RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ZNF652Q9Y2D9 606 aa24.36■■□□□ 1.49
TOP3A-220ENST00000585031 TLL2Q9Y6L7 1015 aa24.36■■□□□ 1.49
TOP3A-220ENST00000585031 ABCC12Q96J65 1359 aa24.36■■□□□ 1.49
TOP3A-220ENST00000585031 AOC2O75106 756 aa24.35■■□□□ 1.49
TOP3A-220ENST00000585031 ALDH1B1P30837 517 aa24.35■■□□□ 1.49
TOP3A-220ENST00000585031 GRM1Q13255 1194 aa24.35■■□□□ 1.49
TOP3A-220ENST00000585031 NUP98P52948 1817 aa24.35■■□□□ 1.49
TOP3A-220ENST00000585031 SNRPA1P09661 255 aaKnown RBP24.34■■□□□ 1.49
TOP3A-220ENST00000585031 CRY2Q49AN0 593 aa24.34■■□□□ 1.49
TOP3A-220ENST00000585031 PAXIP1Q6ZW49 1069 aaPredicted RBP24.34■■□□□ 1.49
TOP3A-220ENST00000585031 JDP2Q8WYK2 163 aa24.34■■□□□ 1.49
TOP3A-220ENST00000585031 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
TOP3A-220ENST00000585031 NUTM1Q86Y26 1132 aa24.33■■□□□ 1.49
TOP3A-220ENST00000585031 CLSPNQ9HAW4 1339 aa24.33■■□□□ 1.48
TOP3A-220ENST00000585031 CA12O43570 354 aa24.32■■□□□ 1.48
TOP3A-220ENST00000585031 USP50Q70EL3 339 aaPredicted RBP24.32■■□□□ 1.48
TOP3A-220ENST00000585031 MCM10Q7L590 875 aa24.32■■□□□ 1.48
TOP3A-220ENST00000585031 RSPH6AQ9H0K4 717 aa24.32■■□□□ 1.48
TOP3A-220ENST00000585031 RGL2O15211 777 aa24.31■■□□□ 1.48
TOP3A-220ENST00000585031 PRKAR2BP31323 418 aa24.31■■□□□ 1.48
TOP3A-220ENST00000585031 EIF6P56537 245 aaKnown RBP24.31■■□□□ 1.48
TOP3A-220ENST00000585031 LMOD1P29536 600 aaPredicted RBP24.3■■□□□ 1.48
TOP3A-220ENST00000585031 DCTN1Q14203 1278 aa24.3■■□□□ 1.48
TOP3A-220ENST00000585031 SAPCD2Q86UD0 394 aa24.29■■□□□ 1.48
TOP3A-220ENST00000585031 CC2D2BQ6DHV5 1058 aa24.28■■□□□ 1.48
TOP3A-220ENST00000585031 HHIPL1Q96JK4 782 aa24.28■■□□□ 1.48
TOP3A-220ENST00000585031 CFAP44Q96MT7 982 aa24.28■■□□□ 1.48
TOP3A-220ENST00000585031 PDE4DIPQ5VU43 2346 aa24.28■■□□□ 1.48
TOP3A-220ENST00000585031 GTF2E1P29083 439 aaPredicted RBP24.27■■□□□ 1.48
TOP3A-220ENST00000585031 HOXA10P31260 410 aaPredicted RBP24.27■■□□□ 1.48
TOP3A-220ENST00000585031 C3orf67Q6ZVT6 689 aa24.27■■□□□ 1.48
TOP3A-220ENST00000585031 LARGE2Q8N3Y3 721 aa24.27■■□□□ 1.48
TOP3A-220ENST00000585031 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
TOP3A-220ENST00000585031 BRPF1P55201 1214 aaPredicted RBP24.26■■□□□ 1.47
TOP3A-220ENST00000585031 MIS18AQ9NYP9 233 aa24.26■■□□□ 1.47
TOP3A-220ENST00000585031 LAMB4A4D0S4 1761 aa24.25■■□□□ 1.47
TOP3A-220ENST00000585031 NGEFQ8N5V2 710 aa24.25■■□□□ 1.47
TOP3A-220ENST00000585031 DGKZQ13574 1117 aa24.24■■□□□ 1.47
TOP3A-220ENST00000585031 TTLL7Q6ZT98 887 aa24.24■■□□□ 1.47
TOP3A-220ENST00000585031 UBN2Q6ZU65 1347 aa24.24■■□□□ 1.47
TOP3A-220ENST00000585031 GRIPAP1Q4V328 841 aa24.23■■□□□ 1.47
TOP3A-220ENST00000585031 ZIC5Q96T25 663 aa24.23■■□□□ 1.47
TOP3A-220ENST00000585031 RIC1Q4ADV7 1423 aa24.23■■□□□ 1.47
TOP3A-220ENST00000585031 GLIS2Q9BZE0 524 aaPredicted RBP24.22■■□□□ 1.47
TOP3A-220ENST00000585031 GPRC5DQ9NZD1 345 aa24.22■■□□□ 1.47
TOP3A-220ENST00000585031 PGAP2Q9UHJ9 254 aa24.22■■□□□ 1.47
TOP3A-220ENST00000585031 NPC1L1Q9UHC9 1359 aa24.21■■□□□ 1.47
TOP3A-220ENST00000585031 CELF2O95319 508 aaKnown RBP24.21■■□□□ 1.47
TOP3A-220ENST00000585031 GPTP24298 496 aa24.21■■□□□ 1.47
TOP3A-220ENST00000585031 SUSD4Q5VX71 490 aa24.21■■□□□ 1.47
TOP3A-220ENST00000585031 RPGRQ92834 1020 aaKnown RBP24.21■■□□□ 1.47
TOP3A-220ENST00000585031 ADARB2Q9NS39 739 aaKnown RBP24.21■■□□□ 1.47
TOP3A-220ENST00000585031 CXCL9Q07325 125 aa24.2■■□□□ 1.46
TOP3A-220ENST00000585031 AOC3Q16853 763 aa24.2■■□□□ 1.46
TOP3A-220ENST00000585031 CRAMP1Q96RY5 1269 aa24.2■■□□□ 1.46
TOP3A-220ENST00000585031 NYXQ9GZU5 481 aa24.2■■□□□ 1.46
TOP3A-220ENST00000585031 MAP3K15Q6ZN16 1313 aa24.19■■□□□ 1.46
TOP3A-220ENST00000585031 ERVV-1B6SEH8 477 aa24.19■■□□□ 1.46
TOP3A-220ENST00000585031 PPEF1O14829 653 aaPredicted RBP24.19■■□□□ 1.46
TOP3A-220ENST00000585031 HIRAP54198 1017 aaPredicted RBP24.19■■□□□ 1.46
TOP3A-220ENST00000585031 CIAPIN1Q6FI81 312 aa24.19■■□□□ 1.46
TOP3A-220ENST00000585031 NIM1KQ8IY84 436 aa24.19■■□□□ 1.46
TOP3A-220ENST00000585031 PPIP5K2O43314 1243 aa24.18■■□□□ 1.46
TOP3A-220ENST00000585031 DLK2Q6UY11 383 aa24.18■■□□□ 1.46
TOP3A-220ENST00000585031 RTF1Q92541 710 aaKnown RBP24.18■■□□□ 1.46
TOP3A-220ENST00000585031 KDM3BQ7LBC6 1761 aa24.18■■□□□ 1.46
TOP3A-220ENST00000585031 DLG5Q8TDM6 1919 aa24.18■■□□□ 1.46
TOP3A-220ENST00000585031 GMPSP49915 693 aaPredicted RBP24.17■■□□□ 1.46
TOP3A-220ENST00000585031 TAF7Q15545 349 aaPredicted RBP24.17■■□□□ 1.46
TOP3A-220ENST00000585031 RRP7AQ9Y3A4 280 aaKnown RBP24.17■■□□□ 1.46
TOP3A-220ENST00000585031 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
TOP3A-220ENST00000585031 SHTN1A0MZ66 631 aa24.16■■□□□ 1.46
TOP3A-220ENST00000585031 NTSR2O95665 410 aa24.16■■□□□ 1.46
TOP3A-220ENST00000585031 ZNF34Q8IZ26 560 aa24.16■■□□□ 1.46
TOP3A-220ENST00000585031 RBM17Q96I25 401 aaKnown RBP24.16■■□□□ 1.46
TOP3A-220ENST00000585031 ZBTB3Q9H5J0 574 aa24.16■■□□□ 1.46
TOP3A-220ENST00000585031 TAF1P21675 1872 aa24.15■■□□□ 1.46
TOP3A-220ENST00000585031 VPS33BQ9H267 617 aa24.15■■□□□ 1.46
TOP3A-220ENST00000585031 IBTKQ9P2D0 1353 aaPredicted RBP24.15■■□□□ 1.46
TOP3A-220ENST00000585031 LAMB2P55268 1798 aa24.14■■□□□ 1.46
TOP3A-220ENST00000585031 NOGQ13253 232 aa24.14■■□□□ 1.45
TOP3A-220ENST00000585031 TRPM4Q8TD43 1214 aa24.14■■□□□ 1.45
TOP3A-220ENST00000585031 ZC3H15Q8WU90 426 aaKnown RBP24.14■■□□□ 1.45
TOP3A-220ENST00000585031 ZNRF3Q9ULT6 936 aa24.14■■□□□ 1.45
TOP3A-220ENST00000585031 U2AF1L5P0DN76 240 aaPredicted RBP24.13■■□□□ 1.45
TOP3A-220ENST00000585031 MYL6BP14649 208 aa24.13■■□□□ 1.45
TOP3A-220ENST00000585031 U2AF1Q01081 240 aaKnown RBP eCLIP24.13■■□□□ 1.45
TOP3A-220ENST00000585031 ZNF408Q9H9D4 720 aa24.13■■□□□ 1.45
TOP3A-220ENST00000585031 ATP6V0A2Q9Y487 856 aa24.13■■□□□ 1.45
TOP3A-220ENST00000585031 HTATSF1O43719 755 aaKnown RBP24.12■■□□□ 1.45
TOP3A-220ENST00000585031 RTFDC1Q9BY42 306 aaPredicted RBP24.12■■□□□ 1.45
TOP3A-220ENST00000585031 ABCC4O15439 1325 aa24.1■■□□□ 1.45
TOP3A-220ENST00000585031 RAD17O75943 681 aa24.1■■□□□ 1.45
TOP3A-220ENST00000585031 EIF4A1P60842 406 aaKnown RBP24.1■■□□□ 1.45
TOP3A-220ENST00000585031 CDC37L1Q7L3B6 337 aa24.1■■□□□ 1.45
TOP3A-220ENST00000585031 PRPF38BQ5VTL8 546 aaKnown RBP24.09■■□□□ 1.45
TOP3A-220ENST00000585031 KIF6Q6ZMV9 814 aa24.09■■□□□ 1.45
TOP3A-220ENST00000585031 YDJCA8MPS7 323 aa24.08■■□□□ 1.45
TOP3A-220ENST00000585031 SOX10P56693 466 aa24.08■■□□□ 1.45
TOP3A-220ENST00000585031 GIGYF2Q6Y7W6 1299 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms