RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 PAPPA2Q9BXP8 1791 aa8.68□□□□□ -1.02
CTC1-212ENST00000584439 DLL1O00548 723 aa8.67□□□□□ -1.02
CTC1-212ENST00000584439 DNAJC10Q8IXB1 793 aa8.67□□□□□ -1.02
CTC1-212ENST00000584439 SP7Q8TDD2 431 aaPredicted RBP8.67□□□□□ -1.02
CTC1-212ENST00000584439 ZNF277Q9NRM2 450 aaPredicted RBP8.67□□□□□ -1.02
CTC1-212ENST00000584439 TRIOBPQ9H2D6 2365 aa8.66□□□□□ -1.02
CTC1-212ENST00000584439 ERVV-2B6SEH9 535 aa8.66□□□□□ -1.02
CTC1-212ENST00000584439 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
CTC1-212ENST00000584439 SAPCD2Q86UD0 394 aa8.66□□□□□ -1.02
CTC1-212ENST00000584439 PNMA8AQ86V59 439 aaPredicted RBP8.66□□□□□ -1.02
CTC1-212ENST00000584439 NARFQ9UHQ1 456 aa8.66□□□□□ -1.02
CTC1-212ENST00000584439 CEP290O15078 2479 aa8.66□□□□□ -1.02
CTC1-212ENST00000584439 COL15A1P39059 1388 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 CA12O43570 354 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 EPS15P42566 896 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 TBC1D9BQ66K14 1250 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 SMYD5Q6GMV2 418 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 PRR5LQ6MZQ0 368 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
CTC1-212ENST00000584439 RGS22Q8NE09 1264 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 C7orf43Q8WVR3 580 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.65□□□□□ -1.02
CTC1-212ENST00000584439 UBR2Q8IWV8 1755 aa8.65□□□□□ -1.02
CTC1-212ENST00000584439 CHRM1P11229 460 aaPredicted RBP8.64□□□□□ -1.03
CTC1-212ENST00000584439 FXR2P51116 673 aaKnown RBP eCLIP8.64□□□□□ -1.03
CTC1-212ENST00000584439 FLIIQ13045 1269 aa8.64□□□□□ -1.03
CTC1-212ENST00000584439 DLK2Q6UY11 383 aa8.64□□□□□ -1.03
CTC1-212ENST00000584439 NFATC2IPQ8NCF5 419 aa8.64□□□□□ -1.03
CTC1-212ENST00000584439 TRAIPQ9BWF2 469 aa8.64□□□□□ -1.03
CTC1-212ENST00000584439 ZBTB1Q9Y2K1 713 aa8.64□□□□□ -1.03
CTC1-212ENST00000584439 RBBP6Q7Z6E9 1792 aaKnown RBP8.63□□□□□ -1.03
CTC1-212ENST00000584439 FZD9O00144 591 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 TRIM66O15016 1216 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
CTC1-212ENST00000584439 CYP19A1P11511 503 aaPredicted RBP8.63□□□□□ -1.03
CTC1-212ENST00000584439 CABP4P57796 275 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 PDE4DQ08499 809 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 SLC51AQ86UW1 340 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 AEBP1Q8IUX7 1158 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 GCC1Q96CN9 775 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 BRIP1Q9BX63 1249 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 MTMR7Q9Y216 660 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
CTC1-212ENST00000584439 KIAA0100Q14667 2235 aaKnown RBP8.62□□□□□ -1.03
CTC1-212ENST00000584439 ZNF316A6NFI3 1004 aaPredicted RBP8.62□□□□□ -1.03
CTC1-212ENST00000584439 CELF2O95319 508 aaKnown RBP8.62□□□□□ -1.03
CTC1-212ENST00000584439 SRGNP10124 158 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 PDE6BP35913 854 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 SCNN1DP51172 638 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 NEUROD1Q13562 356 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 SYNE4Q8N205 404 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 FAM212AQ96EL1 285 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 FAM117AQ9C073 453 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 UNC80Q8N2C7 3258 aa8.62□□□□□ -1.03
CTC1-212ENST00000584439 RANBP2P49792 3224 aaKnown RBP8.61□□□□□ -1.03
CTC1-212ENST00000584439 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
CTC1-212ENST00000584439 TRAK2O60296 914 aa8.61□□□□□ -1.03
CTC1-212ENST00000584439 TRPA1O75762 1119 aa8.61□□□□□ -1.03
CTC1-212ENST00000584439 FKBP4Q02790 459 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTC1-212ENST00000584439 GPC2Q8N158 579 aa8.61□□□□□ -1.03
CTC1-212ENST00000584439 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
CTC1-212ENST00000584439 GLIS2Q9BZE0 524 aaPredicted RBP8.61□□□□□ -1.03
CTC1-212ENST00000584439 ZNF408Q9H9D4 720 aa8.61□□□□□ -1.03
CTC1-212ENST00000584439 FAM155AB1AL88 458 aaPredicted RBP8.6□□□□□ -1.03
CTC1-212ENST00000584439 IARSP41252 1262 aaKnown RBP8.6□□□□□ -1.03
CTC1-212ENST00000584439 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
CTC1-212ENST00000584439 STYK1Q6J9G0 422 aa8.6□□□□□ -1.03
CTC1-212ENST00000584439 CNKSR1Q969H4 720 aa8.6□□□□□ -1.03
CTC1-212ENST00000584439 SNED1Q8TER0 1413 aa8.6□□□□□ -1.03
CTC1-212ENST00000584439 WASHC2AQ641Q2 1341 aa8.59□□□□□ -1.03
CTC1-212ENST00000584439 CANXP27824 592 aaKnown RBP8.59□□□□□ -1.03
CTC1-212ENST00000584439 EIF4A2Q14240 407 aaKnown RBP8.59□□□□□ -1.03
CTC1-212ENST00000584439 CCDC93Q567U6 631 aa8.59□□□□□ -1.03
CTC1-212ENST00000584439 ZNF530Q6P9A1 599 aaPredicted RBP8.59□□□□□ -1.03
CTC1-212ENST00000584439 CTU1Q7Z7A3 348 aaKnown RBP8.59□□□□□ -1.03
CTC1-212ENST00000584439 ZNF428Q96B54 188 aa8.59□□□□□ -1.03
CTC1-212ENST00000584439 MASTLQ96GX5 879 aa8.59□□□□□ -1.03
CTC1-212ENST00000584439 HHIPL1Q96JK4 782 aa8.59□□□□□ -1.03
CTC1-212ENST00000584439 RNF186Q9NXI6 227 aa8.59□□□□□ -1.03
CTC1-212ENST00000584439 ST20-MTHFSA0A0A6YYL1 179 aa8.58□□□□□ -1.04
CTC1-212ENST00000584439 A6NJR5 290 aa8.58□□□□□ -1.04
CTC1-212ENST00000584439 MTHFSP49914 203 aa8.58□□□□□ -1.04
CTC1-212ENST00000584439 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
CTC1-212ENST00000584439 FOXD4L5Q5VV16 416 aaPredicted RBP8.58□□□□□ -1.04
CTC1-212ENST00000584439 FOXD4L4Q8WXT5 416 aaPredicted RBP8.58□□□□□ -1.04
CTC1-212ENST00000584439 TESK2Q96S53 571 aa8.58□□□□□ -1.04
CTC1-212ENST00000584439 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
CTC1-212ENST00000584439 COLQQ9Y215 455 aaPredicted RBP8.58□□□□□ -1.04
CTC1-212ENST00000584439 TAF1P21675 1872 aa8.57□□□□□ -1.04
CTC1-212ENST00000584439 KIF23Q02241 960 aaPredicted RBP8.57□□□□□ -1.04
CTC1-212ENST00000584439 NOGQ13253 232 aa8.57□□□□□ -1.04
CTC1-212ENST00000584439 SOGA3Q5TF21 947 aa8.57□□□□□ -1.04
CTC1-212ENST00000584439 USP50Q70EL3 339 aaPredicted RBP8.57□□□□□ -1.04
CTC1-212ENST00000584439 GPIHBP1Q8IV16 184 aa8.57□□□□□ -1.04
CTC1-212ENST00000584439 SLC17A8Q8NDX2 589 aa8.57□□□□□ -1.04
CTC1-212ENST00000584439 PUS7Q96PZ0 661 aaKnown RBP8.57□□□□□ -1.04
CTC1-212ENST00000584439 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
CTC1-212ENST00000584439 SIPA1L3O60292 1781 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms