RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 RTKN2Q8IZC4 609 aa23.16■■□□□ 1.3
SRSF1-209ENST00000585096 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
SRSF1-209ENST00000585096 RRAGCQ9HB90 399 aa23.16■■□□□ 1.3
SRSF1-209ENST00000585096 HOXA10P31260 410 aaPredicted RBP23.15■■□□□ 1.3
SRSF1-209ENST00000585096 DPY19L2Q6NUT2 758 aa23.15■■□□□ 1.3
SRSF1-209ENST00000585096 ANKRD13DQ6ZTN6 518 aa23.15■■□□□ 1.3
SRSF1-209ENST00000585096 PLBD2Q8NHP8 589 aa23.15■■□□□ 1.3
SRSF1-209ENST00000585096 RBM17Q96I25 401 aaKnown RBP23.15■■□□□ 1.3
SRSF1-209ENST00000585096 NLRP3Q96P20 1036 aa23.15■■□□□ 1.3
SRSF1-209ENST00000585096 SLC10A5Q5PT55 438 aa23.14■■□□□ 1.29
SRSF1-209ENST00000585096 NLRP10Q86W26 655 aa23.14■■□□□ 1.29
SRSF1-209ENST00000585096 ELL2O00472 640 aaPredicted RBP23.13■■□□□ 1.29
SRSF1-209ENST00000585096 HSPA6P17066 643 aa23.13■■□□□ 1.29
SRSF1-209ENST00000585096 FKBP4Q02790 459 aaKnown RBP eCLIP23.13■■□□□ 1.29
SRSF1-209ENST00000585096 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
SRSF1-209ENST00000585096 NUP98P52948 1817 aa23.12■■□□□ 1.29
SRSF1-209ENST00000585096 CC2D2BQ6DHV5 1058 aa23.12■■□□□ 1.29
SRSF1-209ENST00000585096 RBM46Q8TBY0 533 aaKnown RBP23.12■■□□□ 1.29
SRSF1-209ENST00000585096 CRAMP1Q96RY5 1269 aa23.12■■□□□ 1.29
SRSF1-209ENST00000585096 TRMT112Q9UI30 125 aaKnown RBP23.12■■□□□ 1.29
SRSF1-209ENST00000585096 SLX4Q8IY92 1834 aa23.11■■□□□ 1.29
SRSF1-209ENST00000585096 WWC1Q8IX03 1113 aa23.11■■□□□ 1.29
SRSF1-209ENST00000585096 C8orf58Q8NAV2 365 aa23.11■■□□□ 1.29
SRSF1-209ENST00000585096 VEGFAP15692 232 aaPredicted RBP23.1■■□□□ 1.29
SRSF1-209ENST00000585096 OLFM4Q6UX06 510 aa23.1■■□□□ 1.29
SRSF1-209ENST00000585096 SBF1O95248 1867 aa23.1■■□□□ 1.29
SRSF1-209ENST00000585096 SH3TC1Q8TE82 1336 aa23.09■■□□□ 1.29
SRSF1-209ENST00000585096 GOLGA2Q08379 1002 aa23.09■■□□□ 1.29
SRSF1-209ENST00000585096 GRIPAP1Q4V328 841 aa23.09■■□□□ 1.29
SRSF1-209ENST00000585096 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
SRSF1-209ENST00000585096 CCDC30Q5VVM6 783 aa23.08■■□□□ 1.29
SRSF1-209ENST00000585096 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
SRSF1-209ENST00000585096 ZNF277Q9NRM2 450 aaPredicted RBP23.08■■□□□ 1.29
SRSF1-209ENST00000585096 TNRC6CQ9HCJ0 1690 aaKnown RBP23.08■■□□□ 1.29
SRSF1-209ENST00000585096 ARFGEF2Q9Y6D5 1785 aa23.07■■□□□ 1.28
SRSF1-209ENST00000585096 PPEF1O14829 653 aaPredicted RBP23.07■■□□□ 1.28
SRSF1-209ENST00000585096 FSTL1Q12841 308 aa23.07■■□□□ 1.28
SRSF1-209ENST00000585096 RIC3Q7Z5B4 369 aa23.07■■□□□ 1.28
SRSF1-209ENST00000585096 SYNE4Q8N205 404 aa23.07■■□□□ 1.28
SRSF1-209ENST00000585096 PSMD1Q99460 953 aa23.07■■□□□ 1.28
SRSF1-209ENST00000585096 ISCA1Q9BUE6 129 aa23.07■■□□□ 1.28
SRSF1-209ENST00000585096 IL16Q14005 1332 aa23.07■■□□□ 1.28
SRSF1-209ENST00000585096 HCLS1P14317 486 aaPredicted RBP23.06■■□□□ 1.28
SRSF1-209ENST00000585096 TSR2Q969E8 191 aaKnown RBP23.06■■□□□ 1.28
SRSF1-209ENST00000585096 FER1L6Q2WGJ9 1857 aa23.06■■□□□ 1.28
SRSF1-209ENST00000585096 ATP5J2-PTCD1G3V325 749 aa23.05■■□□□ 1.28
SRSF1-209ENST00000585096 IARSP41252 1262 aaKnown RBP23.05■■□□□ 1.28
SRSF1-209ENST00000585096 TRIM28Q13263 835 aaKnown RBP23.05■■□□□ 1.28
SRSF1-209ENST00000585096 PHAXQ9H814 394 aaKnown RBP23.05■■□□□ 1.28
SRSF1-209ENST00000585096 TSPYL6Q8N831 410 aa23.04■■□□□ 1.28
SRSF1-209ENST00000585096 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
SRSF1-209ENST00000585096 BBOX1O75936 387 aa23.03■■□□□ 1.28
SRSF1-209ENST00000585096 DDX58O95786 925 aaKnown RBP23.03■■□□□ 1.28
SRSF1-209ENST00000585096 APLP1P51693 650 aa23.03■■□□□ 1.28
SRSF1-209ENST00000585096 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
SRSF1-209ENST00000585096 SMC1BQ8NDV3 1235 aa23.03■■□□□ 1.28
SRSF1-209ENST00000585096 DDNO94850 711 aaPredicted RBP23.02■■□□□ 1.28
SRSF1-209ENST00000585096 WDR63Q8IWG1 891 aa23.02■■□□□ 1.28
SRSF1-209ENST00000585096 STK31Q9BXU1 1019 aa23.02■■□□□ 1.28
SRSF1-209ENST00000585096 ATP6V0A2Q9Y487 856 aa23.02■■□□□ 1.28
SRSF1-209ENST00000585096 ABCC4O15439 1325 aa23.02■■□□□ 1.28
SRSF1-209ENST00000585096 TIAM2Q8IVF5 1701 aa23.02■■□□□ 1.28
SRSF1-209ENST00000585096 TWISTNBQ3B726 338 aaPredicted RBP23.01■■□□□ 1.27
SRSF1-209ENST00000585096 FAM9BQ8IZU0 186 aa23.01■■□□□ 1.27
SRSF1-209ENST00000585096 JDP2Q8WYK2 163 aa23.01■■□□□ 1.27
SRSF1-209ENST00000585096 ZNF428Q96B54 188 aa23.01■■□□□ 1.27
SRSF1-209ENST00000585096 FAM89AQ96GI7 184 aa23.01■■□□□ 1.27
SRSF1-209ENST00000585096 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
SRSF1-209ENST00000585096 SNED1Q8TER0 1413 aa23■■□□□ 1.27
SRSF1-209ENST00000585096 POTECB2RU33 542 aa23■■□□□ 1.27
SRSF1-209ENST00000585096 CACNA1SQ13698 1873 aa23■■□□□ 1.27
SRSF1-209ENST00000585096 HSP90B1P14625 803 aaKnown RBP22.99■■□□□ 1.27
SRSF1-209ENST00000585096 MYD88Q99836 296 aa22.99■■□□□ 1.27
SRSF1-209ENST00000585096 IQCA1LA6NCM1 817 aa22.98■■□□□ 1.27
SRSF1-209ENST00000585096 GRAPQ13588 217 aa22.98■■□□□ 1.27
SRSF1-209ENST00000585096 SP8Q8IXZ3 490 aa22.98■■□□□ 1.27
SRSF1-209ENST00000585096 GRAPLQ8TC17 118 aaPredicted RBP22.98■■□□□ 1.27
SRSF1-209ENST00000585096 ANKRD36CQ5JPF3 1778 aa22.97■■□□□ 1.27
SRSF1-209ENST00000585096 FZD9O00144 591 aa22.97■■□□□ 1.27
SRSF1-209ENST00000585096 IRS4O14654 1257 aaPredicted RBP22.97■■□□□ 1.27
SRSF1-209ENST00000585096 SF3B3Q15393 1217 aaKnown RBP22.97■■□□□ 1.27
SRSF1-209ENST00000585096 TMC4Q7Z404 712 aa22.97■■□□□ 1.27
SRSF1-209ENST00000585096 LARGE2Q8N3Y3 721 aa22.97■■□□□ 1.27
SRSF1-209ENST00000585096 ZBTB38Q8NAP3 1195 aaPredicted RBP22.97■■□□□ 1.27
SRSF1-209ENST00000585096 CCDC191Q8NCU4 936 aa22.97■■□□□ 1.27
SRSF1-209ENST00000585096 SUPT20HQ8NEM7 779 aa22.97■■□□□ 1.27
SRSF1-209ENST00000585096 L3MBTL3Q96JM7 780 aaPredicted RBP22.97■■□□□ 1.27
SRSF1-209ENST00000585096 METTL22Q9BUU2 404 aaPredicted RBP22.97■■□□□ 1.27
SRSF1-209ENST00000585096 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
SRSF1-209ENST00000585096 KSR2Q6VAB6 950 aa22.96■■□□□ 1.27
SRSF1-209ENST00000585096 VPS33BQ9H267 617 aa22.96■■□□□ 1.27
SRSF1-209ENST00000585096 FANCIQ9NVI1 1328 aa22.96■■□□□ 1.27
SRSF1-209ENST00000585096 WDR90Q96KV7 1748 aa22.96■■□□□ 1.27
SRSF1-209ENST00000585096 EIF6P56537 245 aaKnown RBP22.95■■□□□ 1.26
SRSF1-209ENST00000585096 CCDC88AQ3V6T2 1871 aa22.95■■□□□ 1.26
SRSF1-209ENST00000585096 DPP8Q6V1X1 898 aaPredicted RBP22.95■■□□□ 1.26
SRSF1-209ENST00000585096 ZNF541Q9H0D2 1346 aa22.95■■□□□ 1.26
SRSF1-209ENST00000585096 CWC25Q9NXE8 425 aaPredicted RBP22.95■■□□□ 1.26
SRSF1-209ENST00000585096 MAP3K2Q9Y2U5 619 aa22.95■■□□□ 1.26
SRSF1-209ENST00000585096 DICER1Q9UPY3 1922 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms