RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 TRIM28Q13263 835 aaKnown RBP21.64■■□□□ 1.05
CSNK1D-225ENST00000584913 ERFEQ4G0M1 354 aa21.64■■□□□ 1.05
CSNK1D-225ENST00000584913 CC2D2BQ6DHV5 1058 aa21.64■■□□□ 1.05
CSNK1D-225ENST00000584913 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
CSNK1D-225ENST00000584913 C21orf2O43822 256 aa21.63■■□□□ 1.05
CSNK1D-225ENST00000584913 CCDC93Q567U6 631 aa21.63■■□□□ 1.05
CSNK1D-225ENST00000584913 NUTM1Q86Y26 1132 aa21.63■■□□□ 1.05
CSNK1D-225ENST00000584913 C8orf58Q8NAV2 365 aa21.63■■□□□ 1.05
CSNK1D-225ENST00000584913 CACNA1SQ13698 1873 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 KDM2BQ8NHM5 1336 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 FAM177BA6PVY3 158 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 C1QTNF8P60827 252 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 RASSF7Q02833 373 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 DIEXFQ68CQ4 756 aaKnown RBP21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 NLRP3Q96P20 1036 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 CRAMP1Q96RY5 1269 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 ISCA1Q9BUE6 129 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 TAOK3Q9H2K8 898 aa21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 DICER1Q9UPY3 1922 aaKnown RBP21.62■■□□□ 1.05
CSNK1D-225ENST00000584913 SH3TC1Q8TE82 1336 aa21.61■■□□□ 1.05
CSNK1D-225ENST00000584913 DDX58O95786 925 aaKnown RBP21.61■■□□□ 1.05
CSNK1D-225ENST00000584913 RPGRQ92834 1020 aaKnown RBP21.61■■□□□ 1.05
CSNK1D-225ENST00000584913 SNED1Q8TER0 1413 aa21.61■■□□□ 1.05
CSNK1D-225ENST00000584913 TWISTNBQ3B726 338 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-225ENST00000584913 RTKN2Q8IZC4 609 aa21.6■■□□□ 1.05
CSNK1D-225ENST00000584913 FANCIQ9NVI1 1328 aa21.59■■□□□ 1.05
CSNK1D-225ENST00000584913 LAMB2P55268 1798 aa21.59■■□□□ 1.05
CSNK1D-225ENST00000584913 CCER2I3L3R5 266 aa21.59■■□□□ 1.05
CSNK1D-225ENST00000584913 FAM9BQ8IZU0 186 aa21.59■■□□□ 1.05
CSNK1D-225ENST00000584913 TSR2Q969E8 191 aaKnown RBP21.59■■□□□ 1.05
CSNK1D-225ENST00000584913 RBM17Q96I25 401 aaKnown RBP21.59■■□□□ 1.05
CSNK1D-225ENST00000584913 STK31Q9BXU1 1019 aa21.59■■□□□ 1.05
CSNK1D-225ENST00000584913 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
CSNK1D-225ENST00000584913 TRMT112Q9UI30 125 aaKnown RBP21.58■■□□□ 1.05
CSNK1D-225ENST00000584913 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
CSNK1D-225ENST00000584913 ELL2O00472 640 aaPredicted RBP21.57■■□□□ 1.04
CSNK1D-225ENST00000584913 KIF3CO14782 793 aa21.57■■□□□ 1.04
CSNK1D-225ENST00000584913 HSP90B1P14625 803 aaKnown RBP21.57■■□□□ 1.04
CSNK1D-225ENST00000584913 FKBP4Q02790 459 aaKnown RBP eCLIP21.57■■□□□ 1.04
CSNK1D-225ENST00000584913 TSPYL6Q8N831 410 aa21.57■■□□□ 1.04
CSNK1D-225ENST00000584913 PSMD1Q99460 953 aa21.57■■□□□ 1.04
CSNK1D-225ENST00000584913 ZNF521Q96K83 1311 aa21.56■■□□□ 1.04
CSNK1D-225ENST00000584913 PRELPP51888 382 aa21.56■■□□□ 1.04
CSNK1D-225ENST00000584913 RIC3Q7Z5B4 369 aa21.56■■□□□ 1.04
CSNK1D-225ENST00000584913 DDX60Q8IY21 1712 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-225ENST00000584913 CCDC191Q8NCU4 936 aa21.55■■□□□ 1.04
CSNK1D-225ENST00000584913 PHAXQ9H814 394 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-225ENST00000584913 CCDC88AQ3V6T2 1871 aa21.54■■□□□ 1.04
CSNK1D-225ENST00000584913 GLTPD2A6NH11 291 aa21.54■■□□□ 1.04
CSNK1D-225ENST00000584913 TMC4Q7Z404 712 aa21.54■■□□□ 1.04
CSNK1D-225ENST00000584913 ZNF526Q8TF50 670 aaPredicted RBP21.54■■□□□ 1.04
CSNK1D-225ENST00000584913 WDR90Q96KV7 1748 aa21.53■■□□□ 1.04
CSNK1D-225ENST00000584913 METTL22Q9BUU2 404 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-225ENST00000584913 ZNF219Q9P2Y4 722 aaPredicted RBP21.53■■□□□ 1.04
CSNK1D-225ENST00000584913 PPEF1O14829 653 aaPredicted RBP21.52■■□□□ 1.04
CSNK1D-225ENST00000584913 BBOX1O75936 387 aa21.52■■□□□ 1.04
CSNK1D-225ENST00000584913 TOMM70O94826 608 aa21.52■■□□□ 1.04
CSNK1D-225ENST00000584913 SF3B3Q15393 1217 aaKnown RBP21.52■■□□□ 1.04
CSNK1D-225ENST00000584913 DPY19L2Q6NUT2 758 aa21.52■■□□□ 1.04
CSNK1D-225ENST00000584913 KSR2Q6VAB6 950 aa21.52■■□□□ 1.04
CSNK1D-225ENST00000584913 VPS33BQ9H267 617 aa21.52■■□□□ 1.04
CSNK1D-225ENST00000584913 C3orf67Q6ZVT6 689 aa21.51■■□□□ 1.03
CSNK1D-225ENST00000584913 ZBTB38Q8NAP3 1195 aaPredicted RBP21.51■■□□□ 1.03
CSNK1D-225ENST00000584913 LRRC37AA6NMS7 1700 aa21.5■■□□□ 1.03
CSNK1D-225ENST00000584913 VAMP4O75379 141 aa21.5■■□□□ 1.03
CSNK1D-225ENST00000584913 TMX4Q9H1E5 349 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-225ENST00000584913 ATP6V0A2Q9Y487 856 aa21.5■■□□□ 1.03
CSNK1D-225ENST00000584913 ABCC4O15439 1325 aa21.5■■□□□ 1.03
CSNK1D-225ENST00000584913 ATP5J2-PTCD1G3V325 749 aa21.49■■□□□ 1.03
CSNK1D-225ENST00000584913 PCCAP05165 728 aaPredicted RBP21.49■■□□□ 1.03
CSNK1D-225ENST00000584913 GRAPQ13588 217 aa21.49■■□□□ 1.03
CSNK1D-225ENST00000584913 DDX46Q7L014 1031 aaKnown RBP21.49■■□□□ 1.03
CSNK1D-225ENST00000584913 GRAPLQ8TC17 118 aaPredicted RBP21.49■■□□□ 1.03
CSNK1D-225ENST00000584913 NMRK2Q9NPI5 230 aa21.49■■□□□ 1.03
CSNK1D-225ENST00000584913 CWC25Q9NXE8 425 aaPredicted RBP21.49■■□□□ 1.03
CSNK1D-225ENST00000584913 SLC4A2P04920 1241 aa21.48■■□□□ 1.03
CSNK1D-225ENST00000584913 HCLS1P14317 486 aaPredicted RBP21.48■■□□□ 1.03
CSNK1D-225ENST00000584913 NEXNQ0ZGT2 675 aa21.48■■□□□ 1.03
CSNK1D-225ENST00000584913 RBM46Q8TBY0 533 aaKnown RBP21.48■■□□□ 1.03
CSNK1D-225ENST00000584913 MYD88Q99836 296 aa21.48■■□□□ 1.03
CSNK1D-225ENST00000584913 CDHR2Q9BYE9 1310 aa21.48■■□□□ 1.03
CSNK1D-225ENST00000584913 IARSP41252 1262 aaKnown RBP21.47■■□□□ 1.03
CSNK1D-225ENST00000584913 EXOSC9Q06265 439 aaKnown RBP21.47■■□□□ 1.03
CSNK1D-225ENST00000584913 SP8Q8IXZ3 490 aa21.47■■□□□ 1.03
CSNK1D-225ENST00000584913 FAM89AQ96GI7 184 aa21.47■■□□□ 1.03
CSNK1D-225ENST00000584913 MAP3K2Q9Y2U5 619 aa21.47■■□□□ 1.03
CSNK1D-225ENST00000584913 PI4KAP2A4QPH2 592 aa21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 IRS4O14654 1257 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 FLIIQ13045 1269 aa21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 PI4KAP1Q8N8J0 262 aa21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 SUPT20HQ8NEM7 779 aa21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 RTFDC1Q9BY42 306 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 SPINK5Q9NQ38 1064 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-225ENST00000584913 E9PSI1 815 aa21.45■■□□□ 1.02
CSNK1D-225ENST00000584913 FSTL1Q12841 308 aa21.45■■□□□ 1.02
CSNK1D-225ENST00000584913 C16orf71Q8IYS4 520 aaPredicted RBP21.45■■□□□ 1.02
CSNK1D-225ENST00000584913 SYNE4Q8N205 404 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms