RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 OLFM4Q6UX06 510 aa14.99□□□□□ -0.01
CASC3-208ENST00000583649 CDC37L1Q7L3B6 337 aa14.99□□□□□ -0.01
CASC3-208ENST00000583649 TRPM7Q96QT4 1865 aa14.98□□□□□ -0.01
CASC3-208ENST00000583649 BTBD11A6QL63 1104 aa14.98□□□□□ -0.01
CASC3-208ENST00000583649 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
CASC3-208ENST00000583649 SOX10P56693 466 aa14.98□□□□□ -0.01
CASC3-208ENST00000583649 FMR1Q06787 632 aaKnown RBP eCLIP14.98□□□□□ -0.01
CASC3-208ENST00000583649 GPRC5DQ9NZD1 345 aa14.98□□□□□ -0.01
CASC3-208ENST00000583649 LTBP1Q14766 1721 aa14.97□□□□□ -0.01
CASC3-208ENST00000583649 CDHR2Q9BYE9 1310 aa14.97□□□□□ -0.01
CASC3-208ENST00000583649 FAM177BA6PVY3 158 aa14.97□□□□□ -0.01
CASC3-208ENST00000583649 SUPT20HQ8NEM7 779 aa14.97□□□□□ -0.01
CASC3-208ENST00000583649 CCDC102AQ96A19 550 aa14.97□□□□□ -0.01
CASC3-208ENST00000583649 PPIP5K2O43314 1243 aa14.96□□□□□ -0.01
CASC3-208ENST00000583649 SNRPA1P09661 255 aaKnown RBP14.96□□□□□ -0.01
CASC3-208ENST00000583649 RBM17Q96I25 401 aaKnown RBP14.96□□□□□ -0.01
CASC3-208ENST00000583649 BCL2L13Q9BXK5 485 aa14.96□□□□□ -0.01
CASC3-208ENST00000583649 HUNKP57058 714 aa14.95□□□□□ -0.02
CASC3-208ENST00000583649 TNIP1Q15025 636 aa14.95□□□□□ -0.02
CASC3-208ENST00000583649 REM2Q8IYK8 340 aaPredicted RBP14.95□□□□□ -0.02
CASC3-208ENST00000583649 TIMELESSQ9UNS1 1208 aa14.95□□□□□ -0.02
CASC3-208ENST00000583649 CASP8AP2Q9UKL3 1982 aa14.94□□□□□ -0.02
CASC3-208ENST00000583649 PDE4DIPQ5VU43 2346 aa14.94□□□□□ -0.02
CASC3-208ENST00000583649 PKN2Q16513 984 aaKnown RBP14.94□□□□□ -0.02
CASC3-208ENST00000583649 CRY2Q49AN0 593 aa14.94□□□□□ -0.02
CASC3-208ENST00000583649 IL17REQ8NFR9 667 aa14.94□□□□□ -0.02
CASC3-208ENST00000583649 GLIS2Q9BZE0 524 aaPredicted RBP14.94□□□□□ -0.02
CASC3-208ENST00000583649 ZNRF3Q9ULT6 936 aa14.94□□□□□ -0.02
CASC3-208ENST00000583649 BCORQ6W2J9 1755 aa14.93□□□□□ -0.02
CASC3-208ENST00000583649 H7C1D1 291 aa14.93□□□□□ -0.02
CASC3-208ENST00000583649 PPEF1O14829 653 aaPredicted RBP14.93□□□□□ -0.02
CASC3-208ENST00000583649 RGMBQ6NW40 437 aa14.93□□□□□ -0.02
CASC3-208ENST00000583649 CTU1Q7Z7A3 348 aaKnown RBP14.93□□□□□ -0.02
CASC3-208ENST00000583649 C2orf69Q8N8R5 385 aa14.93□□□□□ -0.02
CASC3-208ENST00000583649 PGAP2Q9UHJ9 254 aa14.93□□□□□ -0.02
CASC3-208ENST00000583649 KIF7Q2M1P5 1343 aa14.92□□□□□ -0.02
CASC3-208ENST00000583649 HOXA10P31260 410 aaPredicted RBP14.92□□□□□ -0.02
CASC3-208ENST00000583649 RTF1Q92541 710 aaKnown RBP14.92□□□□□ -0.02
CASC3-208ENST00000583649 CRAMP1Q96RY5 1269 aa14.92□□□□□ -0.02
CASC3-208ENST00000583649 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
CASC3-208ENST00000583649 NPC1L1Q9UHC9 1359 aa14.91□□□□□ -0.02
CASC3-208ENST00000583649 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
CASC3-208ENST00000583649 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
CASC3-208ENST00000583649 U2SURPO15042 1029 aaKnown RBP14.9□□□□□ -0.02
CASC3-208ENST00000583649 TRPA1O75762 1119 aa14.9□□□□□ -0.02
CASC3-208ENST00000583649 PIP4K2AP48426 406 aaPredicted RBP14.9□□□□□ -0.02
CASC3-208ENST00000583649 ZNF157P51786 506 aaPredicted RBP14.9□□□□□ -0.02
CASC3-208ENST00000583649 CXCL9Q07325 125 aa14.9□□□□□ -0.02
CASC3-208ENST00000583649 AOC3Q16853 763 aa14.9□□□□□ -0.02
CASC3-208ENST00000583649 KIF6Q6ZMV9 814 aa14.9□□□□□ -0.02
CASC3-208ENST00000583649 ERVV-1B6SEH8 477 aa14.89□□□□□ -0.03
CASC3-208ENST00000583649 TCERG1O14776 1098 aaKnown RBP14.89□□□□□ -0.03
CASC3-208ENST00000583649 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
CASC3-208ENST00000583649 SNED1Q8TER0 1413 aa14.89□□□□□ -0.03
CASC3-208ENST00000583649 TNRC18O15417 2968 aaPredicted RBP14.88□□□□□ -0.03
CASC3-208ENST00000583649 KIF23Q02241 960 aaPredicted RBP14.88□□□□□ -0.03
CASC3-208ENST00000583649 USP48Q86UV5 1035 aa14.88□□□□□ -0.03
CASC3-208ENST00000583649 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
CASC3-208ENST00000583649 NLRP3Q96P20 1036 aa14.88□□□□□ -0.03
CASC3-208ENST00000583649 GBA2Q9HCG7 927 aaPredicted RBP14.88□□□□□ -0.03
CASC3-208ENST00000583649 RNF186Q9NXI6 227 aa14.88□□□□□ -0.03
CASC3-208ENST00000583649 CEMIPQ8WUJ3 1361 aa14.87□□□□□ -0.03
CASC3-208ENST00000583649 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
CASC3-208ENST00000583649 PPP1R42Q7Z4L9 355 aa14.87□□□□□ -0.03
CASC3-208ENST00000583649 DCPSQ96C86 337 aaKnown RBP14.87□□□□□ -0.03
CASC3-208ENST00000583649 CNOT7Q9UIV1 285 aaKnown RBP14.87□□□□□ -0.03
CASC3-208ENST00000583649 ATP6V0A2Q9Y487 856 aa14.87□□□□□ -0.03
CASC3-208ENST00000583649 IBTKQ9P2D0 1353 aaPredicted RBP14.86□□□□□ -0.03
CASC3-208ENST00000583649 RIC1Q4ADV7 1423 aa14.86□□□□□ -0.03
CASC3-208ENST00000583649 HLFQ16534 295 aa14.86□□□□□ -0.03
CASC3-208ENST00000583649 KRT26Q7Z3Y9 468 aa14.86□□□□□ -0.03
CASC3-208ENST00000583649 HPS5Q9UPZ3 1129 aa14.86□□□□□ -0.03
CASC3-208ENST00000583649 KCNQ3O43525 872 aa14.85□□□□□ -0.03
CASC3-208ENST00000583649 BBOX1O75936 387 aa14.85□□□□□ -0.03
CASC3-208ENST00000583649 COL4A5P29400 1685 aa14.84□□□□□ -0.03
CASC3-208ENST00000583649 FAM155AB1AL88 458 aaPredicted RBP14.84□□□□□ -0.03
CASC3-208ENST00000583649 RAD17O75943 681 aa14.84□□□□□ -0.03
CASC3-208ENST00000583649 MPNDQ8N594 471 aa14.84□□□□□ -0.03
CASC3-208ENST00000583649 DPF2Q92785 391 aa14.84□□□□□ -0.03
CASC3-208ENST00000583649 ZIC5Q96T25 663 aa14.84□□□□□ -0.03
CASC3-208ENST00000583649 RTFDC1Q9BY42 306 aaPredicted RBP14.84□□□□□ -0.03
CASC3-208ENST00000583649 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
CASC3-208ENST00000583649 NBPF26B4DH59 902 aa14.83□□□□□ -0.04
CASC3-208ENST00000583649 HIRAP54198 1017 aaPredicted RBP14.83□□□□□ -0.04
CASC3-208ENST00000583649 KIAA2012Q0VF49 1180 aa14.83□□□□□ -0.04
CASC3-208ENST00000583649 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
CASC3-208ENST00000583649 NBPF10Q6P3W6 841 aaKnown RBP14.83□□□□□ -0.04
CASC3-208ENST00000583649 SULF1Q8IWU6 871 aa14.83□□□□□ -0.04
CASC3-208ENST00000583649 MICALL2Q8IY33 904 aa14.83□□□□□ -0.04
CASC3-208ENST00000583649 NGEFQ8N5V2 710 aa14.83□□□□□ -0.04
CASC3-208ENST00000583649 MAP3K15Q6ZN16 1313 aa14.83□□□□□ -0.04
CASC3-208ENST00000583649 PRAMEF22A3QJZ6 481 aa14.82□□□□□ -0.04
CASC3-208ENST00000583649 PARP10Q53GL7 1025 aa14.82□□□□□ -0.04
CASC3-208ENST00000583649 SP8Q8IXZ3 490 aa14.82□□□□□ -0.04
CASC3-208ENST00000583649 TRPM4Q8TD43 1214 aa14.82□□□□□ -0.04
CASC3-208ENST00000583649 SIPA1L3O60292 1781 aaPredicted RBP14.82□□□□□ -0.04
CASC3-208ENST00000583649 SLC10A3P09131 477 aa14.81□□□□□ -0.04
CASC3-208ENST00000583649 GPTP24298 496 aa14.81□□□□□ -0.04
CASC3-208ENST00000583649 RPS12P25398 132 aaKnown RBP14.81□□□□□ -0.04
CASC3-208ENST00000583649 HABP4Q5JVS0 413 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms