□□ -1.06
CDH8-214ENST00000585315 KRT83P78385 493 aa8.4□□□□□ -1.07
CDH8-214ENST00000585315 KDM4AO75164 1064 aa8.4□□□□□ -1.07
CDH8-214ENST00000585315 SSR1P43307 286 aaKnown RBP8.4□□□□□ -1.07
CDH8-214ENST00000585315 SOS1Q07889 1333 aaPredicted RBP8.39□□□□□ -1.07
CDH8-214ENST00000585315 IQGAP2Q13576 1575 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 NEBLO76041 1014 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 SLC5A1P13866 664 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 RRS1Q15050 365 aaKnown RBP8.39□□□□□ -1.07
CDH8-214ENST00000585315 TOPBP1Q92547 1522 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 CTAGE9A4FU28 777 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 GOLGA8AA7E2F4 631 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 SELENOOQ9BVL4 669 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 LDHCP07864 332 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 ANKLE2Q86XL3 938 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 SREK1Q8WXA9 508 aaKnown RBP8.39□□□□□ -1.07
CDH8-214ENST00000585315 PUS7Q96PZ0 661 aaKnown RBP8.39□□□□□ -1.07
CDH8-214ENST00000585315 USP16Q9Y5T5 823 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 NUP160Q12769 1436 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 DNMBPQ6XZF7 1577 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 PSMA7O14818 248 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 GNAQP50148 359 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 PDE4BQ07343 736 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 CNNM2Q9H8M5 875 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 CCDC94Q9BW85 323 aaPredicted RBP8.39□□□□□ -1.07
CDH8-214ENST00000585315 IKBKGQ9Y6K9 419 aa8.39□□□□□ -1.07
CDH8-214ENST00000585315 MAGI1Q96QZ7 1491 aaPredicted RBP8.39□□□□□ -1.07
CDH8-214ENST00000585315 ZMYND15Q9H091 742 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 GOLGA1Q92805 767 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 TACC1O75410 805 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 RAB3GAP1Q15042 981 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 ANKRD44Q8N8A2 993 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 LMBR1Q8WVP7 490 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 CUL5Q93034 780 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 CTNNA2P26232 953 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 CCDC40Q4G0X9 1142 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 ZNF444Q8N0Y2 327 aaPredicted RBP8.38□□□□□ -1.07
CDH8-214ENST00000585315 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 SPAG5Q96R06 1193 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 RASAL2Q9UJF2 1139 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 ATP2A1O14983 1001 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 METAP2P50579 478 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH8-214ENST00000585315 TTC41PQ6P2S7 1318 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 NLRP5P59047 1200 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 ERMNQ8TAM6 284 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 KIF14Q15058 1648 aa8.38□□□□□ -1.07
CDH8-214ENST00000585315 MAATS1Q7Z4T9 603 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 MINDY4BA8MYZ0 360 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 VAV2P52735 878 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 KIF5AQ12840 1032 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 MEX3CQ5U5Q3 659 aaKnown RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 TMCO5BA8MYB1 307 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 PPP1R2P41236 205 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 MCM10Q7L590 875 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 KRT23Q9C075 422 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 FAM177BA6PVY3 158 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 USP5P45974 858 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDH8-214ENST00000585315 KIF4AO95239 1232 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 MFSD6Q6ZSS7 791 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 ZSCAN29Q8IWY8 852 aaPredicted RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 BAG3O95817 575 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 GOPCQ9HD26 462 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 DNAI1Q9UI46 699 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 ASXL1Q8IXJ9 1541 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 UQCRFS1P1P0C7P4 283 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 NOP2P46087 812 aaKnown RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 PDE1AP54750 535 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 CCDC186Q7Z3E2 898 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 DZIP1Q86YF9 867 aaKnown RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 TTC12Q9H892 705 aaPredicted RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 RAD50Q92878 1312 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 SPTY2D1Q68D10 685 aaPredicted RBP8.37□□□□□ -1.07
CDH8-214ENST00000585315 BRAPQ7Z569 592 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 TRIM47Q96LD4 638 aa8.37□□□□□ -1.07
CDH8-214ENST00000585315 ALDH1L1O75891 902 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms