RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
ERBB2-215ENST00000583391 TNNQ9UQP3 1299 aa16.55■□□□□ 0.24
ERBB2-215ENST00000583391 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
ERBB2-215ENST00000583391 NTSR2O95665 410 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 TRIM27P14373 513 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 SUSD4Q5VX71 490 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 PRR5LQ6MZQ0 368 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 CCDC24Q8N4L8 307 aa16.54■□□□□ 0.24
ERBB2-215ENST00000583391 ABCC4O15439 1325 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 TAF1P21675 1872 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 NEURL1BA8MQ27 555 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 PPP1R42Q7Z4L9 355 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 LINS1Q8NG48 757 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 ARHGAP45Q92619 1136 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 CLUAP1Q96AJ1 413 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 NYXQ9GZU5 481 aa16.53■□□□□ 0.24
ERBB2-215ENST00000583391 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
ERBB2-215ENST00000583391 GTF2E1P29083 439 aaPredicted RBP16.52■□□□□ 0.24
ERBB2-215ENST00000583391 ST5P78524 1137 aa16.52■□□□□ 0.24
ERBB2-215ENST00000583391 CCDC191Q8NCU4 936 aa16.52■□□□□ 0.24
ERBB2-215ENST00000583391 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
ERBB2-215ENST00000583391 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.24
ERBB2-215ENST00000583391 PLIN1O60240 522 aa16.51■□□□□ 0.23
ERBB2-215ENST00000583391 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
ERBB2-215ENST00000583391 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
ERBB2-215ENST00000583391 RTL5Q5HYW3 569 aaPredicted RBP16.51■□□□□ 0.23
ERBB2-215ENST00000583391 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
ERBB2-215ENST00000583391 SRCIN1Q9C0H9 1055 aa16.51■□□□□ 0.23
ERBB2-215ENST00000583391 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
ERBB2-215ENST00000583391 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
ERBB2-215ENST00000583391 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
ERBB2-215ENST00000583391 RIC1Q4ADV7 1423 aa16.5■□□□□ 0.23
ERBB2-215ENST00000583391 ALDH1L1O75891 902 aa16.49■□□□□ 0.23
ERBB2-215ENST00000583391 GCKRQ14397 625 aa16.49■□□□□ 0.23
ERBB2-215ENST00000583391 SYNE4Q8N205 404 aa16.49■□□□□ 0.23
ERBB2-215ENST00000583391 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
ERBB2-215ENST00000583391 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
ERBB2-215ENST00000583391 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
ERBB2-215ENST00000583391 PCCAP05165 728 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-215ENST00000583391 RLBP1P12271 317 aa16.48■□□□□ 0.23
ERBB2-215ENST00000583391 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
ERBB2-215ENST00000583391 UBE3BQ7Z3V4 1068 aa16.48■□□□□ 0.23
ERBB2-215ENST00000583391 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
ERBB2-215ENST00000583391 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-215ENST00000583391 ZBTB38Q8NAP3 1195 aaPredicted RBP16.48■□□□□ 0.23
ERBB2-215ENST00000583391 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
ERBB2-215ENST00000583391 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
ERBB2-215ENST00000583391 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
ERBB2-215ENST00000583391 GOLGB1Q14789 3259 aaKnown RBP16.46■□□□□ 0.23
ERBB2-215ENST00000583391 HCLS1P14317 486 aaPredicted RBP16.46■□□□□ 0.23
ERBB2-215ENST00000583391 INTS3Q68E01 1043 aaKnown RBP16.46■□□□□ 0.23
ERBB2-215ENST00000583391 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
ERBB2-215ENST00000583391 C9orf78Q9NZ63 289 aaPredicted RBP16.46■□□□□ 0.23
ERBB2-215ENST00000583391 CD2APQ9Y5K6 639 aa16.46■□□□□ 0.23
ERBB2-215ENST00000583391 GRM8O00222 908 aa16.45■□□□□ 0.22
ERBB2-215ENST00000583391 IRS4O14654 1257 aaPredicted RBP16.45■□□□□ 0.22
ERBB2-215ENST00000583391 ITPRIPQ8IWB1 547 aa16.45■□□□□ 0.22
ERBB2-215ENST00000583391 NLGN2Q8NFZ4 835 aa16.45■□□□□ 0.22
ERBB2-215ENST00000583391 BRIP1Q9BX63 1249 aa16.45■□□□□ 0.22
ERBB2-215ENST00000583391 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
ERBB2-215ENST00000583391 CDHR2Q9BYE9 1310 aa16.45■□□□□ 0.22
ERBB2-215ENST00000583391 H7C1W4 665 aa16.44■□□□□ 0.22
ERBB2-215ENST00000583391 MS4A1P11836 297 aa16.44■□□□□ 0.22
ERBB2-215ENST00000583391 CASP7P55210 303 aa16.44■□□□□ 0.22
ERBB2-215ENST00000583391 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
ERBB2-215ENST00000583391 CHRNA5P30532 468 aa16.43■□□□□ 0.22
ERBB2-215ENST00000583391 PDE6BP35913 854 aa16.43■□□□□ 0.22
ERBB2-215ENST00000583391 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
ERBB2-215ENST00000583391 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
ERBB2-215ENST00000583391 COL4A1P02462 1669 aa16.43■□□□□ 0.22
ERBB2-215ENST00000583391 A0A1B0GUL6 1792 aa16.42■□□□□ 0.22
ERBB2-215ENST00000583391 NBPF7P0C2Y1 421 aaPredicted RBP16.42■□□□□ 0.22
ERBB2-215ENST00000583391 DPEP1P16444 411 aa16.42■□□□□ 0.22
ERBB2-215ENST00000583391 SLC10A5Q5PT55 438 aa16.42■□□□□ 0.22
ERBB2-215ENST00000583391 MEIS3Q99687 375 aa16.42■□□□□ 0.22
ERBB2-215ENST00000583391 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
ERBB2-215ENST00000583391 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
ERBB2-215ENST00000583391 A0A0G2JLW4 131 aa16.41■□□□□ 0.22
ERBB2-215ENST00000583391 PDE8AO60658 829 aa16.41■□□□□ 0.22
ERBB2-215ENST00000583391 TGFB2P61812 414 aa16.41■□□□□ 0.22
ERBB2-215ENST00000583391 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
ERBB2-215ENST00000583391 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
ERBB2-215ENST00000583391 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
ERBB2-215ENST00000583391 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
ERBB2-215ENST00000583391 UTYO14607 1347 aa16.41■□□□□ 0.22
ERBB2-215ENST00000583391 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
ERBB2-215ENST00000583391 H0YIN7 160 aa16.4■□□□□ 0.22
ERBB2-215ENST00000583391 CENPBP07199 599 aaPredicted RBP16.4■□□□□ 0.22
ERBB2-215ENST00000583391 UBTFL1P0CB47 393 aaPredicted RBP16.4■□□□□ 0.22
ERBB2-215ENST00000583391 HSP90B1P14625 803 aaKnown RBP16.4■□□□□ 0.22
ERBB2-215ENST00000583391 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
ERBB2-215ENST00000583391 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
ERBB2-215ENST00000583391 RPGRQ92834 1020 aaKnown RBP16.4■□□□□ 0.22
ERBB2-215ENST00000583391 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms