RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 PLBD2Q8NHP8 589 aa21.39■■□□□ 1.01
LIMD2-212ENST00000584645 TCIRG1Q13488 830 aa21.38■■□□□ 1.01
LIMD2-212ENST00000584645 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
LIMD2-212ENST00000584645 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
LIMD2-212ENST00000584645 C7orf43Q8WVR3 580 aa21.37■■□□□ 1.01
LIMD2-212ENST00000584645 CCDC93Q567U6 631 aa21.36■■□□□ 1.01
LIMD2-212ENST00000584645 SLC10A5Q5PT55 438 aa21.36■■□□□ 1.01
LIMD2-212ENST00000584645 ANKRD13DQ6ZTN6 518 aa21.36■■□□□ 1.01
LIMD2-212ENST00000584645 TAOK3Q9H2K8 898 aa21.36■■□□□ 1.01
LIMD2-212ENST00000584645 KIF3CO14782 793 aa21.35■■□□□ 1.01
LIMD2-212ENST00000584645 HOXA10P31260 410 aaPredicted RBP21.35■■□□□ 1.01
LIMD2-212ENST00000584645 PRELPP51888 382 aa21.35■■□□□ 1.01
LIMD2-212ENST00000584645 NLRP10Q86W26 655 aa21.35■■□□□ 1.01
LIMD2-212ENST00000584645 C8orf58Q8NAV2 365 aa21.35■■□□□ 1.01
LIMD2-212ENST00000584645 ZNF219Q9P2Y4 722 aaPredicted RBP21.35■■□□□ 1.01
LIMD2-212ENST00000584645 CCDC30Q5VVM6 783 aa21.34■■□□□ 1.01
LIMD2-212ENST00000584645 RPGRQ92834 1020 aaKnown RBP21.34■■□□□ 1.01
LIMD2-212ENST00000584645 WDR63Q8IWG1 891 aa21.33■■□□□ 1.01
LIMD2-212ENST00000584645 NLRP3Q96P20 1036 aa21.33■■□□□ 1.01
LIMD2-212ENST00000584645 CRAMP1Q96RY5 1269 aa21.33■■□□□ 1.01
LIMD2-212ENST00000584645 ELL2O00472 640 aaPredicted RBP21.32■■□□□ 1
LIMD2-212ENST00000584645 GOLGA2Q08379 1002 aa21.32■■□□□ 1
LIMD2-212ENST00000584645 CC2D2BQ6DHV5 1058 aa21.32■■□□□ 1
LIMD2-212ENST00000584645 RTKN2Q8IZC4 609 aa21.32■■□□□ 1
LIMD2-212ENST00000584645 RBM17Q96I25 401 aaKnown RBP21.32■■□□□ 1
LIMD2-212ENST00000584645 ISCA1Q9BUE6 129 aa21.32■■□□□ 1
LIMD2-212ENST00000584645 LAMB2P55268 1798 aa21.32■■□□□ 1
LIMD2-212ENST00000584645 SH3TC1Q8TE82 1336 aa21.31■■□□□ 1
LIMD2-212ENST00000584645 GRIPAP1Q4V328 841 aa21.31■■□□□ 1
LIMD2-212ENST00000584645 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
LIMD2-212ENST00000584645 FKBP4Q02790 459 aaKnown RBP eCLIP21.3■■□□□ 1
LIMD2-212ENST00000584645 TRIM28Q13263 835 aaKnown RBP21.3■■□□□ 1
LIMD2-212ENST00000584645 NMRK2Q9NPI5 230 aa21.3■■□□□ 1
LIMD2-212ENST00000584645 TRMT112Q9UI30 125 aaKnown RBP21.3■■□□□ 1
LIMD2-212ENST00000584645 SNED1Q8TER0 1413 aa21.29■■□□□ 1
LIMD2-212ENST00000584645 GLTPD2A6NH11 291 aa21.29■■□□□ 1
LIMD2-212ENST00000584645 FAM9BQ8IZU0 186 aa21.29■■□□□ 1
LIMD2-212ENST00000584645 TSPYL6Q8N831 410 aa21.29■■□□□ 1
LIMD2-212ENST00000584645 DDX60Q8IY21 1712 aaKnown RBP21.29■■□□□ 1
LIMD2-212ENST00000584645 DDX58O95786 925 aaKnown RBP21.28■■□□□ 1
LIMD2-212ENST00000584645 TWISTNBQ3B726 338 aaPredicted RBP21.28■■□□□ 1
LIMD2-212ENST00000584645 RIC3Q7Z5B4 369 aa21.28■■□□□ 1
LIMD2-212ENST00000584645 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
LIMD2-212ENST00000584645 CACNA1FO60840 1977 aa21.28■■□□□ 1
LIMD2-212ENST00000584645 FANCIQ9NVI1 1328 aa21.28■■□□□ 1
LIMD2-212ENST00000584645 WDR90Q96KV7 1748 aa21.27■■□□□ 1
LIMD2-212ENST00000584645 TOMM70O94826 608 aa21.27■■□□□ 1
LIMD2-212ENST00000584645 C3orf67Q6ZVT6 689 aa21.27■■□□□ 1
LIMD2-212ENST00000584645 PSMD1Q99460 953 aa21.27■■□□□ 1
LIMD2-212ENST00000584645 STK31Q9BXU1 1019 aa21.27■■□□□ 1
LIMD2-212ENST00000584645 DPY19L2Q6NUT2 758 aa21.26■□□□□ 0.99
LIMD2-212ENST00000584645 SENP3-EIF4A1A0A087X0R7 540 aa21.25■□□□□ 0.99
LIMD2-212ENST00000584645 PPEF1O14829 653 aaPredicted RBP21.25■□□□□ 0.99
LIMD2-212ENST00000584645 C16orf71Q8IYS4 520 aaPredicted RBP21.25■□□□□ 0.99
LIMD2-212ENST00000584645 ATP5J2-PTCD1G3V325 749 aa21.24■□□□□ 0.99
LIMD2-212ENST00000584645 RBM46Q8TBY0 533 aaKnown RBP21.24■□□□□ 0.99
LIMD2-212ENST00000584645 ABCC4O15439 1325 aa21.24■□□□□ 0.99
LIMD2-212ENST00000584645 HCLS1P14317 486 aaPredicted RBP21.23■□□□□ 0.99
LIMD2-212ENST00000584645 HSP90B1P14625 803 aaKnown RBP21.23■□□□□ 0.99
LIMD2-212ENST00000584645 OLFM4Q6UX06 510 aa21.23■□□□□ 0.99
LIMD2-212ENST00000584645 CCDC191Q8NCU4 936 aa21.23■□□□□ 0.99
LIMD2-212ENST00000584645 TMX4Q9H1E5 349 aaPredicted RBP21.23■□□□□ 0.99
LIMD2-212ENST00000584645 RRAGCQ9HB90 399 aa21.23■□□□□ 0.99
LIMD2-212ENST00000584645 SALL2Q9Y467 1007 aaPredicted RBP21.23■□□□□ 0.99
LIMD2-212ENST00000584645 BBOX1O75936 387 aa21.22■□□□□ 0.99
LIMD2-212ENST00000584645 DDX46Q7L014 1031 aaKnown RBP21.22■□□□□ 0.99
LIMD2-212ENST00000584645 SYNE4Q8N205 404 aa21.22■□□□□ 0.99
LIMD2-212ENST00000584645 METTL22Q9BUU2 404 aaPredicted RBP21.22■□□□□ 0.99
LIMD2-212ENST00000584645 MYH16Q9H6N6 1097 aa21.22■□□□□ 0.99
LIMD2-212ENST00000584645 VEGFAP15692 232 aaPredicted RBP21.21■□□□□ 0.99
LIMD2-212ENST00000584645 IARSP41252 1262 aaKnown RBP21.21■□□□□ 0.99
LIMD2-212ENST00000584645 SF3B3Q15393 1217 aaKnown RBP21.21■□□□□ 0.99
LIMD2-212ENST00000584645 KSR2Q6VAB6 950 aa21.21■□□□□ 0.99
LIMD2-212ENST00000584645 TMC4Q7Z404 712 aa21.21■□□□□ 0.99
LIMD2-212ENST00000584645 ZBTB38Q8NAP3 1195 aaPredicted RBP21.21■□□□□ 0.99
LIMD2-212ENST00000584645 FAM89AQ96GI7 184 aa21.21■□□□□ 0.99
LIMD2-212ENST00000584645 MYD88Q99836 296 aa21.21■□□□□ 0.99
LIMD2-212ENST00000584645 ZNF277Q9NRM2 450 aaPredicted RBP21.21■□□□□ 0.99
LIMD2-212ENST00000584645 ATP6V0A2Q9Y487 856 aa21.21■□□□□ 0.99
LIMD2-212ENST00000584645 HSPA6P17066 643 aa21.2■□□□□ 0.98
LIMD2-212ENST00000584645 GRAPQ13588 217 aa21.2■□□□□ 0.98
LIMD2-212ENST00000584645 GRAPLQ8TC17 118 aaPredicted RBP21.2■□□□□ 0.98
LIMD2-212ENST00000584645 LRRC37AA6NMS7 1700 aa21.19■□□□□ 0.98
LIMD2-212ENST00000584645 FSTL1Q12841 308 aa21.19■□□□□ 0.98
LIMD2-212ENST00000584645 VPS33BQ9H267 617 aa21.19■□□□□ 0.98
LIMD2-212ENST00000584645 CWC25Q9NXE8 425 aaPredicted RBP21.19■□□□□ 0.98
LIMD2-212ENST00000584645 MAP3K2Q9Y2U5 619 aa21.19■□□□□ 0.98
LIMD2-212ENST00000584645 ZNF521Q96K83 1311 aa21.19■□□□□ 0.98
LIMD2-212ENST00000584645 IRS4O14654 1257 aaPredicted RBP21.18■□□□□ 0.98
LIMD2-212ENST00000584645 VAMP4O75379 141 aa21.18■□□□□ 0.98
LIMD2-212ENST00000584645 SLC4A2P04920 1241 aa21.18■□□□□ 0.98
LIMD2-212ENST00000584645 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
LIMD2-212ENST00000584645 SP8Q8IXZ3 490 aa21.18■□□□□ 0.98
LIMD2-212ENST00000584645 PI4KAP2A4QPH2 592 aa21.17■□□□□ 0.98
LIMD2-212ENST00000584645 CCER2I3L3R5 266 aa21.17■□□□□ 0.98
LIMD2-212ENST00000584645 EXOSC9Q06265 439 aaKnown RBP21.17■□□□□ 0.98
LIMD2-212ENST00000584645 NEXNQ0ZGT2 675 aa21.17■□□□□ 0.98
LIMD2-212ENST00000584645 PI4KAP1Q8N8J0 262 aa21.17■□□□□ 0.98
LIMD2-212ENST00000584645 SUPT20HQ8NEM7 779 aa21.17■□□□□ 0.98
LIMD2-212ENST00000584645 SCN4AP35499 1836 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms