RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 ZNF219Q9P2Y4 722 aaPredicted RBP32.03■■■□□ 2.72
TTC39C-209ENST00000584250 ISCA1Q9BUE6 129 aa32.02■■■□□ 2.72
TTC39C-209ENST00000584250 PDZRN3Q9UPQ7 1066 aa32.02■■■□□ 2.72
TTC39C-209ENST00000584250 STYK1Q6J9G0 422 aa32.01■■■□□ 2.71
TTC39C-209ENST00000584250 PPP1R42Q7Z4L9 355 aa32.01■■■□□ 2.71
TTC39C-209ENST00000584250 UTP14AQ9BVJ6 771 aaKnown RBP32.01■■■□□ 2.71
TTC39C-209ENST00000584250 RIC3Q7Z5B4 369 aa32■■■□□ 2.71
TTC39C-209ENST00000584250 CDCA7LQ96GN5 454 aa32■■■□□ 2.71
TTC39C-209ENST00000584250 MASTLQ96GX5 879 aa32■■■□□ 2.71
TTC39C-209ENST00000584250 SLC4A2P04920 1241 aa31.99■■■□□ 2.71
TTC39C-209ENST00000584250 ZNF784Q8NCA9 323 aaPredicted RBP31.99■■■□□ 2.71
TTC39C-209ENST00000584250 STK31Q9BXU1 1019 aa31.99■■■□□ 2.71
TTC39C-209ENST00000584250 C21orf2O43822 256 aa31.97■■■□□ 2.71
TTC39C-209ENST00000584250 NPR1P16066 1061 aa31.97■■■□□ 2.71
TTC39C-209ENST00000584250 RASSF7Q02833 373 aa31.97■■■□□ 2.71
TTC39C-209ENST00000584250 PRPF40BQ6NWY9 871 aaKnown RBP31.97■■■□□ 2.71
TTC39C-209ENST00000584250 CRY2Q49AN0 593 aa31.96■■■□□ 2.71
TTC39C-209ENST00000584250 RIC1Q4ADV7 1423 aa31.96■■■□□ 2.71
TTC39C-209ENST00000584250 MYD88Q99836 296 aa31.96■■■□□ 2.71
TTC39C-209ENST00000584250 TRMT112Q9UI30 125 aaKnown RBP31.96■■■□□ 2.71
TTC39C-209ENST00000584250 ADCY9O60503 1353 aa31.95■■■□□ 2.71
TTC39C-209ENST00000584250 HCLS1P14317 486 aaPredicted RBP31.95■■■□□ 2.71
TTC39C-209ENST00000584250 PRELPP51888 382 aa31.95■■■□□ 2.71
TTC39C-209ENST00000584250 CNKSR1Q969H4 720 aa31.95■■■□□ 2.71
TTC39C-209ENST00000584250 CHMP4AQ9BY43 222 aa31.95■■■□□ 2.71
TTC39C-209ENST00000584250 SLFN5Q08AF3 891 aa31.94■■■□□ 2.7
TTC39C-209ENST00000584250 SLC10A5Q5PT55 438 aa31.94■■■□□ 2.7
TTC39C-209ENST00000584250 MAP3K2Q9Y2U5 619 aa31.94■■■□□ 2.7
TTC39C-209ENST00000584250 PI4KAP2A4QPH2 592 aa31.93■■■□□ 2.7
TTC39C-209ENST00000584250 OLFM4Q6UX06 510 aa31.93■■■□□ 2.7
TTC39C-209ENST00000584250 SLC51AQ86UW1 340 aa31.93■■■□□ 2.7
TTC39C-209ENST00000584250 PI4KAP1Q8N8J0 262 aa31.93■■■□□ 2.7
TTC39C-209ENST00000584250 LAMB2P55268 1798 aa31.92■■■□□ 2.7
TTC39C-209ENST00000584250 NFKBIEO00221 500 aa31.92■■■□□ 2.7
TTC39C-209ENST00000584250 RTL5Q5HYW3 569 aaPredicted RBP31.92■■■□□ 2.7
TTC39C-209ENST00000584250 FAM89AQ96GI7 184 aa31.92■■■□□ 2.7
TTC39C-209ENST00000584250 SBF1O95248 1867 aa31.92■■■□□ 2.7
TTC39C-209ENST00000584250 E9PSI1 815 aa31.91■■■□□ 2.7
TTC39C-209ENST00000584250 TRIM28Q13263 835 aaKnown RBP31.91■■■□□ 2.7
TTC39C-209ENST00000584250 KSR2Q6VAB6 950 aa31.91■■■□□ 2.7
TTC39C-209ENST00000584250 C7orf43Q8WVR3 580 aa31.91■■■□□ 2.7
TTC39C-209ENST00000584250 METTL22Q9BUU2 404 aaPredicted RBP31.91■■■□□ 2.7
TTC39C-209ENST00000584250 SH3TC1Q8TE82 1336 aa31.91■■■□□ 2.7
TTC39C-209ENST00000584250 DDX58O95786 925 aaKnown RBP31.9■■■□□ 2.7
TTC39C-209ENST00000584250 FLIIQ13045 1269 aa31.9■■■□□ 2.7
TTC39C-209ENST00000584250 C9orf131Q5VYM1 1079 aa31.9■■■□□ 2.7
TTC39C-209ENST00000584250 DDX60Q8IY21 1712 aaKnown RBP31.89■■■□□ 2.7
TTC39C-209ENST00000584250 JARID2Q92833 1246 aaPredicted RBP31.89■■■□□ 2.7
TTC39C-209ENST00000584250 NLRP3Q96P20 1036 aa31.88■■■□□ 2.69
TTC39C-209ENST00000584250 RNF123Q5XPI4 1314 aa31.88■■■□□ 2.69
TTC39C-209ENST00000584250 FER1L6Q2WGJ9 1857 aa31.88■■■□□ 2.69
TTC39C-209ENST00000584250 CACNA1FO60840 1977 aa31.88■■■□□ 2.69
TTC39C-209ENST00000584250 IGKV5-2P06315 115 aa31.87■■■□□ 2.69
TTC39C-209ENST00000584250 HOXA10P31260 410 aaPredicted RBP31.87■■■□□ 2.69
TTC39C-209ENST00000584250 RPGRQ92834 1020 aaKnown RBP31.87■■■□□ 2.69
TTC39C-209ENST00000584250 TRMT2AQ8IZ69 625 aaKnown RBP31.86■■■□□ 2.69
TTC39C-209ENST00000584250 CCDC88AQ3V6T2 1871 aa31.85■■■□□ 2.69
TTC39C-209ENST00000584250 RNF181Q9P0P0 153 aa31.85■■■□□ 2.69
TTC39C-209ENST00000584250 FKBP5Q13451 457 aaPredicted RBP31.84■■■□□ 2.69
TTC39C-209ENST00000584250 CWF19L2Q2TBE0 894 aaKnown RBP31.84■■■□□ 2.69
TTC39C-209ENST00000584250 ZNF526Q8TF50 670 aaPredicted RBP31.84■■■□□ 2.69
TTC39C-209ENST00000584250 TAF1P21675 1872 aa31.84■■■□□ 2.69
TTC39C-209ENST00000584250 ALDH1B1P30837 517 aa31.83■■■□□ 2.69
TTC39C-209ENST00000584250 CCDC191Q8NCU4 936 aa31.82■■■□□ 2.68
TTC39C-209ENST00000584250 CRAMP1Q96RY5 1269 aa31.82■■■□□ 2.68
TTC39C-209ENST00000584250 F6X3S4 739 aa31.81■■■□□ 2.68
TTC39C-209ENST00000584250 RBM17Q96I25 401 aaKnown RBP31.81■■■□□ 2.68
TTC39C-209ENST00000584250 CWC25Q9NXE8 425 aaPredicted RBP31.81■■■□□ 2.68
TTC39C-209ENST00000584250 COL4A1P02462 1669 aa31.8■■■□□ 2.68
TTC39C-209ENST00000584250 IRS4O14654 1257 aaPredicted RBP31.8■■■□□ 2.68
TTC39C-209ENST00000584250 ZBTB38Q8NAP3 1195 aaPredicted RBP31.8■■■□□ 2.68
TTC39C-209ENST00000584250 ABCC4O15439 1325 aa31.79■■■□□ 2.68
TTC39C-209ENST00000584250 DNAAF4Q8WXU2 420 aa31.79■■■□□ 2.68
TTC39C-209ENST00000584250 SNED1Q8TER0 1413 aa31.78■■■□□ 2.68
TTC39C-209ENST00000584250 NEURL1BA8MQ27 555 aa31.78■■■□□ 2.68
TTC39C-209ENST00000584250 PCCAP05165 728 aaPredicted RBP31.78■■■□□ 2.68
TTC39C-209ENST00000584250 LMNB1P20700 586 aa31.78■■■□□ 2.68
TTC39C-209ENST00000584250 CCDC93Q567U6 631 aa31.78■■■□□ 2.68
TTC39C-209ENST00000584250 HNRNPUQ00839 825 aaKnown RBP eCLIP31.77■■■□□ 2.68
TTC39C-209ENST00000584250 NEXNQ0ZGT2 675 aa31.76■■■□□ 2.67
TTC39C-209ENST00000584250 MRPL50Q8N5N7 158 aaKnown RBP31.76■■■□□ 2.67
TTC39C-209ENST00000584250 TAOK3Q9H2K8 898 aa31.76■■■□□ 2.67
TTC39C-209ENST00000584250 PPEF1O14829 653 aaPredicted RBP31.75■■■□□ 2.67
TTC39C-209ENST00000584250 SSH1Q8WYL5 1049 aa31.75■■■□□ 2.67
TTC39C-209ENST00000584250 BCL2L13Q9BXK5 485 aa31.75■■■□□ 2.67
TTC39C-209ENST00000584250 LTBP3Q9NS15 1303 aa31.75■■■□□ 2.67
TTC39C-209ENST00000584250 SF3B3Q15393 1217 aaKnown RBP31.74■■■□□ 2.67
TTC39C-209ENST00000584250 SOGA3Q5TF21 947 aa31.74■■■□□ 2.67
TTC39C-209ENST00000584250 TIAM2Q8IVF5 1701 aa31.72■■■□□ 2.67
TTC39C-209ENST00000584250 GCKRQ14397 625 aa31.71■■■□□ 2.67
TTC39C-209ENST00000584250 DDX46Q7L014 1031 aaKnown RBP31.71■■■□□ 2.67
TTC39C-209ENST00000584250 ZNF277Q9NRM2 450 aaPredicted RBP31.71■■■□□ 2.67
TTC39C-209ENST00000584250 FKBP4Q02790 459 aaKnown RBP eCLIP31.7■■■□□ 2.67
TTC39C-209ENST00000584250 LINS1Q8NG48 757 aa31.7■■■□□ 2.67
TTC39C-209ENST00000584250 CELF1Q92879 486 aaKnown RBP31.7■■■□□ 2.67
TTC39C-209ENST00000584250 CCDC85AQ96PX6 553 aaPredicted RBP31.7■■■□□ 2.67
TTC39C-209ENST00000584250 GPBP1L1Q9HC44 474 aaPredicted RBP31.7■■■□□ 2.67
TTC39C-209ENST00000584250 DICER1Q9UPY3 1922 aaKnown RBP31.7■■■□□ 2.67
TTC39C-209ENST00000584250 GRAPQ13588 217 aa31.69■■■□□ 2.66
TTC39C-209ENST00000584250 BEND3Q5T5X7 828 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms