RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 HDGFL1Q5TGJ6 251 aa17.3■□□□□ 0.36
SREBF1-223ENST00000584760 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
SREBF1-223ENST00000584760 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
SREBF1-223ENST00000584760 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
SREBF1-223ENST00000584760 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
SREBF1-223ENST00000584760 ABCC12Q96J65 1359 aa17.29■□□□□ 0.36
SREBF1-223ENST00000584760 STYK1Q6J9G0 422 aa17.29■□□□□ 0.36
SREBF1-223ENST00000584760 PRPF40BQ6NWY9 871 aaKnown RBP17.29■□□□□ 0.36
SREBF1-223ENST00000584760 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
SREBF1-223ENST00000584760 WWC1Q8IX03 1113 aa17.29■□□□□ 0.36
SREBF1-223ENST00000584760 LAMB2P55268 1798 aa17.29■□□□□ 0.36
SREBF1-223ENST00000584760 SRGNP10124 158 aa17.28■□□□□ 0.36
SREBF1-223ENST00000584760 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
SREBF1-223ENST00000584760 ZNF34Q8IZ26 560 aa17.28■□□□□ 0.36
SREBF1-223ENST00000584760 XAGE3Q8WTP9 111 aa17.28■□□□□ 0.36
SREBF1-223ENST00000584760 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-223ENST00000584760 FAM177BA6PVY3 158 aa17.27■□□□□ 0.36
SREBF1-223ENST00000584760 FOXN1O15353 648 aa17.27■□□□□ 0.36
SREBF1-223ENST00000584760 GPTP24298 496 aa17.27■□□□□ 0.36
SREBF1-223ENST00000584760 COPS6Q7L5N1 327 aa17.27■□□□□ 0.36
SREBF1-223ENST00000584760 MASTLQ96GX5 879 aa17.27■□□□□ 0.36
SREBF1-223ENST00000584760 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.35
SREBF1-223ENST00000584760 IQCA1LA6NCM1 817 aa17.26■□□□□ 0.35
SREBF1-223ENST00000584760 SOGA3Q5TF21 947 aa17.26■□□□□ 0.35
SREBF1-223ENST00000584760 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
SREBF1-223ENST00000584760 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-223ENST00000584760 IL16Q14005 1332 aa17.25■□□□□ 0.35
SREBF1-223ENST00000584760 LDHDQ86WU2 507 aa17.25■□□□□ 0.35
SREBF1-223ENST00000584760 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
SREBF1-223ENST00000584760 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
SREBF1-223ENST00000584760 TAF1DQ9H5J8 278 aaPredicted RBP17.25■□□□□ 0.35
SREBF1-223ENST00000584760 CNTNAP1P78357 1384 aa17.25■□□□□ 0.35
SREBF1-223ENST00000584760 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
SREBF1-223ENST00000584760 NTSR2O95665 410 aa17.24■□□□□ 0.35
SREBF1-223ENST00000584760 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
SREBF1-223ENST00000584760 EAPPQ56P03 285 aaPredicted RBP17.24■□□□□ 0.35
SREBF1-223ENST00000584760 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
SREBF1-223ENST00000584760 NUTM1Q86Y26 1132 aa17.24■□□□□ 0.35
SREBF1-223ENST00000584760 CACNA1FO60840 1977 aa17.24■□□□□ 0.35
SREBF1-223ENST00000584760 PASKQ96RG2 1323 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 VEGFBP49765 207 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 PARP10Q53GL7 1025 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 CCDC93Q567U6 631 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 AIDAQ96BJ3 306 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 L3MBTL3Q96JM7 780 aaPredicted RBP17.23■□□□□ 0.35
SREBF1-223ENST00000584760 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
SREBF1-223ENST00000584760 TMEM88BA6NKF7 163 aa17.22■□□□□ 0.35
SREBF1-223ENST00000584760 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-223ENST00000584760 NPR1P16066 1061 aa17.22■□□□□ 0.35
SREBF1-223ENST00000584760 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-223ENST00000584760 CRY2Q49AN0 593 aa17.22■□□□□ 0.35
SREBF1-223ENST00000584760 HSP90AB3PQ58FF7 597 aa17.22■□□□□ 0.35
SREBF1-223ENST00000584760 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
SREBF1-223ENST00000584760 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
SREBF1-223ENST00000584760 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
SREBF1-223ENST00000584760 ITGBL1O95965 494 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-223ENST00000584760 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.35
SREBF1-223ENST00000584760 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
SREBF1-223ENST00000584760 PLBD2Q8NHP8 589 aa17.21■□□□□ 0.35
SREBF1-223ENST00000584760 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.34
SREBF1-223ENST00000584760 ZNF541Q9H0D2 1346 aa17.21■□□□□ 0.34
SREBF1-223ENST00000584760 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.34
SREBF1-223ENST00000584760 FKBP4Q02790 459 aaKnown RBP eCLIP17.2■□□□□ 0.34
SREBF1-223ENST00000584760 TCIRG1Q13488 830 aa17.2■□□□□ 0.34
SREBF1-223ENST00000584760 PPP1R42Q7Z4L9 355 aa17.2■□□□□ 0.34
SREBF1-223ENST00000584760 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
SREBF1-223ENST00000584760 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
SREBF1-223ENST00000584760 ANKRD13DQ6ZTN6 518 aa17.19■□□□□ 0.34
SREBF1-223ENST00000584760 WDR63Q8IWG1 891 aa17.19■□□□□ 0.34
SREBF1-223ENST00000584760 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
SREBF1-223ENST00000584760 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
SREBF1-223ENST00000584760 EPHX2P34913 555 aa17.18■□□□□ 0.34
SREBF1-223ENST00000584760 LBX1P52954 281 aa17.18■□□□□ 0.34
SREBF1-223ENST00000584760 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
SREBF1-223ENST00000584760 SNED1Q8TER0 1413 aa17.18■□□□□ 0.34
SREBF1-223ENST00000584760 TAF1P21675 1872 aa17.17■□□□□ 0.34
SREBF1-223ENST00000584760 SLC10A5Q5PT55 438 aa17.17■□□□□ 0.34
SREBF1-223ENST00000584760 MAP1SQ66K74 1059 aaPredicted RBP17.17■□□□□ 0.34
SREBF1-223ENST00000584760 C3orf67Q6ZVT6 689 aa17.17■□□□□ 0.34
SREBF1-223ENST00000584760 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
SREBF1-223ENST00000584760 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
SREBF1-223ENST00000584760 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
SREBF1-223ENST00000584760 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
SREBF1-223ENST00000584760 WBP1LQ9NX94 342 aa17.17■□□□□ 0.34
SREBF1-223ENST00000584760 HOXA10P31260 410 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-223ENST00000584760 DEFB115Q30KQ5 88 aa17.16■□□□□ 0.34
SREBF1-223ENST00000584760 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-223ENST00000584760 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
SREBF1-223ENST00000584760 SYNE4Q8N205 404 aa17.16■□□□□ 0.34
SREBF1-223ENST00000584760 CHMP4AQ9BY43 222 aa17.16■□□□□ 0.34
SREBF1-223ENST00000584760 ZNF521Q96K83 1311 aa17.16■□□□□ 0.34
SREBF1-223ENST00000584760 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
SREBF1-223ENST00000584760 GOLGA2Q08379 1002 aa17.15■□□□□ 0.34
SREBF1-223ENST00000584760 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
SREBF1-223ENST00000584760 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-223ENST00000584760 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
SREBF1-223ENST00000584760 LRRC37AA6NMS7 1700 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms