RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 SLX4Q8IY92 1834 aa21.73■■□□□ 1.07
TSEN54-211ENST00000583818 C21orf2O43822 256 aa21.72■■□□□ 1.07
TSEN54-211ENST00000583818 PPP1R42Q7Z4L9 355 aa21.72■■□□□ 1.07
TSEN54-211ENST00000583818 MASTLQ96GX5 879 aa21.72■■□□□ 1.07
TSEN54-211ENST00000583818 MYH16Q9H6N6 1097 aa21.72■■□□□ 1.07
TSEN54-211ENST00000583818 IBTKQ9P2D0 1353 aaPredicted RBP21.72■■□□□ 1.07
TSEN54-211ENST00000583818 VAMP4O75379 141 aa21.71■■□□□ 1.07
TSEN54-211ENST00000583818 STYK1Q6J9G0 422 aa21.71■■□□□ 1.07
TSEN54-211ENST00000583818 PRPF40BQ6NWY9 871 aaKnown RBP21.71■■□□□ 1.07
TSEN54-211ENST00000583818 STK31Q9BXU1 1019 aa21.71■■□□□ 1.07
TSEN54-211ENST00000583818 PDZRN3Q9UPQ7 1066 aa21.71■■□□□ 1.07
TSEN54-211ENST00000583818 KLRG2A4D1S0 409 aaPredicted RBP21.7■■□□□ 1.06
TSEN54-211ENST00000583818 SLC4A2P04920 1241 aa21.7■■□□□ 1.06
TSEN54-211ENST00000583818 MYD88Q99836 296 aa21.7■■□□□ 1.06
TSEN54-211ENST00000583818 ISCA1Q9BUE6 129 aa21.7■■□□□ 1.06
TSEN54-211ENST00000583818 TRMT112Q9UI30 125 aaKnown RBP21.7■■□□□ 1.06
TSEN54-211ENST00000583818 HCLS1P14317 486 aaPredicted RBP21.69■■□□□ 1.06
TSEN54-211ENST00000583818 NPR1P16066 1061 aa21.69■■□□□ 1.06
TSEN54-211ENST00000583818 RTL5Q5HYW3 569 aaPredicted RBP21.69■■□□□ 1.06
TSEN54-211ENST00000583818 OLFM4Q6UX06 510 aa21.69■■□□□ 1.06
TSEN54-211ENST00000583818 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
TSEN54-211ENST00000583818 ZNF526Q8TF50 670 aaPredicted RBP21.69■■□□□ 1.06
TSEN54-211ENST00000583818 CNKSR1Q969H4 720 aa21.69■■□□□ 1.06
TSEN54-211ENST00000583818 CDCA7LQ96GN5 454 aa21.69■■□□□ 1.06
TSEN54-211ENST00000583818 ADCY9O60503 1353 aa21.67■■□□□ 1.06
TSEN54-211ENST00000583818 PRELPP51888 382 aa21.67■■□□□ 1.06
TSEN54-211ENST00000583818 C9orf131Q5VYM1 1079 aa21.67■■□□□ 1.06
TSEN54-211ENST00000583818 FAM89AQ96GI7 184 aa21.67■■□□□ 1.06
TSEN54-211ENST00000583818 MAP3K2Q9Y2U5 619 aa21.67■■□□□ 1.06
TSEN54-211ENST00000583818 PI4KAP2A4QPH2 592 aa21.66■■□□□ 1.06
TSEN54-211ENST00000583818 NFKBIEO00221 500 aa21.66■■□□□ 1.06
TSEN54-211ENST00000583818 CRY2Q49AN0 593 aa21.66■■□□□ 1.06
TSEN54-211ENST00000583818 PI4KAP1Q8N8J0 262 aa21.66■■□□□ 1.06
TSEN54-211ENST00000583818 JARID2Q92833 1246 aaPredicted RBP21.66■■□□□ 1.06
TSEN54-211ENST00000583818 RPGRQ92834 1020 aaKnown RBP21.66■■□□□ 1.06
TSEN54-211ENST00000583818 CHMP4AQ9BY43 222 aa21.66■■□□□ 1.06
TSEN54-211ENST00000583818 RIC1Q4ADV7 1423 aa21.65■■□□□ 1.06
TSEN54-211ENST00000583818 SH3TC1Q8TE82 1336 aa21.65■■□□□ 1.06
TSEN54-211ENST00000583818 DDX58O95786 925 aaKnown RBP21.65■■□□□ 1.06
TSEN54-211ENST00000583818 RNF181Q9P0P0 153 aa21.65■■□□□ 1.06
TSEN54-211ENST00000583818 LAMB2P55268 1798 aa21.65■■□□□ 1.06
TSEN54-211ENST00000583818 SBF1O95248 1867 aa21.64■■□□□ 1.06
TSEN54-211ENST00000583818 FLIIQ13045 1269 aa21.64■■□□□ 1.05
TSEN54-211ENST00000583818 SLC10A5Q5PT55 438 aa21.64■■□□□ 1.05
TSEN54-211ENST00000583818 KSR2Q6VAB6 950 aa21.64■■□□□ 1.05
TSEN54-211ENST00000583818 METTL22Q9BUU2 404 aaPredicted RBP21.64■■□□□ 1.05
TSEN54-211ENST00000583818 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
TSEN54-211ENST00000583818 NLRP3Q96P20 1036 aa21.63■■□□□ 1.05
TSEN54-211ENST00000583818 DDX60Q8IY21 1712 aaKnown RBP21.63■■□□□ 1.05
TSEN54-211ENST00000583818 E9PSI1 815 aa21.62■■□□□ 1.05
TSEN54-211ENST00000583818 FKBP5Q13451 457 aaPredicted RBP21.62■■□□□ 1.05
TSEN54-211ENST00000583818 C7orf43Q8WVR3 580 aa21.62■■□□□ 1.05
TSEN54-211ENST00000583818 FER1L6Q2WGJ9 1857 aa21.62■■□□□ 1.05
TSEN54-211ENST00000583818 RNF123Q5XPI4 1314 aa21.61■■□□□ 1.05
TSEN54-211ENST00000583818 CCDC88AQ3V6T2 1871 aa21.61■■□□□ 1.05
TSEN54-211ENST00000583818 IGKV5-2P06315 115 aa21.6■■□□□ 1.05
TSEN54-211ENST00000583818 ALDH1B1P30837 517 aa21.6■■□□□ 1.05
TSEN54-211ENST00000583818 HOXA10P31260 410 aaPredicted RBP21.6■■□□□ 1.05
TSEN54-211ENST00000583818 TRIM28Q13263 835 aaKnown RBP21.6■■□□□ 1.05
TSEN54-211ENST00000583818 CWF19L2Q2TBE0 894 aaKnown RBP21.6■■□□□ 1.05
TSEN54-211ENST00000583818 RBM17Q96I25 401 aaKnown RBP21.6■■□□□ 1.05
TSEN54-211ENST00000583818 TAF1P21675 1872 aa21.6■■□□□ 1.05
TSEN54-211ENST00000583818 CWC25Q9NXE8 425 aaPredicted RBP21.59■■□□□ 1.05
TSEN54-211ENST00000583818 ABCC4O15439 1325 aa21.58■■□□□ 1.05
TSEN54-211ENST00000583818 F6X3S4 739 aa21.58■■□□□ 1.05
TSEN54-211ENST00000583818 IRS4O14654 1257 aaPredicted RBP21.58■■□□□ 1.05
TSEN54-211ENST00000583818 LMNB1P20700 586 aa21.58■■□□□ 1.05
TSEN54-211ENST00000583818 CCDC93Q567U6 631 aa21.58■■□□□ 1.05
TSEN54-211ENST00000583818 CCDC191Q8NCU4 936 aa21.58■■□□□ 1.05
TSEN54-211ENST00000583818 TAOK3Q9H2K8 898 aa21.58■■□□□ 1.05
TSEN54-211ENST00000583818 COL4A1P02462 1669 aa21.57■■□□□ 1.04
TSEN54-211ENST00000583818 PPEF1O14829 653 aaPredicted RBP21.57■■□□□ 1.04
TSEN54-211ENST00000583818 ZBTB38Q8NAP3 1195 aaPredicted RBP21.57■■□□□ 1.04
TSEN54-211ENST00000583818 CRAMP1Q96RY5 1269 aa21.57■■□□□ 1.04
TSEN54-211ENST00000583818 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
TSEN54-211ENST00000583818 TIAM2Q8IVF5 1701 aa21.56■■□□□ 1.04
TSEN54-211ENST00000583818 NEXNQ0ZGT2 675 aa21.56■■□□□ 1.04
TSEN54-211ENST00000583818 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
TSEN54-211ENST00000583818 GPBP1L1Q9HC44 474 aaPredicted RBP21.56■■□□□ 1.04
TSEN54-211ENST00000583818 NEURL1BA8MQ27 555 aa21.55■■□□□ 1.04
TSEN54-211ENST00000583818 HNRNPUQ00839 825 aaKnown RBP eCLIP21.55■■□□□ 1.04
TSEN54-211ENST00000583818 SOGA3Q5TF21 947 aa21.55■■□□□ 1.04
TSEN54-211ENST00000583818 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
TSEN54-211ENST00000583818 CCDC85AQ96PX6 553 aaPredicted RBP21.55■■□□□ 1.04
TSEN54-211ENST00000583818 PCCAP05165 728 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-211ENST00000583818 TRMT2AQ8IZ69 625 aaKnown RBP21.54■■□□□ 1.04
TSEN54-211ENST00000583818 ZNF277Q9NRM2 450 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-211ENST00000583818 DDX46Q7L014 1031 aaKnown RBP21.53■■□□□ 1.04
TSEN54-211ENST00000583818 SNED1Q8TER0 1413 aa21.53■■□□□ 1.04
TSEN54-211ENST00000583818 LTBP3Q9NS15 1303 aa21.53■■□□□ 1.04
TSEN54-211ENST00000583818 FKBP4Q02790 459 aaKnown RBP eCLIP21.52■■□□□ 1.04
TSEN54-211ENST00000583818 MRPL50Q8N5N7 158 aaKnown RBP21.52■■□□□ 1.04
TSEN54-211ENST00000583818 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
TSEN54-211ENST00000583818 GRAPQ13588 217 aa21.51■■□□□ 1.03
TSEN54-211ENST00000583818 SF3B3Q15393 1217 aaKnown RBP21.51■■□□□ 1.03
TSEN54-211ENST00000583818 UBE3BQ7Z3V4 1068 aa21.51■■□□□ 1.03
TSEN54-211ENST00000583818 RTKN2Q8IZC4 609 aa21.51■■□□□ 1.03
TSEN54-211ENST00000583818 GRAPLQ8TC17 118 aaPredicted RBP21.51■■□□□ 1.03
TSEN54-211ENST00000583818 CELF1Q92879 486 aaKnown RBP21.51■■□□□ 1.03
TSEN54-211ENST00000583818 NMRK2Q9NPI5 230 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms